RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

Gene LINC01006, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-208ENST00000624071 BCL11BQ9C0K0 894 aaPredicted RBP25.84■■□□□ 1.73
LINC01006-208ENST00000624071 BCL9O00512 1426 aa25.83■■□□□ 1.73
LINC01006-208ENST00000624071 CAMKK2Q96RR4 588 aa25.83■■□□□ 1.73
LINC01006-208ENST00000624071 TNS1Q9HBL0 1735 aaKnown RBP25.83■■□□□ 1.72
LINC01006-208ENST00000624071 NCAPD2Q15021 1401 aa25.8■■□□□ 1.72
LINC01006-208ENST00000624071 IL13P35225 146 aa25.78■■□□□ 1.72
LINC01006-208ENST00000624071 IGSF1Q8N6C5 1336 aa25.78■■□□□ 1.72
LINC01006-208ENST00000624071 DDX10Q13206 875 aaKnown RBP25.76■■□□□ 1.71
LINC01006-208ENST00000624071 PCDH11XQ9BZA7 1347 aa25.75■■□□□ 1.71
LINC01006-208ENST00000624071 PCDH11YQ9BZA8 1340 aa25.75■■□□□ 1.71
LINC01006-208ENST00000624071 AEBP1Q8IUX7 1158 aa25.75■■□□□ 1.71
LINC01006-208ENST00000624071 SYTL4Q96C24 671 aaPredicted RBP25.75■■□□□ 1.71
LINC01006-208ENST00000624071 CYP27B1O15528 508 aa25.74■■□□□ 1.71
LINC01006-208ENST00000624071 PRIM1P49642 420 aaKnown RBP25.74■■□□□ 1.71
LINC01006-208ENST00000624071 SPG7Q9UQ90 795 aa25.74■■□□□ 1.71
LINC01006-208ENST00000624071 SULT6B1Q6IMI4 303 aa25.73■■□□□ 1.71
LINC01006-208ENST00000624071 PARD3Q8TEW0 1356 aa25.72■■□□□ 1.71
LINC01006-208ENST00000624071 PLSCR1O15162 318 aa25.72■■□□□ 1.71
LINC01006-208ENST00000624071 SBF2Q86WG5 1849 aa25.72■■□□□ 1.71
LINC01006-208ENST00000624071 PSDA5PKW4 1024 aaPredicted RBP25.71■■□□□ 1.71
LINC01006-208ENST00000624071 DIAPH1O60610 1272 aaKnown RBP25.71■■□□□ 1.71
LINC01006-208ENST00000624071 SHANK3Q9BYB0 1731 aa25.69■■□□□ 1.7
LINC01006-208ENST00000624071 PPP2R1AP30153 589 aa25.69■■□□□ 1.7
LINC01006-208ENST00000624071 PROM2Q8N271 834 aa25.68■■□□□ 1.7
LINC01006-208ENST00000624071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.68■■□□□ 1.7
LINC01006-208ENST00000624071 NHSQ6T4R5 1651 aa25.68■■□□□ 1.7
LINC01006-208ENST00000624071 HMOX1P09601 288 aa25.67■■□□□ 1.7
LINC01006-208ENST00000624071 R3HDM1Q15032 1099 aaKnown RBP25.67■■□□□ 1.7
LINC01006-208ENST00000624071 TXNRD1Q16881 649 aa25.67■■□□□ 1.7
LINC01006-208ENST00000624071 U2SURPO15042 1029 aaKnown RBP25.65■■□□□ 1.7
LINC01006-208ENST00000624071 PHKG2P15735 406 aa25.65■■□□□ 1.7
LINC01006-208ENST00000624071 PLEKHO1Q53GL0 409 aaPredicted RBP25.65■■□□□ 1.7
LINC01006-208ENST00000624071 IFNL2Q8IZJ0 200 aa25.64■■□□□ 1.7
LINC01006-208ENST00000624071 CFAP53Q96M91 514 aa25.64■■□□□ 1.7
LINC01006-208ENST00000624071 NBPF14Q5TI25 921 aa25.63■■□□□ 1.69
LINC01006-208ENST00000624071 COL3A1P02461 1466 aaPredicted RBP25.63■■□□□ 1.69
LINC01006-208ENST00000624071 KDRP35968 1356 aa25.62■■□□□ 1.69
LINC01006-208ENST00000624071 NKX1-1Q15270 411 aaPredicted RBP25.62■■□□□ 1.69
LINC01006-208ENST00000624071 ZNF530Q6P9A1 599 aaPredicted RBP25.62■■□□□ 1.69
LINC01006-208ENST00000624071 MPRIPQ6WCQ1 1025 aa25.62■■□□□ 1.69
LINC01006-208ENST00000624071 PKD1L3Q7Z443 1732 aa25.62■■□□□ 1.69
LINC01006-208ENST00000624071 AMOTQ4VCS5 1084 aa25.61■■□□□ 1.69
LINC01006-208ENST00000624071 DOT1LQ8TEK3 1739 aa25.6■■□□□ 1.69
LINC01006-208ENST00000624071 RREB1Q92766 1687 aa25.59■■□□□ 1.69
LINC01006-208ENST00000624071 ANO8Q9HCE9 1232 aaPredicted RBP25.59■■□□□ 1.69
LINC01006-208ENST00000624071 BTAF1O14981 1849 aa25.58■■□□□ 1.68
LINC01006-208ENST00000624071 PLEKHG2Q9H7P9 1386 aa25.57■■□□□ 1.68
LINC01006-208ENST00000624071 KAT6BQ8WYB5 2073 aa25.57■■□□□ 1.68
LINC01006-208ENST00000624071 NUP188Q5SRE5 1749 aa25.57■■□□□ 1.68
LINC01006-208ENST00000624071 KCNQ4P56696 695 aa25.56■■□□□ 1.68
LINC01006-208ENST00000624071 LRRC4BQ9NT99 713 aa25.56■■□□□ 1.68
LINC01006-208ENST00000624071 C1orf141Q5JVX7 400 aa25.55■■□□□ 1.68
LINC01006-208ENST00000624071 PIGBQ92521 554 aa25.55■■□□□ 1.68
LINC01006-208ENST00000624071 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
LINC01006-208ENST00000624071 RGPD3A6NKT7 1758 aaPredicted RBP25.54■■□□□ 1.68
LINC01006-208ENST00000624071 RGPD4Q7Z3J3 1758 aa25.54■■□□□ 1.68
LINC01006-208ENST00000624071 HSP90AB1P08238 724 aaKnown RBP25.53■■□□□ 1.68
LINC01006-208ENST00000624071 TMOD3Q9NYL9 352 aa25.53■■□□□ 1.68
LINC01006-208ENST00000624071 DCAF5Q96JK2 942 aa25.52■■□□□ 1.68
LINC01006-208ENST00000624071 STK32BQ9NY57 414 aa25.52■■□□□ 1.68
LINC01006-208ENST00000624071 U2AF1L5P0DN76 240 aaPredicted RBP25.51■■□□□ 1.67
LINC01006-208ENST00000624071 U2AF1Q01081 240 aaKnown RBP eCLIP25.51■■□□□ 1.67
LINC01006-208ENST00000624071 RALBP1Q15311 655 aa25.51■■□□□ 1.67
LINC01006-208ENST00000624071 MTHFSDQ2M296 383 aaKnown RBP25.51■■□□□ 1.67
LINC01006-208ENST00000624071 TOGARAM1Q9Y4F4 1720 aa25.51■■□□□ 1.67
LINC01006-208ENST00000624071 ZNF316A6NFI3 1004 aaPredicted RBP25.5■■□□□ 1.67
LINC01006-208ENST00000624071 SLC27A3Q5K4L6 730 aa25.5■■□□□ 1.67
LINC01006-208ENST00000624071 CCNL1Q9UK58 526 aaPredicted RBP25.5■■□□□ 1.67
LINC01006-208ENST00000624071 KDM6AO15550 1401 aaPredicted RBP25.49■■□□□ 1.67
LINC01006-208ENST00000624071 PALLDQ8WX93 1383 aa25.49■■□□□ 1.67
LINC01006-208ENST00000624071 PRKAR2BP31323 418 aa25.48■■□□□ 1.67
LINC01006-208ENST00000624071 SLC15A2Q16348 729 aa25.48■■□□□ 1.67
LINC01006-208ENST00000624071 AKAP4Q5JQC9 854 aa25.48■■□□□ 1.67
LINC01006-208ENST00000624071 ERVV-2B6SEH9 535 aa25.47■■□□□ 1.67
LINC01006-208ENST00000624071 CABP4P57796 275 aa25.47■■□□□ 1.67
LINC01006-208ENST00000624071 RSPH6AQ9H0K4 717 aa25.47■■□□□ 1.67
LINC01006-208ENST00000624071 ASAP1Q9ULH1 1129 aa25.47■■□□□ 1.67
LINC01006-208ENST00000624071 ZNF827Q17R98 1081 aa25.46■■□□□ 1.67
LINC01006-208ENST00000624071 SMARCC1Q92922 1105 aaPredicted RBP25.46■■□□□ 1.67
LINC01006-208ENST00000624071 PDGFDQ9GZP0 370 aaPredicted RBP25.45■■□□□ 1.66
LINC01006-208ENST00000624071 PHACTR3Q96KR7 559 aa25.44■■□□□ 1.66
LINC01006-208ENST00000624071 LGR6Q9HBX8 967 aa25.44■■□□□ 1.66
LINC01006-208ENST00000624071 ATG3Q9NT62 314 aa25.43■■□□□ 1.66
LINC01006-208ENST00000624071 MYBBP1AQ9BQG0 1328 aaKnown RBP25.42■■□□□ 1.66
LINC01006-208ENST00000624071 NFATC2IPQ8NCF5 419 aa25.42■■□□□ 1.66
LINC01006-208ENST00000624071 AKT1S1Q96B36 256 aa25.42■■□□□ 1.66
LINC01006-208ENST00000624071 RNMTO43148 476 aaKnown RBP25.41■■□□□ 1.66
LINC01006-208ENST00000624071 ITGB4P16144 1822 aa25.4■■□□□ 1.66
LINC01006-208ENST00000624071 FCHSD2O94868 740 aa25.4■■□□□ 1.66
LINC01006-208ENST00000624071 GAS2L2Q8NHY3 880 aa25.4■■□□□ 1.66
LINC01006-208ENST00000624071 PAPPAQ13219 1627 aa25.39■■□□□ 1.66
LINC01006-208ENST00000624071 LOC102724428A0A0B4J2F2 783 aa25.39■■□□□ 1.66
LINC01006-208ENST00000624071 SIK1P57059 783 aa25.39■■□□□ 1.66
LINC01006-208ENST00000624071 PRKRIP1Q9H875 184 aaPredicted RBP25.39■■□□□ 1.66
LINC01006-208ENST00000624071 TFCP2L1Q9NZI6 479 aa25.38■■□□□ 1.65
LINC01006-208ENST00000624071 LY75O60449 1722 aa25.37■■□□□ 1.65
LINC01006-208ENST00000624071 ZBTB7AO95365 584 aa25.37■■□□□ 1.65
LINC01006-208ENST00000624071 RBM42Q9BTD8 480 aaKnown RBP25.37■■□□□ 1.65
LINC01006-208ENST00000624071 MAP3K5Q99683 1374 aa25.36■■□□□ 1.65
LINC01006-208ENST00000624071 GNAT3A8MTJ3 354 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms