RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 MED1Q15648 1581 aaPredicted RBP11.21□□□□□ -0.61
CHD2-211ENST00000627460 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
CHD2-211ENST00000627460 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
CHD2-211ENST00000627460 HSP90AB2PQ58FF8 381 aa11.21□□□□□ -0.61
CHD2-211ENST00000627460 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
CHD2-211ENST00000627460 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
CHD2-211ENST00000627460 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
CHD2-211ENST00000627460 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.61
CHD2-211ENST00000627460 PEAK1Q9H792 1746 aa11.21□□□□□ -0.62
CHD2-211ENST00000627460 SOX12O15370 315 aa11.2□□□□□ -0.62
CHD2-211ENST00000627460 SULT6B1Q6IMI4 303 aa11.2□□□□□ -0.62
CHD2-211ENST00000627460 BRINP3Q76B58 766 aa11.2□□□□□ -0.62
CHD2-211ENST00000627460 LTN1O94822 1766 aa11.2□□□□□ -0.62
CHD2-211ENST00000627460 PXDNQ92626 1479 aa11.19□□□□□ -0.62
CHD2-211ENST00000627460 SPATA31A3Q5VYP0 1347 aa11.19□□□□□ -0.62
CHD2-211ENST00000627460 HTATSF1O43719 755 aaKnown RBP11.19□□□□□ -0.62
CHD2-211ENST00000627460 HMOX1P09601 288 aa11.19□□□□□ -0.62
CHD2-211ENST00000627460 FBLN1P23142 703 aa11.19□□□□□ -0.62
CHD2-211ENST00000627460 RRP1P56182 461 aaKnown RBP11.19□□□□□ -0.62
CHD2-211ENST00000627460 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
CHD2-211ENST00000627460 NUTM2GQ5VZR2 741 aa11.19□□□□□ -0.62
CHD2-211ENST00000627460 ARHGEF25Q86VW2 580 aa11.19□□□□□ -0.62
CHD2-211ENST00000627460 SOS2Q07890 1332 aaPredicted RBP11.18□□□□□ -0.62
CHD2-211ENST00000627460 GNAI1P63096 354 aa11.18□□□□□ -0.62
CHD2-211ENST00000627460 RRP7AQ9Y3A4 280 aaKnown RBP11.18□□□□□ -0.62
CHD2-211ENST00000627460 CPDO75976 1380 aa11.17□□□□□ -0.62
CHD2-211ENST00000627460 MS4A1P11836 297 aa11.17□□□□□ -0.62
CHD2-211ENST00000627460 RTF1Q92541 710 aaKnown RBP11.17□□□□□ -0.62
CHD2-211ENST00000627460 IFT57Q9NWB7 429 aa11.17□□□□□ -0.62
CHD2-211ENST00000627460 PPP4R2Q9NY27 417 aa11.17□□□□□ -0.62
CHD2-211ENST00000627460 TRIM35Q9UPQ4 493 aa11.17□□□□□ -0.62
CHD2-211ENST00000627460 EYA1Q99502 592 aa11.16□□□□□ -0.62
CHD2-211ENST00000627460 FAM208AQ9UK61 1670 aaKnown RBP11.16□□□□□ -0.62
CHD2-211ENST00000627460 NHSL1Q5SYE7 1610 aa11.16□□□□□ -0.62
CHD2-211ENST00000627460 SENP3-EIF4A1A0A087X0R7 540 aa11.15□□□□□ -0.62
CHD2-211ENST00000627460 PYGBP11216 843 aa11.15□□□□□ -0.62
CHD2-211ENST00000627460 XPCQ01831 940 aaPredicted RBP11.15□□□□□ -0.62
CHD2-211ENST00000627460 AAMPQ13685 434 aa11.15□□□□□ -0.62
CHD2-211ENST00000627460 AMOTQ4VCS5 1084 aa11.15□□□□□ -0.62
CHD2-211ENST00000627460 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
CHD2-211ENST00000627460 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
CHD2-211ENST00000627460 STK25O00506 426 aa11.14□□□□□ -0.63
CHD2-211ENST00000627460 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
CHD2-211ENST00000627460 BABAM1Q9NWV8 329 aa11.14□□□□□ -0.63
CHD2-211ENST00000627460 FANCIQ9NVI1 1328 aa11.13□□□□□ -0.63
CHD2-211ENST00000627460 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
CHD2-211ENST00000627460 LRRC59Q96AG4 307 aaKnown RBP11.13□□□□□ -0.63
CHD2-211ENST00000627460 PHACTR3Q96KR7 559 aa11.13□□□□□ -0.63
CHD2-211ENST00000627460 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
CHD2-211ENST00000627460 LTBP4Q8N2S1 1624 aa11.13□□□□□ -0.63
CHD2-211ENST00000627460 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
CHD2-211ENST00000627460 CAMTA1Q9Y6Y1 1673 aa11.12□□□□□ -0.63
CHD2-211ENST00000627460 TOM1O60784 492 aa11.12□□□□□ -0.63
CHD2-211ENST00000627460 CANXP27824 592 aaKnown RBP11.12□□□□□ -0.63
CHD2-211ENST00000627460 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
CHD2-211ENST00000627460 ALDH1L2Q3SY69 923 aa11.12□□□□□ -0.63
CHD2-211ENST00000627460 PLEKHO1Q53GL0 409 aaPredicted RBP11.12□□□□□ -0.63
CHD2-211ENST00000627460 AEBP1Q8IUX7 1158 aa11.12□□□□□ -0.63
CHD2-211ENST00000627460 ANKRD24Q8TF21 1146 aa11.12□□□□□ -0.63
CHD2-211ENST00000627460 AHDC1Q5TGY3 1603 aaPredicted RBP11.12□□□□□ -0.63
CHD2-211ENST00000627460 ERBB3P21860 1342 aa11.11□□□□□ -0.63
CHD2-211ENST00000627460 KIF16BQ96L93 1317 aa11.11□□□□□ -0.63
CHD2-211ENST00000627460 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
CHD2-211ENST00000627460 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
CHD2-211ENST00000627460 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
CHD2-211ENST00000627460 IPO8O15397 1037 aaKnown RBP11.11□□□□□ -0.63
CHD2-211ENST00000627460 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
CHD2-211ENST00000627460 CRYBG1Q9Y4K1 1723 aa11.11□□□□□ -0.63
CHD2-211ENST00000627460 DLG5Q8TDM6 1919 aa11.1□□□□□ -0.63
CHD2-211ENST00000627460 ZNF853P0CG23 659 aa11.1□□□□□ -0.63
CHD2-211ENST00000627460 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
CHD2-211ENST00000627460 CHMP4BQ9H444 224 aaKnown RBP11.1□□□□□ -0.63
CHD2-211ENST00000627460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.631e-6■■■□□ 17.8
CHD2-211ENST00000627460 MAP3K5Q99683 1374 aa11.1□□□□□ -0.63
CHD2-211ENST00000627460 OVOS2A0A0G2JMS6 1433 aa11.09□□□□□ -0.63
CHD2-211ENST00000627460 KIAA0232Q92628 1395 aa11.09□□□□□ -0.63
CHD2-211ENST00000627460 RARSP54136 660 aaKnown RBP11.09□□□□□ -0.63
CHD2-211ENST00000627460 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
CHD2-211ENST00000627460 RAPGEF4Q8WZA2 1011 aa11.09□□□□□ -0.63
CHD2-211ENST00000627460 PRDM11Q9NQV5 511 aa11.09□□□□□ -0.63
CHD2-211ENST00000627460 CSB-PGBD3P0DP91 1061 aa11.08□□□□□ -0.64
CHD2-211ENST00000627460 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHD2-211ENST00000627460 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
CHD2-211ENST00000627460 EXOSC9Q06265 439 aaKnown RBP11.08□□□□□ -0.64
CHD2-211ENST00000627460 MTHFSDQ2M296 383 aaKnown RBP11.08□□□□□ -0.64
CHD2-211ENST00000627460 AKAP4Q5JQC9 854 aa11.08□□□□□ -0.64
CHD2-211ENST00000627460 C1orf141Q5JVX7 400 aa11.08□□□□□ -0.64
CHD2-211ENST00000627460 NBPF6Q5VWK0 638 aa11.08□□□□□ -0.64
CHD2-211ENST00000627460 CCDC136Q96JN2 1154 aa11.08□□□□□ -0.64
CHD2-211ENST00000627460 NBPF4Q96M43 638 aa11.08□□□□□ -0.64
CHD2-211ENST00000627460 BCL11BQ9C0K0 894 aaPredicted RBP11.08□□□□□ -0.64
CHD2-211ENST00000627460 ROBO1Q9Y6N7 1651 aa11.08□□□□□ -0.64
CHD2-211ENST00000627460 CHL1O00533 1208 aa11.07□□□□□ -0.64
CHD2-211ENST00000627460 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
CHD2-211ENST00000627460 DDX17Q92841 729 aaKnown RBP11.07□□□□□ -0.64
CHD2-211ENST00000627460 TSPYL2Q9H2G4 693 aaPredicted RBP11.07□□□□□ -0.64
CHD2-211ENST00000627460 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
CHD2-211ENST00000627460 LAS1LQ9Y4W2 734 aaKnown RBP11.07□□□□□ -0.64
CHD2-211ENST00000627460 LMO7Q8WWI1 1683 aa11.07□□□□□ -0.64
CHD2-211ENST00000627460 COL18A1P39060 1754 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms