RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 LRP5O75197 1615 aa28.76■■■□□ 2.19
PCDHB4-202ENST00000623478 NSD2O96028 1365 aa28.75■■■□□ 2.19
PCDHB4-202ENST00000623478 WASHC2AQ641Q2 1341 aa28.75■■■□□ 2.19
PCDHB4-202ENST00000623478 PROM2Q8N271 834 aa28.75■■■□□ 2.19
PCDHB4-202ENST00000623478 ZCRB1Q8TBF4 217 aaKnown RBP28.75■■■□□ 2.19
PCDHB4-202ENST00000623478 NBPF14Q5TI25 921 aa28.74■■■□□ 2.19
PCDHB4-202ENST00000623478 RAPGEF4Q8WZA2 1011 aa28.74■■■□□ 2.19
PCDHB4-202ENST00000623478 BTAF1O14981 1849 aa28.73■■■□□ 2.19
PCDHB4-202ENST00000623478 DOT1LQ8TEK3 1739 aa28.71■■■□□ 2.19
PCDHB4-202ENST00000623478 NCAPD2Q15021 1401 aa28.7■■■□□ 2.19
PCDHB4-202ENST00000623478 TATP17735 454 aaPredicted RBP28.7■■■□□ 2.18
PCDHB4-202ENST00000623478 TXNRD1Q16881 649 aa28.7■■■□□ 2.18
PCDHB4-202ENST00000623478 ANO8Q9HCE9 1232 aaPredicted RBP28.7■■■□□ 2.18
PCDHB4-202ENST00000623478 KNSTRNQ9Y448 316 aa28.7■■■□□ 2.18
PCDHB4-202ENST00000623478 KAT6BQ8WYB5 2073 aa28.67■■■□□ 2.18
PCDHB4-202ENST00000623478 MORC1Q86VD1 984 aa28.67■■■□□ 2.18
PCDHB4-202ENST00000623478 EYA1Q99502 592 aa28.66■■■□□ 2.18
PCDHB4-202ENST00000623478 EIF4A2Q14240 407 aaKnown RBP28.65■■■□□ 2.18
PCDHB4-202ENST00000623478 AMER1Q5JTC6 1135 aaPredicted RBP28.65■■■□□ 2.18
PCDHB4-202ENST00000623478 SYTL4Q96C24 671 aaPredicted RBP28.65■■■□□ 2.18
PCDHB4-202ENST00000623478 PRIM1P49642 420 aaKnown RBP28.64■■■□□ 2.18
PCDHB4-202ENST00000623478 PKD1L3Q7Z443 1732 aa28.63■■■□□ 2.17
PCDHB4-202ENST00000623478 PCDH11XQ9BZA7 1347 aa28.63■■■□□ 2.17
PCDHB4-202ENST00000623478 PCDH11YQ9BZA8 1340 aa28.63■■■□□ 2.17
PCDHB4-202ENST00000623478 PAPPAQ13219 1627 aa28.59■■■□□ 2.17
PCDHB4-202ENST00000623478 CYP27B1O15528 508 aa28.59■■■□□ 2.17
PCDHB4-202ENST00000623478 PER1O15534 1290 aaPredicted RBP28.58■■■□□ 2.17
PCDHB4-202ENST00000623478 PDGFDQ9GZP0 370 aaPredicted RBP28.57■■■□□ 2.16
PCDHB4-202ENST00000623478 CASZ1Q86V15 1759 aa28.57■■■□□ 2.16
PCDHB4-202ENST00000623478 LRRC4BQ9NT99 713 aa28.56■■■□□ 2.16
PCDHB4-202ENST00000623478 STK32BQ9NY57 414 aa28.56■■■□□ 2.16
PCDHB4-202ENST00000623478 TOGARAM1Q9Y4F4 1720 aa28.55■■■□□ 2.16
PCDHB4-202ENST00000623478 IGSF1Q8N6C5 1336 aa28.55■■■□□ 2.16
PCDHB4-202ENST00000623478 SLC15A2Q16348 729 aa28.54■■■□□ 2.16
PCDHB4-202ENST00000623478 CC2D1BQ5T0F9 858 aaKnown RBP28.54■■■□□ 2.16
PCDHB4-202ENST00000623478 SPG7Q9UQ90 795 aa28.53■■■□□ 2.16
PCDHB4-202ENST00000623478 LY75O60449 1722 aa28.52■■■□□ 2.16
PCDHB4-202ENST00000623478 KCNQ4P56696 695 aa28.51■■■□□ 2.15
PCDHB4-202ENST00000623478 ZNF827Q17R98 1081 aa28.49■■■□□ 2.15
PCDHB4-202ENST00000623478 SLC27A3Q5K4L6 730 aa28.49■■■□□ 2.15
PCDHB4-202ENST00000623478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.49■■■□□ 2.15
PCDHB4-202ENST00000623478 CNGB1Q14028 1251 aaPredicted RBP28.48■■■□□ 2.15
PCDHB4-202ENST00000623478 SPON1Q9HCB6 807 aa28.48■■■□□ 2.15
PCDHB4-202ENST00000623478 MPRIPQ6WCQ1 1025 aa28.47■■■□□ 2.15
PCDHB4-202ENST00000623478 AEBP1Q8IUX7 1158 aa28.47■■■□□ 2.15
PCDHB4-202ENST00000623478 ITGB4P16144 1822 aa28.46■■■□□ 2.15
PCDHB4-202ENST00000623478 ZBTB7AO95365 584 aa28.46■■■□□ 2.15
PCDHB4-202ENST00000623478 MTHFSP49914 203 aa28.46■■■□□ 2.15
PCDHB4-202ENST00000623478 NKX1-1Q15270 411 aaPredicted RBP28.46■■■□□ 2.15
PCDHB4-202ENST00000623478 PHKG2P15735 406 aa28.45■■■□□ 2.14
PCDHB4-202ENST00000623478 IL13P35225 146 aa28.45■■■□□ 2.14
PCDHB4-202ENST00000623478 PLEKHG2Q9H7P9 1386 aa28.44■■■□□ 2.14
PCDHB4-202ENST00000623478 NPC1L1Q9UHC9 1359 aa28.44■■■□□ 2.14
PCDHB4-202ENST00000623478 IFNL2Q8IZJ0 200 aa28.43■■■□□ 2.14
PCDHB4-202ENST00000623478 AKT1S1Q96B36 256 aa28.43■■■□□ 2.14
PCDHB4-202ENST00000623478 CCNL1Q9UK58 526 aaPredicted RBP28.43■■■□□ 2.14
PCDHB4-202ENST00000623478 PALLDQ8WX93 1383 aa28.41■■■□□ 2.14
PCDHB4-202ENST00000623478 SULT6B1Q6IMI4 303 aa28.41■■■□□ 2.14
PCDHB4-202ENST00000623478 PIGBQ92521 554 aa28.4■■■□□ 2.14
PCDHB4-202ENST00000623478 KDRP35968 1356 aa28.39■■■□□ 2.14
PCDHB4-202ENST00000623478 ATF5Q9Y2D1 282 aaPredicted RBP28.39■■■□□ 2.14
PCDHB4-202ENST00000623478 PPP1R1BQ9UD71 204 aaPredicted RBP28.38■■■□□ 2.13
PCDHB4-202ENST00000623478 TUBGCP6Q96RT7 1819 aa28.38■■■□□ 2.13
PCDHB4-202ENST00000623478 PLEKHO1Q53GL0 409 aaPredicted RBP28.37■■■□□ 2.13
PCDHB4-202ENST00000623478 PTGER2P43116 358 aa28.36■■■□□ 2.13
PCDHB4-202ENST00000623478 ZNF530Q6P9A1 599 aaPredicted RBP28.36■■■□□ 2.13
PCDHB4-202ENST00000623478 C5P01031 1676 aa28.35■■■□□ 2.13
PCDHB4-202ENST00000623478 QSER1Q2KHR3 1735 aa28.35■■■□□ 2.13
PCDHB4-202ENST00000623478 TMOD3Q9NYL9 352 aa28.35■■■□□ 2.13
PCDHB4-202ENST00000623478 TFCP2L1Q9NZI6 479 aa28.35■■■□□ 2.13
PCDHB4-202ENST00000623478 PNPLA7Q6ZV29 1317 aa28.35■■■□□ 2.13
PCDHB4-202ENST00000623478 AMOTQ4VCS5 1084 aa28.34■■■□□ 2.13
PCDHB4-202ENST00000623478 MTFR1LQ9H019 292 aa28.34■■■□□ 2.13
PCDHB4-202ENST00000623478 COL3A1P02461 1466 aaPredicted RBP28.34■■■□□ 2.13
PCDHB4-202ENST00000623478 KDM6AO15550 1401 aaPredicted RBP28.33■■■□□ 2.13
PCDHB4-202ENST00000623478 DIAPH1O60610 1272 aaKnown RBP28.32■■■□□ 2.12
PCDHB4-202ENST00000623478 SMARCC1Q92922 1105 aaPredicted RBP28.32■■■□□ 2.12
PCDHB4-202ENST00000623478 HMOX1P09601 288 aa28.31■■■□□ 2.12
PCDHB4-202ENST00000623478 TAF1LQ8IZX4 1826 aa28.3■■■□□ 2.12
PCDHB4-202ENST00000623478 DCAF5Q96JK2 942 aa28.3■■■□□ 2.12
PCDHB4-202ENST00000623478 ASAP1Q9ULH1 1129 aa28.3■■■□□ 2.12
PCDHB4-202ENST00000623478 SGIP1Q9BQI5 828 aa28.29■■■□□ 2.12
PCDHB4-202ENST00000623478 HSP90AB1P08238 724 aaKnown RBP28.28■■■□□ 2.12
PCDHB4-202ENST00000623478 C1orf141Q5JVX7 400 aa28.27■■■□□ 2.12
PCDHB4-202ENST00000623478 C4BP0C0L5 1744 aa28.26■■■□□ 2.12
PCDHB4-202ENST00000623478 ERVV-2B6SEH9 535 aa28.26■■■□□ 2.11
PCDHB4-202ENST00000623478 ATG3Q9NT62 314 aa28.26■■■□□ 2.11
PCDHB4-202ENST00000623478 LOC102724428A0A0B4J2F2 783 aa28.25■■■□□ 2.11
PCDHB4-202ENST00000623478 SIK1P57059 783 aa28.25■■■□□ 2.11
PCDHB4-202ENST00000623478 COL23A1Q86Y22 540 aaPredicted RBP28.22■■■□□ 2.11
PCDHB4-202ENST00000623478 SLC16A10Q8TF71 515 aa28.22■■■□□ 2.11
PCDHB4-202ENST00000623478 U2SURPO15042 1029 aaKnown RBP28.21■■■□□ 2.11
PCDHB4-202ENST00000623478 CABP4P57796 275 aa28.21■■■□□ 2.11
PCDHB4-202ENST00000623478 LINC00116Q8NCU8 138 aa28.21■■■□□ 2.11
PCDHB4-202ENST00000623478 MSH5O43196 834 aa28.2■■■□□ 2.1
PCDHB4-202ENST00000623478 ITPK1Q13572 414 aa28.2■■■□□ 2.1
PCDHB4-202ENST00000623478 AMIGO3Q86WK7 504 aa28.2■■■□□ 2.1
PCDHB4-202ENST00000623478 COL24A1Q17RW2 1714 aa28.19■■■□□ 2.1
PCDHB4-202ENST00000623478 PPP2R1AP30153 589 aa28.19■■■□□ 2.1
PCDHB4-202ENST00000623478 AK7Q96M32 723 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms