RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 DIP2AQ14689 1571 aa12□□□□□ -0.49
IGHV3-54-201ENST00000622166 LTKP29376 864 aa11.99□□□□□ -0.49
IGHV3-54-201ENST00000622166 TBC1D9Q6ZT07 1266 aa11.99□□□□□ -0.49
IGHV3-54-201ENST00000622166 SBNO1A3KN83 1393 aa11.98□□□□□ -0.49
IGHV3-54-201ENST00000622166 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
IGHV3-54-201ENST00000622166 TBX22Q9Y458 520 aa11.98□□□□□ -0.49
IGHV3-54-201ENST00000622166 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
IGHV3-54-201ENST00000622166 KDRP35968 1356 aa11.97□□□□□ -0.49
IGHV3-54-201ENST00000622166 FSD2A1L4K1 749 aa11.97□□□□□ -0.49
IGHV3-54-201ENST00000622166 XRN1Q8IZH2 1706 aaKnown RBP11.97□□□□□ -0.49
IGHV3-54-201ENST00000622166 RTL1A6NKG5 1358 aa11.96□□□□□ -0.49
IGHV3-54-201ENST00000622166 DDX11L8A8MPP1 907 aa11.96□□□□□ -0.49
IGHV3-54-201ENST00000622166 HTATSF1O43719 755 aaKnown RBP11.96□□□□□ -0.49
IGHV3-54-201ENST00000622166 HSP90AB2PQ58FF8 381 aa11.96□□□□□ -0.49
IGHV3-54-201ENST00000622166 TTC22Q5TAA0 569 aa11.96□□□□□ -0.49
IGHV3-54-201ENST00000622166 CEP85Q6P2H3 762 aa11.96□□□□□ -0.49
IGHV3-54-201ENST00000622166 SPRYD3Q8NCJ5 442 aa11.96□□□□□ -0.49
IGHV3-54-201ENST00000622166 FLT4P35916 1363 aa11.95□□□□□ -0.5
IGHV3-54-201ENST00000622166 MAP3K19Q56UN5 1328 aa11.95□□□□□ -0.5
IGHV3-54-201ENST00000622166 PIK3C2AO00443 1686 aa11.95□□□□□ -0.5
IGHV3-54-201ENST00000622166 GSPT1P15170 499 aaKnown RBP11.95□□□□□ -0.5
IGHV3-54-201ENST00000622166 PTMSP20962 102 aa11.95□□□□□ -0.5
IGHV3-54-201ENST00000622166 MCM10Q7L590 875 aa11.95□□□□□ -0.5
IGHV3-54-201ENST00000622166 EID1Q9Y6B2 187 aa11.95□□□□□ -0.5
IGHV3-54-201ENST00000622166 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
IGHV3-54-201ENST00000622166 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
IGHV3-54-201ENST00000622166 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 TRAK2O60296 914 aa11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 HSP90AB1P08238 724 aaKnown RBP11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 RAB3GAP1Q15042 981 aa11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 CACNA1FO60840 1977 aa11.94□□□□□ -0.5
IGHV3-54-201ENST00000622166 MSH6P52701 1360 aa11.93□□□□□ -0.5
IGHV3-54-201ENST00000622166 SOS1Q07889 1333 aaPredicted RBP11.93□□□□□ -0.5
IGHV3-54-201ENST00000622166 MTHFSDQ2M296 383 aaKnown RBP11.93□□□□□ -0.5
IGHV3-54-201ENST00000622166 GAS2L2Q8NHY3 880 aa11.93□□□□□ -0.5
IGHV3-54-201ENST00000622166 ISY1Q9ULR0 285 aaKnown RBP11.93□□□□□ -0.5
IGHV3-54-201ENST00000622166 FAM208AQ9UK61 1670 aaKnown RBP11.92□□□□□ -0.5
IGHV3-54-201ENST00000622166 CCT4P50991 539 aaKnown RBP11.92□□□□□ -0.5
IGHV3-54-201ENST00000622166 RABEP1Q15276 862 aa11.92□□□□□ -0.5
IGHV3-54-201ENST00000622166 CLEC17AQ6ZS10 378 aa11.92□□□□□ -0.5
IGHV3-54-201ENST00000622166 BABAM1Q9NWV8 329 aa11.92□□□□□ -0.5
IGHV3-54-201ENST00000622166 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
IGHV3-54-201ENST00000622166 GOLGA6L3A6NEY3 463 aa11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 HMMRO75330 724 aa11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 SKOR2Q2VWA4 1001 aaPredicted RBP11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 TNPO1Q92973 898 aaKnown RBP11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 MEIS3Q99687 375 aa11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 USP26Q9BXU7 913 aa11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 OSBPL3Q9H4L5 887 aa11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 NWD1Q149M9 1564 aa11.91□□□□□ -0.5
IGHV3-54-201ENST00000622166 CD2BP2O95400 341 aaKnown RBP11.9□□□□□ -0.5
IGHV3-54-201ENST00000622166 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
IGHV3-54-201ENST00000622166 C16orf71Q8IYS4 520 aaPredicted RBP11.9□□□□□ -0.5
IGHV3-54-201ENST00000622166 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
IGHV3-54-201ENST00000622166 EYA1Q99502 592 aa11.9□□□□□ -0.5
IGHV3-54-201ENST00000622166 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
IGHV3-54-201ENST00000622166 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
IGHV3-54-201ENST00000622166 TUBGCP6Q96RT7 1819 aa11.9□□□□□ -0.5
IGHV3-54-201ENST00000622166 FER1L4A9Z1Z3 1794 aa11.9□□□□□ -0.51
IGHV3-54-201ENST00000622166 NUTM2FA1L443 756 aa11.89□□□□□ -0.51
IGHV3-54-201ENST00000622166 FOXO3O43524 673 aa11.89□□□□□ -0.51
IGHV3-54-201ENST00000622166 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
IGHV3-54-201ENST00000622166 XRCC6P12956 609 aaKnown RBP eCLIP11.88□□□□□ -0.51
IGHV3-54-201ENST00000622166 SDSP20132 328 aa11.88□□□□□ -0.51
IGHV3-54-201ENST00000622166 AMPHP49418 695 aa11.88□□□□□ -0.51
IGHV3-54-201ENST00000622166 MRE11P49959 708 aa11.88□□□□□ -0.51
IGHV3-54-201ENST00000622166 G2E3Q7L622 706 aa11.88□□□□□ -0.51
IGHV3-54-201ENST00000622166 THEMISQ8N1K5 641 aaPredicted RBP11.88□□□□□ -0.51
IGHV3-54-201ENST00000622166 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
IGHV3-54-201ENST00000622166 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
IGHV3-54-201ENST00000622166 CEBPAP49715 358 aaPredicted RBP11.87□□□□□ -0.51
IGHV3-54-201ENST00000622166 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
IGHV3-54-201ENST00000622166 OTUD7AQ8TE49 926 aaPredicted RBP11.87□□□□□ -0.51
IGHV3-54-201ENST00000622166 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
IGHV3-54-201ENST00000622166 GNAT3A8MTJ3 354 aa11.86□□□□□ -0.51
IGHV3-54-201ENST00000622166 SMARCA5O60264 1052 aaPredicted RBP11.86□□□□□ -0.51
IGHV3-54-201ENST00000622166 GNAI2P04899 355 aa11.86□□□□□ -0.51
IGHV3-54-201ENST00000622166 GNAI3P08754 354 aa11.86□□□□□ -0.51
IGHV3-54-201ENST00000622166 HOXC9P31274 260 aa11.86□□□□□ -0.51
IGHV3-54-201ENST00000622166 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
IGHV3-54-201ENST00000622166 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
IGHV3-54-201ENST00000622166 MIS18AQ9NYP9 233 aa11.86□□□□□ -0.51
IGHV3-54-201ENST00000622166 MAP3K5Q99683 1374 aa11.85□□□□□ -0.51
IGHV3-54-201ENST00000622166 REC8O95072 547 aa11.85□□□□□ -0.51
IGHV3-54-201ENST00000622166 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
IGHV3-54-201ENST00000622166 MED1Q15648 1581 aaPredicted RBP11.84□□□□□ -0.51
IGHV3-54-201ENST00000622166 ERC2O15083 957 aa11.84□□□□□ -0.51
IGHV3-54-201ENST00000622166 CYP2E1P05181 493 aaPredicted RBP11.84□□□□□ -0.51
IGHV3-54-201ENST00000622166 HSP90AA1P07900 732 aaKnown RBP11.84□□□□□ -0.51
IGHV3-54-201ENST00000622166 PDE1AP54750 535 aa11.84□□□□□ -0.51
IGHV3-54-201ENST00000622166 NLRP6P59044 892 aa11.84□□□□□ -0.51
IGHV3-54-201ENST00000622166 NUCB2P80303 420 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms