RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 HSP90AB2PQ58FF8 381 aa19.09■□□□□ 0.65
USH1C-211ENST00000624811 ZCRB1Q8TBF4 217 aaKnown RBP19.09■□□□□ 0.65
USH1C-211ENST00000624811 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
USH1C-211ENST00000624811 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.64
USH1C-211ENST00000624811 LRRC4BQ9NT99 713 aa19.07■□□□□ 0.64
USH1C-211ENST00000624811 MAP2P11137 1827 aaKnown RBP19.07■□□□□ 0.64
USH1C-211ENST00000624811 KCNQ4P56696 695 aa19.06■□□□□ 0.64
USH1C-211ENST00000624811 ZNF827Q17R98 1081 aa19.06■□□□□ 0.64
USH1C-211ENST00000624811 FLT4P35916 1363 aa19.06■□□□□ 0.64
USH1C-211ENST00000624811 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
USH1C-211ENST00000624811 TUBGCP6Q96RT7 1819 aa19.05■□□□□ 0.64
USH1C-211ENST00000624811 PPM1GO15355 546 aaPredicted RBP19.05■□□□□ 0.64
USH1C-211ENST00000624811 RAPGEF4Q8WZA2 1011 aa19.05■□□□□ 0.64
USH1C-211ENST00000624811 EMILIN1Q9Y6C2 1016 aa19.05■□□□□ 0.64
USH1C-211ENST00000624811 LY75O60449 1722 aa19.05■□□□□ 0.64
USH1C-211ENST00000624811 INSRP06213 1382 aa19.05■□□□□ 0.64
USH1C-211ENST00000624811 PTGER2P43116 358 aa19.04■□□□□ 0.64
USH1C-211ENST00000624811 TATP17735 454 aaPredicted RBP19.03■□□□□ 0.64
USH1C-211ENST00000624811 NSD2O96028 1365 aa19.03■□□□□ 0.64
USH1C-211ENST00000624811 CCER1Q8TC90 406 aaPredicted RBP19.02■□□□□ 0.64
USH1C-211ENST00000624811 MTFR1LQ9H019 292 aa19.02■□□□□ 0.64
USH1C-211ENST00000624811 ANKRD26Q9UPS8 1709 aa19.02■□□□□ 0.63
USH1C-211ENST00000624811 QSER1Q2KHR3 1735 aa19.01■□□□□ 0.63
USH1C-211ENST00000624811 DCAF8L1A6NGE4 600 aa19.01■□□□□ 0.63
USH1C-211ENST00000624811 SLC27A3Q5K4L6 730 aa19■□□□□ 0.63
USH1C-211ENST00000624811 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
USH1C-211ENST00000624811 KIF24Q5T7B8 1368 aa18.99■□□□□ 0.63
USH1C-211ENST00000624811 HSPA5P11021 654 aaKnown RBP18.99■□□□□ 0.63
USH1C-211ENST00000624811 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
USH1C-211ENST00000624811 ITGB4P16144 1822 aa18.98■□□□□ 0.63
USH1C-211ENST00000624811 TOGARAM1Q9Y4F4 1720 aa18.98■□□□□ 0.63
USH1C-211ENST00000624811 YY1P25490 414 aa18.98■□□□□ 0.63
USH1C-211ENST00000624811 TNNT2P45379 298 aaPredicted RBP18.98■□□□□ 0.63
USH1C-211ENST00000624811 FHDC1Q9C0D6 1143 aaPredicted RBP18.98■□□□□ 0.63
USH1C-211ENST00000624811 PCDH11XQ9BZA7 1347 aa18.98■□□□□ 0.63
USH1C-211ENST00000624811 PCDH11YQ9BZA8 1340 aa18.98■□□□□ 0.63
USH1C-211ENST00000624811 PKD1L3Q7Z443 1732 aa18.97■□□□□ 0.63
USH1C-211ENST00000624811 EIF4G2P78344 907 aaKnown RBP eCLIP18.97■□□□□ 0.63
USH1C-211ENST00000624811 SGIP1Q9BQI5 828 aa18.97■□□□□ 0.63
USH1C-211ENST00000624811 TFCP2L1Q9NZI6 479 aa18.97■□□□□ 0.63
USH1C-211ENST00000624811 CCNL1Q9UK58 526 aaPredicted RBP18.97■□□□□ 0.63
USH1C-211ENST00000624811 ARXQ96QS3 562 aa18.96■□□□□ 0.63
USH1C-211ENST00000624811 PNPLA7Q6ZV29 1317 aa18.96■□□□□ 0.63
USH1C-211ENST00000624811 SYT17Q9BSW7 474 aa18.95■□□□□ 0.62
USH1C-211ENST00000624811 C5P01031 1676 aa18.95■□□□□ 0.62
USH1C-211ENST00000624811 CYP27B1O15528 508 aa18.94■□□□□ 0.62
USH1C-211ENST00000624811 MPRIPQ6WCQ1 1025 aa18.94■□□□□ 0.62
USH1C-211ENST00000624811 KLHL34Q8N239 644 aa18.93■□□□□ 0.62
USH1C-211ENST00000624811 POLKQ9UBT6 870 aa18.93■□□□□ 0.62
USH1C-211ENST00000624811 WASHC2AQ641Q2 1341 aa18.93■□□□□ 0.62
USH1C-211ENST00000624811 TAF1LQ8IZX4 1826 aa18.93■□□□□ 0.62
USH1C-211ENST00000624811 MSH5O43196 834 aa18.92■□□□□ 0.62
USH1C-211ENST00000624811 EYA1Q99502 592 aa18.92■□□□□ 0.62
USH1C-211ENST00000624811 PANK3Q9H999 370 aa18.92■□□□□ 0.62
USH1C-211ENST00000624811 COL24A1Q17RW2 1714 aa18.91■□□□□ 0.62
USH1C-211ENST00000624811 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
USH1C-211ENST00000624811 PALLDQ8WX93 1383 aa18.9■□□□□ 0.62
USH1C-211ENST00000624811 POLD1P28340 1107 aa18.89■□□□□ 0.61
USH1C-211ENST00000624811 SPG7Q9UQ90 795 aa18.89■□□□□ 0.61
USH1C-211ENST00000624811 EIF4A2Q14240 407 aaKnown RBP18.88■□□□□ 0.61
USH1C-211ENST00000624811 SLC16A10Q8TF71 515 aa18.88■□□□□ 0.61
USH1C-211ENST00000624811 COL23A1Q86Y22 540 aaPredicted RBP18.87■□□□□ 0.61
USH1C-211ENST00000624811 CHD4Q14839 1912 aa18.86■□□□□ 0.61
USH1C-211ENST00000624811 MSL1Q68DK7 614 aa18.85■□□□□ 0.61
USH1C-211ENST00000624811 PIGBQ92521 554 aa18.85■□□□□ 0.61
USH1C-211ENST00000624811 C4BP0C0L5 1744 aa18.85■□□□□ 0.61
USH1C-211ENST00000624811 MAP3K5Q99683 1374 aa18.83■□□□□ 0.61
USH1C-211ENST00000624811 NKX1-1Q15270 411 aaPredicted RBP18.83■□□□□ 0.6
USH1C-211ENST00000624811 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
USH1C-211ENST00000624811 PHKG2P15735 406 aa18.82■□□□□ 0.6
USH1C-211ENST00000624811 MORC1Q86VD1 984 aa18.82■□□□□ 0.6
USH1C-211ENST00000624811 IFNL2Q8IZJ0 200 aa18.82■□□□□ 0.6
USH1C-211ENST00000624811 SMARCC1Q92922 1105 aaPredicted RBP18.82■□□□□ 0.6
USH1C-211ENST00000624811 TMOD3Q9NYL9 352 aa18.82■□□□□ 0.6
USH1C-211ENST00000624811 UBR3Q6ZT12 1888 aa18.82■□□□□ 0.6
USH1C-211ENST00000624811 GPR162Q16538 588 aa18.81■□□□□ 0.6
USH1C-211ENST00000624811 SMIM5Q71RC9 77 aa18.81■□□□□ 0.6
USH1C-211ENST00000624811 NLGN2Q8NFZ4 835 aa18.81■□□□□ 0.6
USH1C-211ENST00000624811 PHF14O94880 888 aa18.8■□□□□ 0.6
USH1C-211ENST00000624811 AK7Q96M32 723 aa18.8■□□□□ 0.6
USH1C-211ENST00000624811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.6
USH1C-211ENST00000624811 IGSF1Q8N6C5 1336 aa18.79■□□□□ 0.6
USH1C-211ENST00000624811 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
USH1C-211ENST00000624811 ASAP1Q9ULH1 1129 aa18.79■□□□□ 0.6
USH1C-211ENST00000624811 KNSTRNQ9Y448 316 aa18.79■□□□□ 0.6
USH1C-211ENST00000624811 UTRNP46939 3433 aa18.79■□□□□ 0.6
USH1C-211ENST00000624811 LOC102724428A0A0B4J2F2 783 aa18.77■□□□□ 0.6
USH1C-211ENST00000624811 SIK1P57059 783 aa18.77■□□□□ 0.6
USH1C-211ENST00000624811 LINC00116Q8NCU8 138 aa18.77■□□□□ 0.6
USH1C-211ENST00000624811 KIF7Q2M1P5 1343 aa18.76■□□□□ 0.59
USH1C-211ENST00000624811 AEBP1Q8IUX7 1158 aa18.76■□□□□ 0.59
USH1C-211ENST00000624811 ATP6V1AP38606 617 aa18.75■□□□□ 0.59
USH1C-211ENST00000624811 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
USH1C-211ENST00000624811 FLAD1Q8NFF5 587 aa18.75■□□□□ 0.59
USH1C-211ENST00000624811 ATG3Q9NT62 314 aa18.75■□□□□ 0.59
USH1C-211ENST00000624811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
USH1C-211ENST00000624811 HMGB2P26583 209 aaKnown RBP18.74■□□□□ 0.59
USH1C-211ENST00000624811 ITPK1Q13572 414 aa18.74■□□□□ 0.59
USH1C-211ENST00000624811 PLEKHO1Q53GL0 409 aaPredicted RBP18.74■□□□□ 0.59
USH1C-211ENST00000624811 ZNF784Q8NCA9 323 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms