RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CNNM1Q9NRU3 951 aa19.23■□□□□ 0.67
GABRB3-215ENST00000622697 TBC1D2BQ9UPU7 963 aa19.23■□□□□ 0.67
GABRB3-215ENST00000622697 CCDC192P0DO97 292 aa19.23■□□□□ 0.67
GABRB3-215ENST00000622697 KRT85P78386 507 aa19.23■□□□□ 0.67
GABRB3-215ENST00000622697 NUP153P49790 1475 aaKnown RBP19.23■□□□□ 0.67
GABRB3-215ENST00000622697 IPO7O95373 1038 aaKnown RBP19.23■□□□□ 0.67
GABRB3-215ENST00000622697 TTLL5Q6EMB2 1281 aa19.23■□□□□ 0.67
GABRB3-215ENST00000622697 ME1P48163 572 aa19.22■□□□□ 0.67
GABRB3-215ENST00000622697 CCDC158Q5M9N0 1113 aa19.22■□□□□ 0.67
GABRB3-215ENST00000622697 PARD3Q8TEW0 1356 aa19.22■□□□□ 0.67
GABRB3-215ENST00000622697 AEBP1Q8IUX7 1158 aa19.22■□□□□ 0.67
GABRB3-215ENST00000622697 LRRFIP2Q9Y608 721 aaKnown RBP19.22■□□□□ 0.67
GABRB3-215ENST00000622697 WASLO00401 505 aaPredicted RBP19.22■□□□□ 0.67
GABRB3-215ENST00000622697 CCDC83Q8IWF9 413 aa19.22■□□□□ 0.67
GABRB3-215ENST00000622697 KIF6Q6ZMV9 814 aa19.22■□□□□ 0.67
GABRB3-215ENST00000622697 DDX11Q96FC9 970 aa19.22■□□□□ 0.67
GABRB3-215ENST00000622697 TBC1D32Q96NH3 1257 aa19.22■□□□□ 0.67
GABRB3-215ENST00000622697 PRAG1Q86YV5 1406 aa19.21■□□□□ 0.67
GABRB3-215ENST00000622697 PRPF40BQ6NWY9 871 aaKnown RBP19.21■□□□□ 0.67
GABRB3-215ENST00000622697 TOM1L2Q6ZVM7 507 aa19.21■□□□□ 0.67
GABRB3-215ENST00000622697 TESK2Q96S53 571 aa19.21■□□□□ 0.67
GABRB3-215ENST00000622697 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
GABRB3-215ENST00000622697 TAF7Q15545 349 aaPredicted RBP19.2■□□□□ 0.66
GABRB3-215ENST00000622697 ATP10BO94823 1461 aa19.2■□□□□ 0.66
GABRB3-215ENST00000622697 ANKRD1Q15327 319 aa19.2■□□□□ 0.66
GABRB3-215ENST00000622697 CAMK4Q16566 473 aa19.2■□□□□ 0.66
GABRB3-215ENST00000622697 C8orf34Q49A92 452 aa19.2■□□□□ 0.66
GABRB3-215ENST00000622697 SPATA32Q96LK8 384 aa19.2■□□□□ 0.66
GABRB3-215ENST00000622697 ZNF396Q96N95 335 aaPredicted RBP19.2■□□□□ 0.66
GABRB3-215ENST00000622697 RAPGEF6Q8TEU7 1601 aa19.19■□□□□ 0.66
GABRB3-215ENST00000622697 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
GABRB3-215ENST00000622697 CCDC47Q96A33 483 aaKnown RBP19.19■□□□□ 0.66
GABRB3-215ENST00000622697 BOLA2Q9H3K6 86 aa19.19■□□□□ 0.66
GABRB3-215ENST00000622697 KIF1BPQ96EK5 621 aa19.19■□□□□ 0.66
GABRB3-215ENST00000622697 SAMD1Q6SPF0 538 aaPredicted RBP19.18■□□□□ 0.66
GABRB3-215ENST00000622697 GDPD2Q9HCC8 539 aa19.18■□□□□ 0.66
GABRB3-215ENST00000622697 MPRIPQ6WCQ1 1025 aa19.18■□□□□ 0.66
GABRB3-215ENST00000622697 RLBP1P12271 317 aa19.18■□□□□ 0.66
GABRB3-215ENST00000622697 GPS2Q13227 327 aa19.18■□□□□ 0.66
GABRB3-215ENST00000622697 FANCAO15360 1455 aa19.18■□□□□ 0.66
GABRB3-215ENST00000622697 SPG7Q9UQ90 795 aa19.18■□□□□ 0.66
GABRB3-215ENST00000622697 BRPF1P55201 1214 aaPredicted RBP19.17■□□□□ 0.66
GABRB3-215ENST00000622697 CEP89Q96ST8 783 aa19.17■□□□□ 0.66
GABRB3-215ENST00000622697 SART3Q15020 963 aaKnown RBP19.17■□□□□ 0.66
GABRB3-215ENST00000622697 CCDC8Q9H0W5 538 aaPredicted RBP19.17■□□□□ 0.66
GABRB3-215ENST00000622697 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
GABRB3-215ENST00000622697 CCDC57Q2TAC2 916 aa19.16■□□□□ 0.66
GABRB3-215ENST00000622697 TRIM34Q9BYJ4 488 aa19.16■□□□□ 0.66
GABRB3-215ENST00000622697 CEBPAP49715 358 aaPredicted RBP19.16■□□□□ 0.66
GABRB3-215ENST00000622697 BMP2KLQ5H9B9 411 aa19.16■□□□□ 0.66
GABRB3-215ENST00000622697 ASXL1Q8IXJ9 1541 aa19.15■□□□□ 0.66
GABRB3-215ENST00000622697 UQCRHLA0A096LP55 91 aa19.15■□□□□ 0.66
GABRB3-215ENST00000622697 UQCRHP07919 91 aa19.15■□□□□ 0.66
GABRB3-215ENST00000622697 FLIIQ13045 1269 aa19.15■□□□□ 0.66
GABRB3-215ENST00000622697 CCDC70Q6NSX1 233 aa19.15■□□□□ 0.66
GABRB3-215ENST00000622697 XBP1P17861 261 aa19.15■□□□□ 0.66
GABRB3-215ENST00000622697 NUP62CLQ9H1M0 184 aa19.15■□□□□ 0.66
GABRB3-215ENST00000622697 BRMS1Q9HCU9 246 aa19.15■□□□□ 0.66
GABRB3-215ENST00000622697 CARD14Q9BXL6 1004 aa19.14■□□□□ 0.66
GABRB3-215ENST00000622697 ZSCAN31Q96LW9 406 aaPredicted RBP19.14■□□□□ 0.65
GABRB3-215ENST00000622697 NAP1L1P55209 391 aaKnown RBP19.14■□□□□ 0.65
GABRB3-215ENST00000622697 ANKLE2Q86XL3 938 aa19.14■□□□□ 0.65
GABRB3-215ENST00000622697 GLRX3O76003 335 aaKnown RBP19.13■□□□□ 0.65
GABRB3-215ENST00000622697 SYCP2Q9BX26 1530 aa19.13■□□□□ 0.65
GABRB3-215ENST00000622697 SEC24BO95487 1268 aa19.13■□□□□ 0.65
GABRB3-215ENST00000622697 AMOTL2Q9Y2J4 779 aa19.13■□□□□ 0.65
GABRB3-215ENST00000622697 NUCB1Q02818 461 aa19.13■□□□□ 0.65
GABRB3-215ENST00000622697 PER1O15534 1290 aaPredicted RBP19.12■□□□□ 0.65
GABRB3-215ENST00000622697 PTCD1O75127 700 aaKnown RBP19.12■□□□□ 0.65
GABRB3-215ENST00000622697 MYD88Q99836 296 aa19.12■□□□□ 0.65
GABRB3-215ENST00000622697 SERPINC1P01008 464 aa19.12■□□□□ 0.65
GABRB3-215ENST00000622697 ARGLU1Q9NWB6 273 aaPredicted RBP19.12■□□□□ 0.65
GABRB3-215ENST00000622697 ZRANB1Q9UGI0 708 aa19.12■□□□□ 0.65
GABRB3-215ENST00000622697 ANXA1P04083 346 aa19.12■□□□□ 0.65
GABRB3-215ENST00000622697 TCOF1Q13428 1488 aaKnown RBP19.12■□□□□ 0.65
GABRB3-215ENST00000622697 FILIP1Q7Z7B0 1213 aa19.12■□□□□ 0.65
GABRB3-215ENST00000622697 ZSCAN30Q86W11 494 aa19.12■□□□□ 0.65
GABRB3-215ENST00000622697 NUP133Q8WUM0 1156 aa19.12■□□□□ 0.65
GABRB3-215ENST00000622697 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.12■□□□□ 0.65
GABRB3-215ENST00000622697 RBM27Q9P2N5 1060 aaKnown RBP19.12■□□□□ 0.65
GABRB3-215ENST00000622697 CEP126Q9P2H0 1117 aa19.12■□□□□ 0.65
GABRB3-215ENST00000622697 RAB11FIP3O75154 756 aa19.11■□□□□ 0.65
GABRB3-215ENST00000622697 TEX35Q5T0J7 233 aa19.11■□□□□ 0.65
GABRB3-215ENST00000622697 MEIS3Q99687 375 aa19.11■□□□□ 0.65
GABRB3-215ENST00000622697 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
GABRB3-215ENST00000622697 C16orf71Q8IYS4 520 aaPredicted RBP19.11■□□□□ 0.65
GABRB3-215ENST00000622697 KDM5BQ9UGL1 1544 aa19.11■□□□□ 0.65
GABRB3-215ENST00000622697 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
GABRB3-215ENST00000622697 NSD2O96028 1365 aa19.11■□□□□ 0.65
GABRB3-215ENST00000622697 HDAC1Q13547 482 aaPredicted RBP19.1■□□□□ 0.65
GABRB3-215ENST00000622697 TTC22Q5TAA0 569 aa19.1■□□□□ 0.65
GABRB3-215ENST00000622697 FAM177A1Q8N128 213 aaPredicted RBP19.1■□□□□ 0.65
GABRB3-215ENST00000622697 C8orf58Q8NAV2 365 aa19.1■□□□□ 0.65
GABRB3-215ENST00000622697 DNAAF4Q8WXU2 420 aa19.1■□□□□ 0.65
GABRB3-215ENST00000622697 PRDM11Q9NQV5 511 aa19.1■□□□□ 0.65
GABRB3-215ENST00000622697 CFAP43Q8NDM7 1665 aa19.1■□□□□ 0.65
GABRB3-215ENST00000622697 HSP90AB2PQ58FF8 381 aa19.1■□□□□ 0.65
GABRB3-215ENST00000622697 CTTNBP2Q8WZ74 1663 aa19.09■□□□□ 0.65
GABRB3-215ENST00000622697 FOXO3O43524 673 aa19.09■□□□□ 0.65
GABRB3-215ENST00000622697 BAG4O95429 457 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms