RNA–Protein interactions for RNA: ENST00000625854.1

LEMD1-209, Transcript of LEM domain containing 1, humanhuman

TSL 4

Gene LEMD1, Length 516 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-209ENST00000625854 CDCA8Q53HL2 280 aa12.31□□□□□ -0.44
LEMD1-209ENST00000625854 SLC27A3Q5K4L6 730 aa12.31□□□□□ -0.44
LEMD1-209ENST00000625854 NBPF6Q5VWK0 638 aa12.31□□□□□ -0.44
LEMD1-209ENST00000625854 RAPGEF4Q8WZA2 1011 aa12.31□□□□□ -0.44
LEMD1-209ENST00000625854 NBPF4Q96M43 638 aa12.31□□□□□ -0.44
LEMD1-209ENST00000625854 TFCP2L1Q9NZI6 479 aa12.31□□□□□ -0.44
LEMD1-209ENST00000625854 FAM208AQ9UK61 1670 aaKnown RBP12.31□□□□□ -0.44
LEMD1-209ENST00000625854 USP47Q96K76 1375 aa12.3□□□□□ -0.44
LEMD1-209ENST00000625854 PPM1GO15355 546 aaPredicted RBP12.29□□□□□ -0.44
LEMD1-209ENST00000625854 TATP17735 454 aaPredicted RBP12.29□□□□□ -0.44
LEMD1-209ENST00000625854 POLD1P28340 1107 aa12.29□□□□□ -0.44
LEMD1-209ENST00000625854 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
LEMD1-209ENST00000625854 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
LEMD1-209ENST00000625854 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
LEMD1-209ENST00000625854 POLR3GLQ9BT43 218 aa12.29□□□□□ -0.44
LEMD1-209ENST00000625854 GPR162Q16538 588 aa12.28□□□□□ -0.44
LEMD1-209ENST00000625854 SGIP1Q9BQI5 828 aa12.28□□□□□ -0.44
LEMD1-209ENST00000625854 CCNL1Q9UK58 526 aaPredicted RBP12.28□□□□□ -0.44
LEMD1-209ENST00000625854 DOT1LQ8TEK3 1739 aa12.28□□□□□ -0.44
LEMD1-209ENST00000625854 SMG6Q86US8 1419 aaKnown RBP12.28□□□□□ -0.44
LEMD1-209ENST00000625854 SLC16A10Q8TF71 515 aa12.27□□□□□ -0.45
LEMD1-209ENST00000625854 MEGF6O75095 1541 aa12.27□□□□□ -0.45
LEMD1-209ENST00000625854 KIF20BQ96Q89 1820 aa12.26□□□□□ -0.45
LEMD1-209ENST00000625854 MPRIPQ6WCQ1 1025 aa12.26□□□□□ -0.45
LEMD1-209ENST00000625854 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
LEMD1-209ENST00000625854 RTL1A6NKG5 1358 aa12.26□□□□□ -0.45
LEMD1-209ENST00000625854 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
LEMD1-209ENST00000625854 CHD4Q14839 1912 aa12.25□□□□□ -0.45
LEMD1-209ENST00000625854 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
LEMD1-209ENST00000625854 CGNL1Q0VF96 1302 aa12.25□□□□□ -0.45
LEMD1-209ENST00000625854 INSRP06213 1382 aa12.24□□□□□ -0.45
LEMD1-209ENST00000625854 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
LEMD1-209ENST00000625854 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
LEMD1-209ENST00000625854 NSD2O96028 1365 aa12.23□□□□□ -0.45
LEMD1-209ENST00000625854 PCDH11XQ9BZA7 1347 aa12.23□□□□□ -0.45
LEMD1-209ENST00000625854 PCDH11YQ9BZA8 1340 aa12.23□□□□□ -0.45
LEMD1-209ENST00000625854 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
LEMD1-209ENST00000625854 TUBGCP6Q96RT7 1819 aa12.23□□□□□ -0.45
LEMD1-209ENST00000625854 LY75O60449 1722 aa12.23□□□□□ -0.45
LEMD1-209ENST00000625854 NSD3Q9BZ95 1437 aa12.22□□□□□ -0.45
LEMD1-209ENST00000625854 FLT4P35916 1363 aa12.22□□□□□ -0.45
LEMD1-209ENST00000625854 MSL1Q68DK7 614 aa12.22□□□□□ -0.45
LEMD1-209ENST00000625854 COL23A1Q86Y22 540 aaPredicted RBP12.22□□□□□ -0.45
LEMD1-209ENST00000625854 QSER1Q2KHR3 1735 aa12.22□□□□□ -0.45
LEMD1-209ENST00000625854 MAP2P11137 1827 aaKnown RBP12.21□□□□□ -0.45
LEMD1-209ENST00000625854 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.45
LEMD1-209ENST00000625854 CYP27B1O15528 508 aa12.2□□□□□ -0.46
LEMD1-209ENST00000625854 NLGN2Q8NFZ4 835 aa12.2□□□□□ -0.46
LEMD1-209ENST00000625854 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
LEMD1-209ENST00000625854 ITGB4P16144 1822 aa12.19□□□□□ -0.46
LEMD1-209ENST00000625854 HMGB2P26583 209 aaKnown RBP12.19□□□□□ -0.46
LEMD1-209ENST00000625854 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
LEMD1-209ENST00000625854 TIMELESSQ9UNS1 1208 aa12.19□□□□□ -0.46
LEMD1-209ENST00000625854 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
LEMD1-209ENST00000625854 PALLDQ8WX93 1383 aa12.18□□□□□ -0.46
LEMD1-209ENST00000625854 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
LEMD1-209ENST00000625854 PIGBQ92521 554 aa12.18□□□□□ -0.46
LEMD1-209ENST00000625854 AK7Q96M32 723 aa12.18□□□□□ -0.46
LEMD1-209ENST00000625854 EYA1Q99502 592 aa12.18□□□□□ -0.46
LEMD1-209ENST00000625854 WASHC2AQ641Q2 1341 aa12.17□□□□□ -0.46
LEMD1-209ENST00000625854 PHF14O94880 888 aa12.17□□□□□ -0.46
LEMD1-209ENST00000625854 FLAD1Q8NFF5 587 aa12.17□□□□□ -0.46
LEMD1-209ENST00000625854 C5P01031 1676 aa12.16□□□□□ -0.46
LEMD1-209ENST00000625854 SMIM5Q71RC9 77 aa12.16□□□□□ -0.46
LEMD1-209ENST00000625854 TMOD3Q9NYL9 352 aa12.16□□□□□ -0.46
LEMD1-209ENST00000625854 POLKQ9UBT6 870 aa12.16□□□□□ -0.46
LEMD1-209ENST00000625854 TAF1LQ8IZX4 1826 aa12.16□□□□□ -0.46
LEMD1-209ENST00000625854 COL24A1Q17RW2 1714 aa12.15□□□□□ -0.46
LEMD1-209ENST00000625854 IFNL2Q8IZJ0 200 aa12.15□□□□□ -0.46
LEMD1-209ENST00000625854 GRIN3BO60391 1043 aa12.14□□□□□ -0.47
LEMD1-209ENST00000625854 YBX3P16989 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
LEMD1-209ENST00000625854 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
LEMD1-209ENST00000625854 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
LEMD1-209ENST00000625854 PANK3Q9H999 370 aa12.14□□□□□ -0.47
LEMD1-209ENST00000625854 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
LEMD1-209ENST00000625854 SENP3-EIF4A1A0A087X0R7 540 aa12.13□□□□□ -0.47
LEMD1-209ENST00000625854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
LEMD1-209ENST00000625854 LOC102724428A0A0B4J2F2 783 aa12.13□□□□□ -0.47
LEMD1-209ENST00000625854 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
LEMD1-209ENST00000625854 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
LEMD1-209ENST00000625854 SIK1P57059 783 aa12.13□□□□□ -0.47
LEMD1-209ENST00000625854 EIF4A2Q14240 407 aaKnown RBP12.13□□□□□ -0.47
LEMD1-209ENST00000625854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.47
LEMD1-209ENST00000625854 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
LEMD1-209ENST00000625854 TOGARAM1Q9Y4F4 1720 aa12.13□□□□□ -0.47
LEMD1-209ENST00000625854 PKD1L3Q7Z443 1732 aa12.12□□□□□ -0.47
LEMD1-209ENST00000625854 PHKG2P15735 406 aa12.12□□□□□ -0.47
LEMD1-209ENST00000625854 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
LEMD1-209ENST00000625854 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
LEMD1-209ENST00000625854 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
LEMD1-209ENST00000625854 RBM42Q9BTD8 480 aaKnown RBP12.12□□□□□ -0.47
LEMD1-209ENST00000625854 CD2APQ9Y5K6 639 aa12.12□□□□□ -0.47
LEMD1-209ENST00000625854 CLSPNQ9HAW4 1339 aa12.11□□□□□ -0.47
LEMD1-209ENST00000625854 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
LEMD1-209ENST00000625854 GNPATO15228 680 aa12.11□□□□□ -0.47
LEMD1-209ENST00000625854 GIGYF1O75420 1035 aaPredicted RBP12.11□□□□□ -0.47
LEMD1-209ENST00000625854 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
LEMD1-209ENST00000625854 ITPK1Q13572 414 aa12.1□□□□□ -0.47
LEMD1-209ENST00000625854 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
LEMD1-209ENST00000625854 MORC1Q86VD1 984 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms