RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
CHD2-210ENST00000627200 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
CHD2-210ENST00000627200 FLT4P35916 1363 aa13.1□□□□□ -0.31
CHD2-210ENST00000627200 PTGER2P43116 358 aa13.1□□□□□ -0.31
CHD2-210ENST00000627200 KCNQ4P56696 695 aa13.1□□□□□ -0.31
CHD2-210ENST00000627200 SYTL4Q96C24 671 aaPredicted RBP13.1□□□□□ -0.31
CHD2-210ENST00000627200 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
CHD2-210ENST00000627200 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
CHD2-210ENST00000627200 EMILIN1Q9Y6C2 1016 aa13.1□□□□□ -0.31
CHD2-210ENST00000627200 SMG6Q86US8 1419 aaKnown RBP13.1□□□□□ -0.31
CHD2-210ENST00000627200 INSRP06213 1382 aa13.09□□□□□ -0.31
CHD2-210ENST00000627200 PRIM1P49642 420 aaKnown RBP13.09□□□□□ -0.31
CHD2-210ENST00000627200 POLR3GLQ9BT43 218 aa13.09□□□□□ -0.31
CHD2-210ENST00000627200 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
CHD2-210ENST00000627200 LY75O60449 1722 aa13.08□□□□□ -0.32
CHD2-210ENST00000627200 ZCRB1Q8TBF4 217 aaKnown RBP13.08□□□□□ -0.32
CHD2-210ENST00000627200 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
CHD2-210ENST00000627200 PPM1GO15355 546 aaPredicted RBP13.06□□□□□ -0.32
CHD2-210ENST00000627200 RAPGEF4Q8WZA2 1011 aa13.06□□□□□ -0.32
CHD2-210ENST00000627200 PKD1L3Q7Z443 1732 aa13.05□□□□□ -0.32
CHD2-210ENST00000627200 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
CHD2-210ENST00000627200 CCER1Q8TC90 406 aaPredicted RBP13.05□□□□□ -0.32
CHD2-210ENST00000627200 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
CHD2-210ENST00000627200 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
CHD2-210ENST00000627200 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
CHD2-210ENST00000627200 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
CHD2-210ENST00000627200 NCAPD2Q15021 1401 aa13.05□□□□□ -0.32
CHD2-210ENST00000627200 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
CHD2-210ENST00000627200 MTFR1LQ9H019 292 aa13.04□□□□□ -0.32
CHD2-210ENST00000627200 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
CHD2-210ENST00000627200 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
CHD2-210ENST00000627200 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
CHD2-210ENST00000627200 SLC27A3Q5K4L6 730 aa13.03□□□□□ -0.32
CHD2-210ENST00000627200 FHDC1Q9C0D6 1143 aaPredicted RBP13.03□□□□□ -0.32
CHD2-210ENST00000627200 PCDH11XQ9BZA7 1347 aa13.03□□□□□ -0.32
CHD2-210ENST00000627200 PCDH11YQ9BZA8 1340 aa13.03□□□□□ -0.32
CHD2-210ENST00000627200 CYP27B1O15528 508 aa13.02□□□□□ -0.33
CHD2-210ENST00000627200 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHD2-210ENST00000627200 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
CHD2-210ENST00000627200 POLKQ9UBT6 870 aa13.01□□□□□ -0.33
CHD2-210ENST00000627200 CCNL1Q9UK58 526 aaPredicted RBP13.01□□□□□ -0.33
CHD2-210ENST00000627200 C5P01031 1676 aa13.01□□□□□ -0.33
CHD2-210ENST00000627200 ITGB4P16144 1822 aa13.01□□□□□ -0.33
CHD2-210ENST00000627200 WASHC2AQ641Q2 1341 aa13□□□□□ -0.33
CHD2-210ENST00000627200 EYA1Q99502 592 aa13□□□□□ -0.33
CHD2-210ENST00000627200 COL24A1Q17RW2 1714 aa12.99□□□□□ -0.33
CHD2-210ENST00000627200 PALLDQ8WX93 1383 aa12.99□□□□□ -0.33
CHD2-210ENST00000627200 YY1P25490 414 aa12.99□□□□□ -0.33
CHD2-210ENST00000627200 ARXQ96QS3 562 aa12.99□□□□□ -0.33
CHD2-210ENST00000627200 SYT17Q9BSW7 474 aa12.99□□□□□ -0.33
CHD2-210ENST00000627200 PANK3Q9H999 370 aa12.99□□□□□ -0.33
CHD2-210ENST00000627200 TFCP2L1Q9NZI6 479 aa12.99□□□□□ -0.33
CHD2-210ENST00000627200 TAF1LQ8IZX4 1826 aa12.98□□□□□ -0.33
CHD2-210ENST00000627200 EIF4A2Q14240 407 aaKnown RBP12.98□□□□□ -0.33
CHD2-210ENST00000627200 MPRIPQ6WCQ1 1025 aa12.98□□□□□ -0.33
CHD2-210ENST00000627200 UTRNP46939 3433 aa12.97□□□□□ -0.33
CHD2-210ENST00000627200 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
CHD2-210ENST00000627200 C4BP0C0L5 1744 aa12.96□□□□□ -0.34
CHD2-210ENST00000627200 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
CHD2-210ENST00000627200 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
CHD2-210ENST00000627200 COL23A1Q86Y22 540 aaPredicted RBP12.95□□□□□ -0.34
CHD2-210ENST00000627200 PIGBQ92521 554 aa12.95□□□□□ -0.34
CHD2-210ENST00000627200 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
CHD2-210ENST00000627200 MSH5O43196 834 aa12.94□□□□□ -0.34
CHD2-210ENST00000627200 SMIM5Q71RC9 77 aa12.94□□□□□ -0.34
CHD2-210ENST00000627200 AMIGO3Q86WK7 504 aa12.94□□□□□ -0.34
CHD2-210ENST00000627200 SLC16A10Q8TF71 515 aa12.94□□□□□ -0.34
CHD2-210ENST00000627200 SPG7Q9UQ90 795 aa12.94□□□□□ -0.34
CHD2-210ENST00000627200 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
CHD2-210ENST00000627200 PHKG2P15735 406 aa12.93□□□□□ -0.34
CHD2-210ENST00000627200 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
CHD2-210ENST00000627200 POLD1P28340 1107 aa12.92□□□□□ -0.34
CHD2-210ENST00000627200 AEBP1Q8IUX7 1158 aa12.92□□□□□ -0.34
CHD2-210ENST00000627200 NLGN2Q8NFZ4 835 aa12.92□□□□□ -0.34
CHD2-210ENST00000627200 KIF7Q2M1P5 1343 aa12.91□□□□□ -0.34
CHD2-210ENST00000627200 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
CHD2-210ENST00000627200 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
CHD2-210ENST00000627200 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.91□□□□□ -0.348e-19■□□□□ 10.7
CHD2-210ENST00000627200 ASAP1Q9ULH1 1129 aa12.91□□□□□ -0.34
CHD2-210ENST00000627200 PHF14O94880 888 aa12.9□□□□□ -0.34
CHD2-210ENST00000627200 IFNL2Q8IZJ0 200 aa12.9□□□□□ -0.34
CHD2-210ENST00000627200 LINC00116Q8NCU8 138 aa12.9□□□□□ -0.34
CHD2-210ENST00000627200 TMOD3Q9NYL9 352 aa12.9□□□□□ -0.34
CHD2-210ENST00000627200 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
CHD2-210ENST00000627200 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
CHD2-210ENST00000627200 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
CHD2-210ENST00000627200 SIK1P57059 783 aa12.89□□□□□ -0.35
CHD2-210ENST00000627200 ITPK1Q13572 414 aa12.89□□□□□ -0.35
CHD2-210ENST00000627200 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
CHD2-210ENST00000627200 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
CHD2-210ENST00000627200 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
CHD2-210ENST00000627200 AK7Q96M32 723 aa12.88□□□□□ -0.35
CHD2-210ENST00000627200 ATG3Q9NT62 314 aa12.88□□□□□ -0.35
CHD2-210ENST00000627200 KNSTRNQ9Y448 316 aa12.88□□□□□ -0.35
CHD2-210ENST00000627200 KDRP35968 1356 aa12.88□□□□□ -0.35
CHD2-210ENST00000627200 GPR162Q16538 588 aa12.87□□□□□ -0.35
CHD2-210ENST00000627200 CHD4Q14839 1912 aa12.87□□□□□ -0.35
CHD2-210ENST00000627200 PLEKHG2Q9H7P9 1386 aa12.86□□□□□ -0.35
CHD2-210ENST00000627200 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.86□□□□□ -0.35
CHD2-210ENST00000627200 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms