RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 NHSQ6T4R5 1651 aa19.94■□□□□ 0.78
PNKP-221ENST00000627317 SMG6Q86US8 1419 aaKnown RBP19.93■□□□□ 0.78
PNKP-221ENST00000627317 PPM1GO15355 546 aaPredicted RBP19.93■□□□□ 0.78
PNKP-221ENST00000627317 SHANK3Q9BYB0 1731 aa19.93■□□□□ 0.78
PNKP-221ENST00000627317 POLKQ9UBT6 870 aa19.92■□□□□ 0.78
PNKP-221ENST00000627317 MAP2P11137 1827 aaKnown RBP19.92■□□□□ 0.78
PNKP-221ENST00000627317 PLSCR1O15162 318 aa19.9■□□□□ 0.78
PNKP-221ENST00000627317 USHBP1Q8N6Y0 703 aa19.89■□□□□ 0.77
PNKP-221ENST00000627317 KCNQ2O43526 872 aa19.88■□□□□ 0.77
PNKP-221ENST00000627317 RALBP1Q15311 655 aa19.86■□□□□ 0.77
PNKP-221ENST00000627317 LRP5O75197 1615 aa19.85■□□□□ 0.77
PNKP-221ENST00000627317 PSDA5PKW4 1024 aaPredicted RBP19.85■□□□□ 0.77
PNKP-221ENST00000627317 PROM2Q8N271 834 aa19.85■□□□□ 0.77
PNKP-221ENST00000627317 PPP2R1AP30153 589 aa19.84■□□□□ 0.77
PNKP-221ENST00000627317 MTHFSP49914 203 aa19.84■□□□□ 0.77
PNKP-221ENST00000627317 ZCRB1Q8TBF4 217 aaKnown RBP19.84■□□□□ 0.77
PNKP-221ENST00000627317 PKD1L3Q7Z443 1732 aa19.83■□□□□ 0.77
PNKP-221ENST00000627317 R3HDM1Q15032 1099 aaKnown RBP19.83■□□□□ 0.77
PNKP-221ENST00000627317 ACSBG1Q96GR2 724 aa19.83■□□□□ 0.77
PNKP-221ENST00000627317 DDX54Q8TDD1 881 aaKnown RBP19.82■□□□□ 0.76
PNKP-221ENST00000627317 BTAF1O14981 1849 aa19.81■□□□□ 0.76
PNKP-221ENST00000627317 EIF4A2Q14240 407 aaKnown RBP19.81■□□□□ 0.76
PNKP-221ENST00000627317 RAPGEF4Q8WZA2 1011 aa19.81■□□□□ 0.76
PNKP-221ENST00000627317 EYA1Q99502 592 aa19.81■□□□□ 0.76
PNKP-221ENST00000627317 PRKRIP1Q9H875 184 aaPredicted RBP19.81■□□□□ 0.76
PNKP-221ENST00000627317 DOT1LQ8TEK3 1739 aa19.81■□□□□ 0.76
PNKP-221ENST00000627317 PAPPAQ13219 1627 aa19.8■□□□□ 0.76
PNKP-221ENST00000627317 ANP32CO43423 234 aa19.8■□□□□ 0.76
PNKP-221ENST00000627317 CFAP53Q96M91 514 aa19.8■□□□□ 0.76
PNKP-221ENST00000627317 ANO8Q9HCE9 1232 aaPredicted RBP19.8■□□□□ 0.76
PNKP-221ENST00000627317 MYBBP1AQ9BQG0 1328 aaKnown RBP19.79■□□□□ 0.76
PNKP-221ENST00000627317 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
PNKP-221ENST00000627317 PLEKHG2Q9H7P9 1386 aa19.79■□□□□ 0.76
PNKP-221ENST00000627317 IGSF1Q8N6C5 1336 aa19.78■□□□□ 0.76
PNKP-221ENST00000627317 TXNRD1Q16881 649 aa19.78■□□□□ 0.76
PNKP-221ENST00000627317 PCDH11XQ9BZA7 1347 aa19.77■□□□□ 0.76
PNKP-221ENST00000627317 PCDH11YQ9BZA8 1340 aa19.77■□□□□ 0.76
PNKP-221ENST00000627317 CYP27B1O15528 508 aa19.77■□□□□ 0.76
PNKP-221ENST00000627317 COL3A1P02461 1466 aaPredicted RBP19.75■□□□□ 0.75
PNKP-221ENST00000627317 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
PNKP-221ENST00000627317 NBPF14Q5TI25 921 aa19.75■□□□□ 0.75
PNKP-221ENST00000627317 TOGARAM1Q9Y4F4 1720 aa19.75■□□□□ 0.75
PNKP-221ENST00000627317 DIAPH1O60610 1272 aaKnown RBP19.74■□□□□ 0.75
PNKP-221ENST00000627317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.74■□□□□ 0.75
PNKP-221ENST00000627317 CASZ1Q86V15 1759 aa19.74■□□□□ 0.75
PNKP-221ENST00000627317 IL13P35225 146 aa19.72■□□□□ 0.75
PNKP-221ENST00000627317 LRRC4BQ9NT99 713 aa19.72■□□□□ 0.75
PNKP-221ENST00000627317 KDRP35968 1356 aa19.71■□□□□ 0.75
PNKP-221ENST00000627317 NKX1-1Q15270 411 aaPredicted RBP19.71■□□□□ 0.75
PNKP-221ENST00000627317 LY75O60449 1722 aa19.71■□□□□ 0.75
PNKP-221ENST00000627317 U2SURPO15042 1029 aaKnown RBP19.69■□□□□ 0.74
PNKP-221ENST00000627317 DIEXFQ68CQ4 756 aaKnown RBP19.69■□□□□ 0.74
PNKP-221ENST00000627317 SPG7Q9UQ90 795 aa19.69■□□□□ 0.74
PNKP-221ENST00000627317 NUDCQ9Y266 331 aa19.69■□□□□ 0.74
PNKP-221ENST00000627317 AEBP1Q8IUX7 1158 aa19.68■□□□□ 0.74
PNKP-221ENST00000627317 SYTL4Q96C24 671 aaPredicted RBP19.68■□□□□ 0.74
PNKP-221ENST00000627317 SLC15A2Q16348 729 aa19.67■□□□□ 0.74
PNKP-221ENST00000627317 SLC27A3Q5K4L6 730 aa19.67■□□□□ 0.74
PNKP-221ENST00000627317 PDGFDQ9GZP0 370 aaPredicted RBP19.67■□□□□ 0.74
PNKP-221ENST00000627317 PHKG2P15735 406 aa19.66■□□□□ 0.74
PNKP-221ENST00000627317 ZNF827Q17R98 1081 aa19.66■□□□□ 0.74
PNKP-221ENST00000627317 SULT6B1Q6IMI4 303 aa19.65■□□□□ 0.74
PNKP-221ENST00000627317 AKT1S1Q96B36 256 aa19.64■□□□□ 0.73
PNKP-221ENST00000627317 STK32BQ9NY57 414 aa19.64■□□□□ 0.73
PNKP-221ENST00000627317 HMOX1P09601 288 aa19.63■□□□□ 0.73
PNKP-221ENST00000627317 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
PNKP-221ENST00000627317 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.73
PNKP-221ENST00000627317 KDM6AO15550 1401 aaPredicted RBP19.62■□□□□ 0.73
PNKP-221ENST00000627317 KCNQ4P56696 695 aa19.62■□□□□ 0.73
PNKP-221ENST00000627317 IFNL2Q8IZJ0 200 aa19.62■□□□□ 0.73
PNKP-221ENST00000627317 ITGB4P16144 1822 aa19.62■□□□□ 0.73
PNKP-221ENST00000627317 PALLDQ8WX93 1383 aa19.61■□□□□ 0.73
PNKP-221ENST00000627317 PIGBQ92521 554 aa19.61■□□□□ 0.73
PNKP-221ENST00000627317 QSER1Q2KHR3 1735 aa19.6■□□□□ 0.73
PNKP-221ENST00000627317 WDR43Q15061 677 aaKnown RBP eCLIP19.6■□□□□ 0.73
PNKP-221ENST00000627317 MPRIPQ6WCQ1 1025 aa19.6■□□□□ 0.73
PNKP-221ENST00000627317 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
PNKP-221ENST00000627317 AMOTQ4VCS5 1084 aa19.59■□□□□ 0.73
PNKP-221ENST00000627317 SPON1Q9HCB6 807 aa19.59■□□□□ 0.73
PNKP-221ENST00000627317 CCNL1Q9UK58 526 aaPredicted RBP19.59■□□□□ 0.73
PNKP-221ENST00000627317 PTGER2P43116 358 aa19.58■□□□□ 0.72
PNKP-221ENST00000627317 PLEKHO1Q53GL0 409 aaPredicted RBP19.58■□□□□ 0.72
PNKP-221ENST00000627317 TUBGCP6Q96RT7 1819 aa19.58■□□□□ 0.72
PNKP-221ENST00000627317 C5P01031 1676 aa19.57■□□□□ 0.72
PNKP-221ENST00000627317 PNPLA7Q6ZV29 1317 aa19.56■□□□□ 0.72
PNKP-221ENST00000627317 ZBTB7AO95365 584 aa19.56■□□□□ 0.72
PNKP-221ENST00000627317 CCDC184Q52MB2 194 aa19.56■□□□□ 0.72
PNKP-221ENST00000627317 ZNF530Q6P9A1 599 aaPredicted RBP19.56■□□□□ 0.72
PNKP-221ENST00000627317 DCAF5Q96JK2 942 aa19.56■□□□□ 0.72
PNKP-221ENST00000627317 SGIP1Q9BQI5 828 aa19.56■□□□□ 0.72
PNKP-221ENST00000627317 RSPH6AQ9H0K4 717 aa19.56■□□□□ 0.72
PNKP-221ENST00000627317 KAT6BQ8WYB5 2073 aa19.56■□□□□ 0.72
PNKP-221ENST00000627317 PRKAR2BP31323 418 aa19.55■□□□□ 0.72
PNKP-221ENST00000627317 SMARCC1Q92922 1105 aaPredicted RBP19.55■□□□□ 0.72
PNKP-221ENST00000627317 TMOD3Q9NYL9 352 aa19.55■□□□□ 0.72
PNKP-221ENST00000627317 ERVV-2B6SEH9 535 aa19.54■□□□□ 0.72
PNKP-221ENST00000627317 FCHSD2O94868 740 aa19.54■□□□□ 0.72
PNKP-221ENST00000627317 HSP90AB1P08238 724 aaKnown RBP19.54■□□□□ 0.72
PNKP-221ENST00000627317 ADAMTS7Q9UKP4 1686 aa19.53■□□□□ 0.72
PNKP-221ENST00000627317 NEFMP07197 916 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms