RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SPTLC3Q9NUV7 552 aa9.13□□□□□ -0.95
TRIM49B-202ENST00000622138 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRIM49B-202ENST00000622138 LRRC7Q96NW7 1537 aa9.13□□□□□ -0.95
TRIM49B-202ENST00000622138 TMEM131LA2VDJ0 1609 aa9.13□□□□□ -0.95
TRIM49B-202ENST00000622138 FYB1O15117 783 aa9.13□□□□□ -0.95
TRIM49B-202ENST00000622138 ITPRIPQ8IWB1 547 aa9.13□□□□□ -0.95
TRIM49B-202ENST00000622138 SOX12O15370 315 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 CTIFO43310 598 aaKnown RBP9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 BAG4O95429 457 aaKnown RBP9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 CHAF1AQ13111 956 aaPredicted RBP9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 LRSAM1Q6UWE0 723 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 TMEM57Q8N5G2 664 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 PRAM1Q96QH2 718 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 NOB1Q9ULX3 412 aaKnown RBP9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 ZFYVE9O95405 1425 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 PREX1Q8TCU6 1659 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 RICTORQ6R327 1708 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 PTMAP06454 111 aaKnown RBP9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 NOLC1Q14978 699 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 TERF2Q15554 542 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 CTR9Q6PD62 1173 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 ATF7IPQ6VMQ6 1270 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 AEBP1Q8IUX7 1158 aa9.12□□□□□ -0.95
TRIM49B-202ENST00000622138 KIF20BQ96Q89 1820 aa9.11□□□□□ -0.95
TRIM49B-202ENST00000622138 MED14O60244 1454 aa9.11□□□□□ -0.95
TRIM49B-202ENST00000622138 YTHDC2Q9H6S0 1430 aaKnown RBP9.11□□□□□ -0.95
TRIM49B-202ENST00000622138 CT47B1P0C2W7 299 aaPredicted RBP9.11□□□□□ -0.95
TRIM49B-202ENST00000622138 FBLN1P23142 703 aa9.11□□□□□ -0.95
TRIM49B-202ENST00000622138 HDAC1Q13547 482 aaPredicted RBP9.11□□□□□ -0.95
TRIM49B-202ENST00000622138 HOMEZQ8IX15 550 aa9.11□□□□□ -0.95
TRIM49B-202ENST00000622138 TSC1Q92574 1164 aa9.11□□□□□ -0.95
TRIM49B-202ENST00000622138 NEO1Q92859 1461 aa9.11□□□□□ -0.95
TRIM49B-202ENST00000622138 IGSF3O75054 1194 aa9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 CAVIN1Q6NZI2 390 aaKnown RBP9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 DDX41Q9UJV9 622 aaKnown RBP9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 CDC42BPGQ6DT37 1551 aa9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 PNPLA6Q8IY17 1366 aa9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 HSP90B1P14625 803 aaKnown RBP9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 PRIM1P49642 420 aaKnown RBP9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 MAPK8IP2Q13387 824 aaPredicted RBP9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 ZBTB40Q9NUA8 1239 aa9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 FEZ2Q9UHY8 353 aaPredicted RBP9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 CTNNA3Q9UI47 895 aa9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 MORC2Q9Y6X9 1032 aaPredicted RBP9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 ARHGEF40Q8TER5 1519 aa9.1□□□□□ -0.95
TRIM49B-202ENST00000622138 IL16Q14005 1332 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 APPP05067 770 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 SSFA2P28290 1259 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 CNPY4Q8N129 248 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 JARID2Q92833 1246 aaPredicted RBP9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 SLC52A1Q9NWF4 448 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 DDX19BQ9UMR2 479 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 AK9Q5TCS8 1911 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 ALKQ9UM73 1620 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 K7ELQ4 463 aaPredicted RBP9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 CERS3Q8IU89 383 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 CNKSR2Q8WXI2 1034 aa9.09□□□□□ -0.95
TRIM49B-202ENST00000622138 FAM135BQ49AJ0 1406 aa9.08□□□□□ -0.96
TRIM49B-202ENST00000622138 DIAPH1O60610 1272 aaKnown RBP9.08□□□□□ -0.96
TRIM49B-202ENST00000622138 NUCB2P80303 420 aa9.08□□□□□ -0.96
TRIM49B-202ENST00000622138 FBXO31Q5XUX0 539 aaPredicted RBP9.08□□□□□ -0.96
TRIM49B-202ENST00000622138 KRT222Q8N1A0 295 aa9.08□□□□□ -0.96
TRIM49B-202ENST00000622138 THUMPD2Q9BTF0 503 aaKnown RBP9.08□□□□□ -0.96
TRIM49B-202ENST00000622138 LMBRD1Q9NUN5 540 aa9.08□□□□□ -0.96
TRIM49B-202ENST00000622138 TERF2IPQ9NYB0 399 aa9.08□□□□□ -0.96
TRIM49B-202ENST00000622138 REREQ9P2R6 1566 aa9.08□□□□□ -0.96
TRIM49B-202ENST00000622138 CDK19Q9BWU1 502 aa9.07□□□□□ -0.96
TRIM49B-202ENST00000622138 CABP1Q9NZU7 370 aa9.07□□□□□ -0.96
TRIM49B-202ENST00000622138 PRKAR2BP31323 418 aa9.07□□□□□ -0.96
TRIM49B-202ENST00000622138 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
TRIM49B-202ENST00000622138 KIF16BQ96L93 1317 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 RIOK3O14730 519 aaKnown RBP9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 NUCB1Q02818 461 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 PHACTR3Q96KR7 559 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 MYCBPQ99417 103 aaPredicted RBP9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 LNPKQ9C0E8 428 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 C1orf115Q9H7X2 142 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 KCNG1Q9UIX4 513 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 MYCNP04198 464 aaPredicted RBP9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 NCBP1Q09161 790 aaKnown RBP9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 TSPYL6Q8N831 410 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 CEP120Q8N960 986 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 POLKQ9UBT6 870 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 RIMBP3CA6NJZ7 1639 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 RIMBP3BA6NNM3 1639 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 RIMBP3Q9UFD9 1639 aa9.06□□□□□ -0.96
TRIM49B-202ENST00000622138 RAD50Q92878 1312 aa9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 PPIP5K1Q6PFW1 1433 aa9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 SETD1AO15047 1707 aaKnown RBP9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 MBD3O95983 291 aa9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 CYP2E1P05181 493 aaPredicted RBP9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 HMOX1P09601 288 aa9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 MCTP1Q6DN14 999 aa9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 HDGFL2Q7Z4V5 671 aaPredicted RBP9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 FAM184AQ8NB25 1140 aa9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 TPM3P06753 285 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms