RNA–Protein interactions for RNA: ENST00000626188.1

CHRNA4-208, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 441 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-208ENST00000626188 HDGFL2Q7Z4V5 671 aaPredicted RBP22■■□□□ 1.11
CHRNA4-208ENST00000626188 TMC1Q8TDI8 760 aa22■■□□□ 1.11
CHRNA4-208ENST00000626188 L3MBTL2Q969R5 705 aa22■■□□□ 1.11
CHRNA4-208ENST00000626188 CD2APQ9Y5K6 639 aa21.99■■□□□ 1.11
CHRNA4-208ENST00000626188 USP47Q96K76 1375 aa21.99■■□□□ 1.11
CHRNA4-208ENST00000626188 SBNO2Q9Y2G9 1366 aa21.99■■□□□ 1.11
CHRNA4-208ENST00000626188 USP54Q70EL1 1684 aa21.98■■□□□ 1.11
CHRNA4-208ENST00000626188 IP6K1Q92551 441 aa21.98■■□□□ 1.11
CHRNA4-208ENST00000626188 DOT1LQ8TEK3 1739 aa21.97■■□□□ 1.11
CHRNA4-208ENST00000626188 NSD2O96028 1365 aa21.97■■□□□ 1.11
CHRNA4-208ENST00000626188 LY75O60449 1722 aa21.97■■□□□ 1.11
CHRNA4-208ENST00000626188 ZCRB1Q8TBF4 217 aaKnown RBP21.96■■□□□ 1.11
CHRNA4-208ENST00000626188 ADCY9O60503 1353 aa21.95■■□□□ 1.1
CHRNA4-208ENST00000626188 CD163L1Q9NR16 1453 aa21.94■■□□□ 1.1
CHRNA4-208ENST00000626188 EDC4Q6P2E9 1401 aaKnown RBP21.93■■□□□ 1.1
CHRNA4-208ENST00000626188 FLAD1Q8NFF5 587 aa21.93■■□□□ 1.1
CHRNA4-208ENST00000626188 FAM208AQ9UK61 1670 aaKnown RBP21.93■■□□□ 1.1
CHRNA4-208ENST00000626188 WWC3Q9ULE0 1092 aa21.92■■□□□ 1.1
CHRNA4-208ENST00000626188 HMGB2P26583 209 aaKnown RBP21.91■■□□□ 1.1
CHRNA4-208ENST00000626188 SLC12A5Q9H2X9 1139 aa21.91■■□□□ 1.1
CHRNA4-208ENST00000626188 TERF2IPQ9NYB0 399 aa21.91■■□□□ 1.1
CHRNA4-208ENST00000626188 AMPHP49418 695 aa21.9■■□□□ 1.1
CHRNA4-208ENST00000626188 IGSF1Q8N6C5 1336 aa21.88■■□□□ 1.09
CHRNA4-208ENST00000626188 MEGF6O75095 1541 aa21.87■■□□□ 1.09
CHRNA4-208ENST00000626188 HOXC9P31274 260 aa21.87■■□□□ 1.09
CHRNA4-208ENST00000626188 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
CHRNA4-208ENST00000626188 COG3Q96JB2 828 aa21.86■■□□□ 1.09
CHRNA4-208ENST00000626188 C5P01031 1676 aa21.85■■□□□ 1.09
CHRNA4-208ENST00000626188 MAP3K19Q56UN5 1328 aa21.85■■□□□ 1.09
CHRNA4-208ENST00000626188 KIF3CO14782 793 aa21.85■■□□□ 1.09
CHRNA4-208ENST00000626188 APLP1P51693 650 aa21.85■■□□□ 1.09
CHRNA4-208ENST00000626188 AK7Q96M32 723 aa21.85■■□□□ 1.09
CHRNA4-208ENST00000626188 NEUROD1Q13562 356 aa21.84■■□□□ 1.09
CHRNA4-208ENST00000626188 RAPGEF4Q8WZA2 1011 aa21.84■■□□□ 1.09
CHRNA4-208ENST00000626188 PALLDQ8WX93 1383 aa21.84■■□□□ 1.09
CHRNA4-208ENST00000626188 PHF14O94880 888 aa21.83■■□□□ 1.09
CHRNA4-208ENST00000626188 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
CHRNA4-208ENST00000626188 CGNL1Q0VF96 1302 aa21.82■■□□□ 1.08
CHRNA4-208ENST00000626188 MPRIPQ6WCQ1 1025 aa21.82■■□□□ 1.08
CHRNA4-208ENST00000626188 USHBP1Q8N6Y0 703 aa21.82■■□□□ 1.08
CHRNA4-208ENST00000626188 FBLN1P23142 703 aa21.81■■□□□ 1.08
CHRNA4-208ENST00000626188 CARD11Q9BXL7 1154 aa21.81■■□□□ 1.08
CHRNA4-208ENST00000626188 TATP17735 454 aaPredicted RBP21.8■■□□□ 1.08
CHRNA4-208ENST00000626188 NBPF6Q5VWK0 638 aa21.8■■□□□ 1.08
CHRNA4-208ENST00000626188 NBPF4Q96M43 638 aa21.8■■□□□ 1.08
CHRNA4-208ENST00000626188 RGPD2P0DJD1 1756 aa21.79■■□□□ 1.08
CHRNA4-208ENST00000626188 SMARCC1Q92922 1105 aaPredicted RBP21.78■■□□□ 1.08
CHRNA4-208ENST00000626188 SMG6Q86US8 1419 aaKnown RBP21.78■■□□□ 1.08
CHRNA4-208ENST00000626188 NSD3Q9BZ95 1437 aa21.78■■□□□ 1.08
CHRNA4-208ENST00000626188 PCDH11XQ9BZA7 1347 aa21.78■■□□□ 1.08
CHRNA4-208ENST00000626188 PCDH11YQ9BZA8 1340 aa21.78■■□□□ 1.08
CHRNA4-208ENST00000626188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.77■■□□□ 1.08
CHRNA4-208ENST00000626188 TOMM70O94826 608 aa21.77■■□□□ 1.08
CHRNA4-208ENST00000626188 C4BP0C0L5 1744 aa21.77■■□□□ 1.08
CHRNA4-208ENST00000626188 SMIM5Q71RC9 77 aa21.76■■□□□ 1.07
CHRNA4-208ENST00000626188 AMIGO3Q86WK7 504 aa21.76■■□□□ 1.07
CHRNA4-208ENST00000626188 TAF1LQ8IZX4 1826 aa21.76■■□□□ 1.07
CHRNA4-208ENST00000626188 RTL1A6NKG5 1358 aa21.75■■□□□ 1.07
CHRNA4-208ENST00000626188 RRS1Q15050 365 aaKnown RBP21.75■■□□□ 1.07
CHRNA4-208ENST00000626188 DNAJC5GQ8N7S2 189 aa21.75■■□□□ 1.07
CHRNA4-208ENST00000626188 PUS7Q96PZ0 661 aaKnown RBP21.74■■□□□ 1.07
CHRNA4-208ENST00000626188 SSFA2P28290 1259 aa21.73■■□□□ 1.07
CHRNA4-208ENST00000626188 TOGARAM1Q9Y4F4 1720 aa21.7■■□□□ 1.06
CHRNA4-208ENST00000626188 BCS1LQ9Y276 419 aa21.7■■□□□ 1.06
CHRNA4-208ENST00000626188 CICQ96RK0 1608 aaPredicted RBP21.69■■□□□ 1.06
CHRNA4-208ENST00000626188 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
CHRNA4-208ENST00000626188 CYP27B1O15528 508 aa21.69■■□□□ 1.06
CHRNA4-208ENST00000626188 GNPATO15228 680 aa21.68■■□□□ 1.06
CHRNA4-208ENST00000626188 CAPN15O75808 1086 aa21.68■■□□□ 1.06
CHRNA4-208ENST00000626188 ARHGAP27Q6ZUM4 889 aa21.68■■□□□ 1.06
CHRNA4-208ENST00000626188 C16orf71Q8IYS4 520 aaPredicted RBP21.68■■□□□ 1.06
CHRNA4-208ENST00000626188 LINC00116Q8NCU8 138 aa21.68■■□□□ 1.06
CHRNA4-208ENST00000626188 PIGBQ92521 554 aa21.68■■□□□ 1.06
CHRNA4-208ENST00000626188 NMRK2Q9NPI5 230 aa21.68■■□□□ 1.06
CHRNA4-208ENST00000626188 LOC102724428A0A0B4J2F2 783 aa21.67■■□□□ 1.06
CHRNA4-208ENST00000626188 MMP10P09238 476 aa21.67■■□□□ 1.06
CHRNA4-208ENST00000626188 SIK1P57059 783 aa21.67■■□□□ 1.06
CHRNA4-208ENST00000626188 HSP90AB2PQ58FF8 381 aa21.66■■□□□ 1.06
CHRNA4-208ENST00000626188 GGNBP2Q9H3C7 697 aa21.66■■□□□ 1.06
CHRNA4-208ENST00000626188 PXDNLA1KZ92 1463 aa21.65■■□□□ 1.06
CHRNA4-208ENST00000626188 A0A0G2JLW4 131 aa21.65■■□□□ 1.06
CHRNA4-208ENST00000626188 TGFB2P61812 414 aa21.65■■□□□ 1.06
CHRNA4-208ENST00000626188 COL13A1Q5TAT6 717 aaPredicted RBP21.65■■□□□ 1.06
CHRNA4-208ENST00000626188 INSRP06213 1382 aa21.64■■□□□ 1.06
CHRNA4-208ENST00000626188 RBM46Q8TBY0 533 aaKnown RBP21.64■■□□□ 1.05
CHRNA4-208ENST00000626188 KLRG1Q96E93 195 aa21.64■■□□□ 1.05
CHRNA4-208ENST00000626188 ATP6V1AP38606 617 aa21.63■■□□□ 1.05
CHRNA4-208ENST00000626188 HTRA3P83110 453 aa21.63■■□□□ 1.05
CHRNA4-208ENST00000626188 TMOD3Q9NYL9 352 aa21.63■■□□□ 1.05
CHRNA4-208ENST00000626188 ITGB4P16144 1822 aa21.63■■□□□ 1.05
CHRNA4-208ENST00000626188 WDR90Q96KV7 1748 aa21.63■■□□□ 1.05
CHRNA4-208ENST00000626188 FYB1O15117 783 aa21.62■■□□□ 1.05
CHRNA4-208ENST00000626188 FCHSD2O94868 740 aa21.62■■□□□ 1.05
CHRNA4-208ENST00000626188 FLT4P35916 1363 aa21.61■■□□□ 1.05
CHRNA4-208ENST00000626188 SPG7Q9UQ90 795 aa21.61■■□□□ 1.05
CHRNA4-208ENST00000626188 ITPK1Q13572 414 aa21.6■■□□□ 1.05
CHRNA4-208ENST00000626188 TNS4Q8IZW8 715 aa21.6■■□□□ 1.05
CHRNA4-208ENST00000626188 NLGN1Q8N2Q7 840 aa21.6■■□□□ 1.05
CHRNA4-208ENST00000626188 N4BP2Q86UW6 1770 aaPredicted RBP21.59■■□□□ 1.05
CHRNA4-208ENST00000626188 TMF1P82094 1093 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms