RNA–Protein interactions for RNA: ENST00000623324.1

CU638689.4-208, humanhuman

TSL 1 (best) BASIC

Gene CU638689.4, Length 936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU638689.4-208ENST00000623324 PTGDRQ13258 359 aa13.7□□□□□ -0.22
CU638689.4-208ENST00000623324 MST1RQ04912 1400 aa13.7□□□□□ -0.22
CU638689.4-208ENST00000623324 NRXN3Q9Y4C0 1643 aa13.69□□□□□ -0.22
CU638689.4-208ENST00000623324 LCE2BO14633 110 aa13.69□□□□□ -0.22
CU638689.4-208ENST00000623324 ITGAEP38570 1179 aa13.69□□□□□ -0.22
CU638689.4-208ENST00000623324 ZNF326Q5BKZ1 582 aaKnown RBP13.69□□□□□ -0.22
CU638689.4-208ENST00000623324 ROCK1Q13464 1354 aa13.69□□□□□ -0.22
CU638689.4-208ENST00000623324 CDK12Q9NYV4 1490 aaPredicted RBP13.68□□□□□ -0.22
CU638689.4-208ENST00000623324 SETBP1Q9Y6X0 1596 aa13.68□□□□□ -0.22
CU638689.4-208ENST00000623324 DDX17Q92841 729 aaKnown RBP13.68□□□□□ -0.22
CU638689.4-208ENST00000623324 C8orf37Q96NL8 207 aa13.68□□□□□ -0.22
CU638689.4-208ENST00000623324 NHSL1Q5SYE7 1610 aa13.68□□□□□ -0.22
CU638689.4-208ENST00000623324 RGS12O14924 1447 aa13.67□□□□□ -0.22
CU638689.4-208ENST00000623324 SETD5Q9C0A6 1442 aa13.67□□□□□ -0.22
CU638689.4-208ENST00000623324 COPS2P61201 443 aa13.66□□□□□ -0.22
CU638689.4-208ENST00000623324 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
CU638689.4-208ENST00000623324 METP08581 1390 aa13.66□□□□□ -0.22
CU638689.4-208ENST00000623324 ADGRL3Q9HAR2 1447 aa13.65□□□□□ -0.22
CU638689.4-208ENST00000623324 PNPLA6Q8IY17 1366 aa13.65□□□□□ -0.22
CU638689.4-208ENST00000623324 SPHKAPQ2M3C7 1700 aa13.64□□□□□ -0.23
CU638689.4-208ENST00000623324 Q6ZNB5 142 aa13.64□□□□□ -0.23
CU638689.4-208ENST00000623324 LRRC59Q96AG4 307 aaKnown RBP13.64□□□□□ -0.23
CU638689.4-208ENST00000623324 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
CU638689.4-208ENST00000623324 NALCNQ8IZF0 1738 aa13.64□□□□□ -0.23
CU638689.4-208ENST00000623324 SLF2Q8IX21 1173 aa13.63□□□□□ -0.23
CU638689.4-208ENST00000623324 SEMA3EO15041 775 aa13.62□□□□□ -0.23
CU638689.4-208ENST00000623324 ADAMTS2O95450 1211 aa13.62□□□□□ -0.23
CU638689.4-208ENST00000623324 RBM6P78332 1123 aaKnown RBP13.62□□□□□ -0.23
CU638689.4-208ENST00000623324 QTRT2Q9H974 415 aaKnown RBP13.62□□□□□ -0.23
CU638689.4-208ENST00000623324 ADGRG1Q9Y653 693 aa13.62□□□□□ -0.23
CU638689.4-208ENST00000623324 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
CU638689.4-208ENST00000623324 NEXMIFQ5QGS0 1516 aa13.61□□□□□ -0.23
CU638689.4-208ENST00000623324 NGLY1Q96IV0 654 aa13.6□□□□□ -0.23
CU638689.4-208ENST00000623324 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.6□□□□□ -0.23
CU638689.4-208ENST00000623324 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
CU638689.4-208ENST00000623324 PPARGC1BQ86YN6 1023 aaKnown RBP13.59□□□□□ -0.23
CU638689.4-208ENST00000623324 NUTM2FA1L443 756 aa13.58□□□□□ -0.24
CU638689.4-208ENST00000623324 GFRA3O60609 400 aa13.57□□□□□ -0.24
CU638689.4-208ENST00000623324 ORAI2Q96SN7 254 aa13.56□□□□□ -0.24
CU638689.4-208ENST00000623324 TMEM134Q9H6X4 195 aa13.56□□□□□ -0.24
CU638689.4-208ENST00000623324 USP21Q9UK80 565 aa13.56□□□□□ -0.24
CU638689.4-208ENST00000623324 ATAD2Q6PL18 1390 aa13.56□□□□□ -0.24
CU638689.4-208ENST00000623324 ROBO2Q9HCK4 1378 aa13.56□□□□□ -0.24
CU638689.4-208ENST00000623324 PTCH1Q13635 1447 aa13.56□□□□□ -0.24
CU638689.4-208ENST00000623324 ZPR1O75312 459 aa13.55□□□□□ -0.24
CU638689.4-208ENST00000623324 DNAJB2P25686 324 aa13.55□□□□□ -0.24
CU638689.4-208ENST00000623324 BLOC1S3Q6QNY0 202 aa13.55□□□□□ -0.24
CU638689.4-208ENST00000623324 RCCD1A6NED2 376 aa13.54□□□□□ -0.24
CU638689.4-208ENST00000623324 LAMC1P11047 1609 aa13.53□□□□□ -0.24
CU638689.4-208ENST00000623324 TRPC5Q9UL62 973 aaPredicted RBP13.53□□□□□ -0.24
CU638689.4-208ENST00000623324 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
CU638689.4-208ENST00000623324 KIF1BO60333 1816 aa13.53□□□□□ -0.24
CU638689.4-208ENST00000623324 TLL1O43897 1013 aa13.52□□□□□ -0.25
CU638689.4-208ENST00000623324 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.25
CU638689.4-208ENST00000623324 NECTIN2Q92692 538 aa13.52□□□□□ -0.25
CU638689.4-208ENST00000623324 EMID1Q96A84 441 aaPredicted RBP13.52□□□□□ -0.25
CU638689.4-208ENST00000623324 PCDHB3Q9Y5E6 796 aa13.52□□□□□ -0.25
CU638689.4-208ENST00000623324 V9GY48 417 aaPredicted RBP13.52□□□□□ -0.25
CU638689.4-208ENST00000623324 ATRNO75882 1429 aa13.5□□□□□ -0.25
CU638689.4-208ENST00000623324 SLC10A3P09131 477 aa13.5□□□□□ -0.25
CU638689.4-208ENST00000623324 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
CU638689.4-208ENST00000623324 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
CU638689.4-208ENST00000623324 XPCQ01831 940 aaPredicted RBP13.49□□□□□ -0.25
CU638689.4-208ENST00000623324 MYOM2P54296 1465 aa13.48□□□□□ -0.25
CU638689.4-208ENST00000623324 FCHSD2O94868 740 aa13.48□□□□□ -0.25
CU638689.4-208ENST00000623324 LAPTM4AQ15012 233 aa13.48□□□□□ -0.25
CU638689.4-208ENST00000623324 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
CU638689.4-208ENST00000623324 FNBP4Q8N3X1 1017 aaPredicted RBP13.48□□□□□ -0.25
CU638689.4-208ENST00000623324 CDC42BPGQ6DT37 1551 aa13.48□□□□□ -0.25
CU638689.4-208ENST00000623324 NAIPQ13075 1403 aa13.47□□□□□ -0.25
CU638689.4-208ENST00000623324 PRAG1Q86YV5 1406 aa13.47□□□□□ -0.25
CU638689.4-208ENST00000623324 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
CU638689.4-208ENST00000623324 RBM26Q5T8P6 1007 aaKnown RBP13.47□□□□□ -0.25
CU638689.4-208ENST00000623324 FECHP22830 423 aa13.46□□□□□ -0.25
CU638689.4-208ENST00000623324 PXDNQ92626 1479 aa13.46□□□□□ -0.25
CU638689.4-208ENST00000623324 BCL9LQ86UU0 1499 aa13.45□□□□□ -0.26
CU638689.4-208ENST00000623324 RNF223E7ERA6 249 aa13.45□□□□□ -0.26
CU638689.4-208ENST00000623324 NRG2O14511 850 aaPredicted RBP13.45□□□□□ -0.26
CU638689.4-208ENST00000623324 CFHP08603 1231 aa13.45□□□□□ -0.26
CU638689.4-208ENST00000623324 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
CU638689.4-208ENST00000623324 TRAF7Q6Q0C0 670 aa13.45□□□□□ -0.26
CU638689.4-208ENST00000623324 PXYLP1Q8TE99 480 aa13.45□□□□□ -0.26
CU638689.4-208ENST00000623324 PPLO60437 1756 aa13.45□□□□□ -0.26
CU638689.4-208ENST00000623324 RPGRIP1LQ68CZ1 1315 aa13.44□□□□□ -0.26
CU638689.4-208ENST00000623324 TESPA1A2RU30 521 aaPredicted RBP13.44□□□□□ -0.26
CU638689.4-208ENST00000623324 FOXO3O43524 673 aa13.44□□□□□ -0.26
CU638689.4-208ENST00000623324 ACTN4O43707 911 aaKnown RBP13.44□□□□□ -0.26
CU638689.4-208ENST00000623324 STK26Q9P289 416 aa13.44□□□□□ -0.26
CU638689.4-208ENST00000623324 PRR14Q9BWN1 585 aa13.43□□□□□ -0.26
CU638689.4-208ENST00000623324 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
CU638689.4-208ENST00000623324 RRBP1Q9P2E9 1410 aaKnown RBP13.42□□□□□ -0.26
CU638689.4-208ENST00000623324 GPR37O15354 613 aa13.42□□□□□ -0.26
CU638689.4-208ENST00000623324 TMUB1Q9BVT8 246 aa13.42□□□□□ -0.26
CU638689.4-208ENST00000623324 PPEF1O14829 653 aaPredicted RBP13.41□□□□□ -0.26
CU638689.4-208ENST00000623324 TRIM67Q6ZTA4 783 aa13.41□□□□□ -0.26
CU638689.4-208ENST00000623324 GJD4Q96KN9 370 aaPredicted RBP13.41□□□□□ -0.26
CU638689.4-208ENST00000623324 LRPPRCP42704 1394 aaKnown RBP13.41□□□□□ -0.26
CU638689.4-208ENST00000623324 ADGRF5Q8IZF2 1346 aa13.4□□□□□ -0.26
CU638689.4-208ENST00000623324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.4□□□□□ -0.26
CU638689.4-208ENST00000623324 GGCXP38435 758 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms