RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 TRIM52Q96A61 297 aa7.5□□□□□ -1.21
RPRD1B-209ENST00000622494 TSR3Q9UJK0 312 aaKnown RBP7.5□□□□□ -1.21
RPRD1B-209ENST00000622494 NEXMIFQ5QGS0 1516 aa7.5□□□□□ -1.21
RPRD1B-209ENST00000622494 HFM1A2PYH4 1435 aa7.5□□□□□ -1.21
RPRD1B-209ENST00000622494 MED1Q15648 1581 aaPredicted RBP7.5□□□□□ -1.21
RPRD1B-209ENST00000622494 SETD1AO15047 1707 aaKnown RBP7.49□□□□□ -1.21
RPRD1B-209ENST00000622494 TRPM2O94759 1503 aa7.49□□□□□ -1.21
RPRD1B-209ENST00000622494 ROBO1Q9Y6N7 1651 aa7.49□□□□□ -1.21
RPRD1B-209ENST00000622494 MS4A1P11836 297 aa7.49□□□□□ -1.21
RPRD1B-209ENST00000622494 SSTR3P32745 418 aaPredicted RBP7.49□□□□□ -1.21
RPRD1B-209ENST00000622494 NECTIN2Q92692 538 aa7.49□□□□□ -1.21
RPRD1B-209ENST00000622494 HPS5Q9UPZ3 1129 aa7.49□□□□□ -1.21
RPRD1B-209ENST00000622494 EID1Q9Y6B2 187 aa7.49□□□□□ -1.21
RPRD1B-209ENST00000622494 KIF1BO60333 1816 aa7.49□□□□□ -1.21
RPRD1B-209ENST00000622494 PLEKHG1Q9ULL1 1385 aa7.48□□□□□ -1.21
RPRD1B-209ENST00000622494 PPP1R15AO75807 674 aaPredicted RBP7.48□□□□□ -1.21
RPRD1B-209ENST00000622494 KCNA6P17658 529 aa7.48□□□□□ -1.21
RPRD1B-209ENST00000622494 SLC4A3P48751 1232 aa7.48□□□□□ -1.21
RPRD1B-209ENST00000622494 KDM4CQ9H3R0 1056 aa7.48□□□□□ -1.21
RPRD1B-209ENST00000622494 GPBP1L1Q9HC44 474 aaPredicted RBP7.48□□□□□ -1.21
RPRD1B-209ENST00000622494 SLC52A1Q9NWF4 448 aa7.48□□□□□ -1.21
RPRD1B-209ENST00000622494 XRN1Q8IZH2 1706 aaKnown RBP7.47□□□□□ -1.21
RPRD1B-209ENST00000622494 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.47□□□□□ -1.21
RPRD1B-209ENST00000622494 PPLO60437 1756 aa7.47□□□□□ -1.21
RPRD1B-209ENST00000622494 DDX11L8A8MPP1 907 aa7.47□□□□□ -1.21
RPRD1B-209ENST00000622494 PROSER2Q86WR7 435 aaPredicted RBP7.47□□□□□ -1.21
RPRD1B-209ENST00000622494 WBP1LQ9NX94 342 aa7.47□□□□□ -1.21
RPRD1B-209ENST00000622494 NALCNQ8IZF0 1738 aa7.47□□□□□ -1.21
RPRD1B-209ENST00000622494 METP08581 1390 aa7.46□□□□□ -1.21
RPRD1B-209ENST00000622494 GCGRP47871 477 aa7.46□□□□□ -1.22
RPRD1B-209ENST00000622494 PPP4CP60510 307 aa7.46□□□□□ -1.22
RPRD1B-209ENST00000622494 ZNF326Q5BKZ1 582 aaKnown RBP7.46□□□□□ -1.22
RPRD1B-209ENST00000622494 NYAP1Q6ZVC0 841 aa7.46□□□□□ -1.22
RPRD1B-209ENST00000622494 IFT172Q9UG01 1749 aa7.45□□□□□ -1.22
RPRD1B-209ENST00000622494 NEUROD2Q15784 382 aa7.45□□□□□ -1.22
RPRD1B-209ENST00000622494 HCSTQ9UBK5 93 aa7.45□□□□□ -1.22
RPRD1B-209ENST00000622494 ASXL1Q8IXJ9 1541 aa7.45□□□□□ -1.22
RPRD1B-209ENST00000622494 SETBP1Q9Y6X0 1596 aa7.45□□□□□ -1.22
RPRD1B-209ENST00000622494 PHLPP1O60346 1717 aa7.44□□□□□ -1.22
RPRD1B-209ENST00000622494 TOM1O60784 492 aa7.44□□□□□ -1.22
RPRD1B-209ENST00000622494 RNF40O75150 1001 aa7.44□□□□□ -1.22
RPRD1B-209ENST00000622494 CFHP08603 1231 aa7.44□□□□□ -1.22
RPRD1B-209ENST00000622494 APLP1P51693 650 aa7.44□□□□□ -1.22
RPRD1B-209ENST00000622494 RDH13Q8NBN7 331 aa7.44□□□□□ -1.22
RPRD1B-209ENST00000622494 DDX17Q92841 729 aaKnown RBP7.44□□□□□ -1.22
RPRD1B-209ENST00000622494 NKTRP30414 1462 aaKnown RBP7.43□□□□□ -1.22
RPRD1B-209ENST00000622494 ACTN4O43707 911 aaKnown RBP7.43□□□□□ -1.22
RPRD1B-209ENST00000622494 PTPN5P54829 565 aa7.43□□□□□ -1.22
RPRD1B-209ENST00000622494 RAB3GAP2Q9H2M9 1393 aa7.43□□□□□ -1.22
RPRD1B-209ENST00000622494 DIP2AQ14689 1571 aa7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 TRIM26Q12899 539 aaPredicted RBP7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 RGL3Q3MIN7 710 aa7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 KMT5BQ4FZB7 885 aa7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 MPHOSPH9Q99550 1183 aa7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 BEGAINQ9BUH8 593 aa7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 PRR14Q9BWN1 585 aa7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 FAM117AQ9C073 453 aa7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 AMOTL2Q9Y2J4 779 aa7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 ADGRF5Q8IZF2 1346 aa7.42□□□□□ -1.22
RPRD1B-209ENST00000622494 COL16A1Q07092 1604 aaPredicted RBP7.41□□□□□ -1.22
RPRD1B-209ENST00000622494 PLEKHG3A1L390 1219 aa7.41□□□□□ -1.22
RPRD1B-209ENST00000622494 DDRGK1Q96HY6 314 aa7.41□□□□□ -1.22
RPRD1B-209ENST00000622494 TBX22Q9Y458 520 aa7.41□□□□□ -1.22
RPRD1B-209ENST00000622494 ROBO2Q9HCK4 1378 aa7.41□□□□□ -1.22
RPRD1B-209ENST00000622494 SPATA31E1Q6ZUB1 1445 aa7.41□□□□□ -1.22
RPRD1B-209ENST00000622494 SETD5Q9C0A6 1442 aa7.41□□□□□ -1.22
RPRD1B-209ENST00000622494 LRP6O75581 1613 aa7.41□□□□□ -1.22
RPRD1B-209ENST00000622494 USP46P62068 366 aa7.4□□□□□ -1.22
RPRD1B-209ENST00000622494 C14orf37Q86TY3 774 aa7.4□□□□□ -1.22
RPRD1B-209ENST00000622494 SPIRE2Q8WWL2 714 aa7.4□□□□□ -1.22
RPRD1B-209ENST00000622494 RGS17Q9UGC6 210 aaPredicted RBP7.4□□□□□ -1.22
RPRD1B-209ENST00000622494 PLEKHH1Q9ULM0 1364 aa7.4□□□□□ -1.22
RPRD1B-209ENST00000622494 MSH6P52701 1360 aa7.39□□□□□ -1.23
RPRD1B-209ENST00000622494 KDM4AO75164 1064 aa7.39□□□□□ -1.23
RPRD1B-209ENST00000622494 TMEM132EQ6IEE7 984 aa7.39□□□□□ -1.23
RPRD1B-209ENST00000622494 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.39□□□□□ -1.23
RPRD1B-209ENST00000622494 MST1RQ04912 1400 aa7.38□□□□□ -1.23
RPRD1B-209ENST00000622494 FAM135BQ49AJ0 1406 aa7.38□□□□□ -1.23
RPRD1B-209ENST00000622494 FUT2Q10981 343 aa7.38□□□□□ -1.23
RPRD1B-209ENST00000622494 DIXDC1Q155Q3 683 aa7.38□□□□□ -1.23
RPRD1B-209ENST00000622494 TBC1D2Q9BYX2 928 aa7.38□□□□□ -1.23
RPRD1B-209ENST00000622494 SLAIN2Q9P270 581 aa7.38□□□□□ -1.23
RPRD1B-209ENST00000622494 STK26Q9P289 416 aa7.38□□□□□ -1.23
RPRD1B-209ENST00000622494 RGPD8O14715 1765 aaPredicted RBP7.38□□□□□ -1.23
RPRD1B-209ENST00000622494 HOXA2O43364 376 aa7.37□□□□□ -1.23
RPRD1B-209ENST00000622494 ATP6V1AP38606 617 aa7.37□□□□□ -1.23
RPRD1B-209ENST00000622494 MORN1Q5T089 497 aa7.37□□□□□ -1.23
RPRD1B-209ENST00000622494 NHSL1Q5SYE7 1610 aa7.37□□□□□ -1.23
RPRD1B-209ENST00000622494 CCDC144AA2RUR9 1427 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 ADGRL3Q9HAR2 1447 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 ITGBL1O95965 494 aaPredicted RBP7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 GJA5P36382 358 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 TJAP1Q5JTD0 557 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 POTEAQ6S8J7 498 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 BRINP3Q76B58 766 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 WAPLQ7Z5K2 1190 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 NUTM1Q86Y26 1132 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 PCGF6Q9BYE7 350 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 PCDHB3Q9Y5E6 796 aa7.36□□□□□ -1.23
RPRD1B-209ENST00000622494 AHDC1Q5TGY3 1603 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms