RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 UTRNP46939 3433 aa18.9■□□□□ 0.62
SOX2-OT-241ENST00000626948 SGIP1Q9BQI5 828 aa18.89■□□□□ 0.61
SOX2-OT-241ENST00000626948 STK32BQ9NY57 414 aa18.89■□□□□ 0.61
SOX2-OT-241ENST00000626948 EMILIN1Q9Y6C2 1016 aa18.89■□□□□ 0.61
SOX2-OT-241ENST00000626948 INSRP06213 1382 aa18.89■□□□□ 0.61
SOX2-OT-241ENST00000626948 ANKRD26Q9UPS8 1709 aa18.88■□□□□ 0.61
SOX2-OT-241ENST00000626948 KCNQ4P56696 695 aa18.88■□□□□ 0.61
SOX2-OT-241ENST00000626948 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
SOX2-OT-241ENST00000626948 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
SOX2-OT-241ENST00000626948 LY75O60449 1722 aa18.88■□□□□ 0.61
SOX2-OT-241ENST00000626948 PRIM1P49642 420 aaKnown RBP18.87■□□□□ 0.61
SOX2-OT-241ENST00000626948 CDCA8Q53HL2 280 aa18.87■□□□□ 0.61
SOX2-OT-241ENST00000626948 TUBGCP6Q96RT7 1819 aa18.87■□□□□ 0.61
SOX2-OT-241ENST00000626948 FLT4P35916 1363 aa18.86■□□□□ 0.61
SOX2-OT-241ENST00000626948 AKT1S1Q96B36 256 aa18.86■□□□□ 0.61
SOX2-OT-241ENST00000626948 NCAPD2Q15021 1401 aa18.84■□□□□ 0.61
SOX2-OT-241ENST00000626948 KIF24Q5T7B8 1368 aa18.84■□□□□ 0.61
SOX2-OT-241ENST00000626948 MAP2P11137 1827 aaKnown RBP18.84■□□□□ 0.61
SOX2-OT-241ENST00000626948 TOGARAM1Q9Y4F4 1720 aa18.84■□□□□ 0.61
SOX2-OT-241ENST00000626948 PPP1R1BQ9UD71 204 aaPredicted RBP18.84■□□□□ 0.61
SOX2-OT-241ENST00000626948 QSER1Q2KHR3 1735 aa18.83■□□□□ 0.6
SOX2-OT-241ENST00000626948 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
SOX2-OT-241ENST00000626948 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
SOX2-OT-241ENST00000626948 PKD1L3Q7Z443 1732 aa18.82■□□□□ 0.6
SOX2-OT-241ENST00000626948 COL24A1Q17RW2 1714 aa18.81■□□□□ 0.6
SOX2-OT-241ENST00000626948 CYP27B1O15528 508 aa18.81■□□□□ 0.6
SOX2-OT-241ENST00000626948 MTFR1LQ9H019 292 aa18.81■□□□□ 0.6
SOX2-OT-241ENST00000626948 PNPLA7Q6ZV29 1317 aa18.8■□□□□ 0.6
SOX2-OT-241ENST00000626948 POLKQ9UBT6 870 aa18.8■□□□□ 0.6
SOX2-OT-241ENST00000626948 SMG6Q86US8 1419 aaKnown RBP18.8■□□□□ 0.6
SOX2-OT-241ENST00000626948 CGNL1Q0VF96 1302 aa18.79■□□□□ 0.6
SOX2-OT-241ENST00000626948 SLC27A3Q5K4L6 730 aa18.79■□□□□ 0.6
SOX2-OT-241ENST00000626948 RAPGEF4Q8WZA2 1011 aa18.79■□□□□ 0.6
SOX2-OT-241ENST00000626948 WASHC2AQ641Q2 1341 aa18.78■□□□□ 0.6
SOX2-OT-241ENST00000626948 TATP17735 454 aaPredicted RBP18.78■□□□□ 0.6
SOX2-OT-241ENST00000626948 FHDC1Q9C0D6 1143 aaPredicted RBP18.78■□□□□ 0.6
SOX2-OT-241ENST00000626948 ITGB4P16144 1822 aa18.78■□□□□ 0.6
SOX2-OT-241ENST00000626948 EYA1Q99502 592 aa18.77■□□□□ 0.6
SOX2-OT-241ENST00000626948 SYT17Q9BSW7 474 aa18.77■□□□□ 0.6
SOX2-OT-241ENST00000626948 GOLGB1Q14789 3259 aaKnown RBP18.76■□□□□ 0.59
SOX2-OT-241ENST00000626948 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
SOX2-OT-241ENST00000626948 POLR3GLQ9BT43 218 aa18.76■□□□□ 0.59
SOX2-OT-241ENST00000626948 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.59
SOX2-OT-241ENST00000626948 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
SOX2-OT-241ENST00000626948 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
SOX2-OT-241ENST00000626948 TAF1LQ8IZX4 1826 aa18.74■□□□□ 0.59
SOX2-OT-241ENST00000626948 C5P01031 1676 aa18.73■□□□□ 0.59
SOX2-OT-241ENST00000626948 CCER1Q8TC90 406 aaPredicted RBP18.73■□□□□ 0.59
SOX2-OT-241ENST00000626948 PANK3Q9H999 370 aa18.73■□□□□ 0.59
SOX2-OT-241ENST00000626948 CCNL1Q9UK58 526 aaPredicted RBP18.73■□□□□ 0.59
SOX2-OT-241ENST00000626948 TNNT2P45379 298 aaPredicted RBP18.72■□□□□ 0.59
SOX2-OT-241ENST00000626948 EIF4A2Q14240 407 aaKnown RBP18.72■□□□□ 0.59
SOX2-OT-241ENST00000626948 ARXQ96QS3 562 aa18.72■□□□□ 0.59
SOX2-OT-241ENST00000626948 NKX1-1Q15270 411 aaPredicted RBP18.71■□□□□ 0.59
SOX2-OT-241ENST00000626948 AMIGO3Q86WK7 504 aa18.71■□□□□ 0.59
SOX2-OT-241ENST00000626948 YY1P25490 414 aa18.7■□□□□ 0.58
SOX2-OT-241ENST00000626948 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
SOX2-OT-241ENST00000626948 COL23A1Q86Y22 540 aaPredicted RBP18.7■□□□□ 0.58
SOX2-OT-241ENST00000626948 TFCP2L1Q9NZI6 479 aa18.7■□□□□ 0.58
SOX2-OT-241ENST00000626948 PALLDQ8WX93 1383 aa18.69■□□□□ 0.58
SOX2-OT-241ENST00000626948 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
SOX2-OT-241ENST00000626948 PIGBQ92521 554 aa18.69■□□□□ 0.58
SOX2-OT-241ENST00000626948 SLC16A10Q8TF71 515 aa18.68■□□□□ 0.58
SOX2-OT-241ENST00000626948 SMIM5Q71RC9 77 aa18.67■□□□□ 0.58
SOX2-OT-241ENST00000626948 IGSF1Q8N6C5 1336 aa18.66■□□□□ 0.58
SOX2-OT-241ENST00000626948 C4BP0C0L5 1744 aa18.66■□□□□ 0.58
SOX2-OT-241ENST00000626948 PHKG2P15735 406 aa18.65■□□□□ 0.58
SOX2-OT-241ENST00000626948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.65■□□□□ 0.58
SOX2-OT-241ENST00000626948 UBR3Q6ZT12 1888 aa18.65■□□□□ 0.58
SOX2-OT-241ENST00000626948 SPG7Q9UQ90 795 aa18.64■□□□□ 0.57
SOX2-OT-241ENST00000626948 NLGN2Q8NFZ4 835 aa18.63■□□□□ 0.57
SOX2-OT-241ENST00000626948 MSL1Q68DK7 614 aa18.62■□□□□ 0.57
SOX2-OT-241ENST00000626948 ASAP1Q9ULH1 1129 aa18.62■□□□□ 0.57
SOX2-OT-241ENST00000626948 KIF7Q2M1P5 1343 aa18.61■□□□□ 0.57
SOX2-OT-241ENST00000626948 AMER1Q5JTC6 1135 aaPredicted RBP18.61■□□□□ 0.57
SOX2-OT-241ENST00000626948 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
SOX2-OT-241ENST00000626948 LINC00116Q8NCU8 138 aa18.61■□□□□ 0.57
SOX2-OT-241ENST00000626948 ITPK1Q13572 414 aa18.6■□□□□ 0.57
SOX2-OT-241ENST00000626948 IFNL2Q8IZJ0 200 aa18.6■□□□□ 0.57
SOX2-OT-241ENST00000626948 KDM6AO15550 1401 aaPredicted RBP18.59■□□□□ 0.57
SOX2-OT-241ENST00000626948 CHD4Q14839 1912 aa18.59■□□□□ 0.57
SOX2-OT-241ENST00000626948 SLC4A9Q96Q91 983 aa18.59■□□□□ 0.57
SOX2-OT-241ENST00000626948 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
SOX2-OT-241ENST00000626948 LOC102724428A0A0B4J2F2 783 aa18.58■□□□□ 0.56
SOX2-OT-241ENST00000626948 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
SOX2-OT-241ENST00000626948 POLD1P28340 1107 aa18.58■□□□□ 0.56
SOX2-OT-241ENST00000626948 SIK1P57059 783 aa18.58■□□□□ 0.56
SOX2-OT-241ENST00000626948 MORC1Q86VD1 984 aa18.58■□□□□ 0.56
SOX2-OT-241ENST00000626948 SMARCC1Q92922 1105 aaPredicted RBP18.58■□□□□ 0.56
SOX2-OT-241ENST00000626948 KDRP35968 1356 aa18.57■□□□□ 0.56
SOX2-OT-241ENST00000626948 PLEKHG2Q9H7P9 1386 aa18.57■□□□□ 0.56
SOX2-OT-241ENST00000626948 PER1O15534 1290 aaPredicted RBP18.57■□□□□ 0.56
SOX2-OT-241ENST00000626948 KLHL34Q8N239 644 aa18.57■□□□□ 0.56
SOX2-OT-241ENST00000626948 TMOD3Q9NYL9 352 aa18.57■□□□□ 0.56
SOX2-OT-241ENST00000626948 MSH5O43196 834 aa18.56■□□□□ 0.56
SOX2-OT-241ENST00000626948 IL13P35225 146 aa18.56■□□□□ 0.56
SOX2-OT-241ENST00000626948 ZNF784Q8NCA9 323 aaPredicted RBP18.55■□□□□ 0.56
SOX2-OT-241ENST00000626948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.54■□□□□ 0.56
SOX2-OT-241ENST00000626948 YBX3P16989 372 aaKnown RBP eCLIP18.54■□□□□ 0.56
SOX2-OT-241ENST00000626948 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms