RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
TARDBP-227ENST00000622057 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
TARDBP-227ENST00000622057 KAT6BQ8WYB5 2073 aa12.98□□□□□ -0.33
TARDBP-227ENST00000622057 TATP17735 454 aaPredicted RBP12.98□□□□□ -0.33
TARDBP-227ENST00000622057 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
TARDBP-227ENST00000622057 KLHL34Q8N239 644 aa12.97□□□□□ -0.33
TARDBP-227ENST00000622057 PPM1GO15355 546 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-227ENST00000622057 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
TARDBP-227ENST00000622057 POLR3GLQ9BT43 218 aa12.96□□□□□ -0.33
TARDBP-227ENST00000622057 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.33
TARDBP-227ENST00000622057 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.33
TARDBP-227ENST00000622057 CCNL1Q9UK58 526 aaPredicted RBP12.96□□□□□ -0.33
TARDBP-227ENST00000622057 RTL1A6NKG5 1358 aa12.95□□□□□ -0.34
TARDBP-227ENST00000622057 PNPLA7Q6ZV29 1317 aa12.95□□□□□ -0.34
TARDBP-227ENST00000622057 MSH5O43196 834 aa12.95□□□□□ -0.34
TARDBP-227ENST00000622057 POLD1P28340 1107 aa12.95□□□□□ -0.34
TARDBP-227ENST00000622057 SMG6Q86US8 1419 aaKnown RBP12.95□□□□□ -0.34
TARDBP-227ENST00000622057 BTAF1O14981 1849 aa12.95□□□□□ -0.34
TARDBP-227ENST00000622057 CGNL1Q0VF96 1302 aa12.94□□□□□ -0.34
TARDBP-227ENST00000622057 MEGF6O75095 1541 aa12.94□□□□□ -0.34
TARDBP-227ENST00000622057 MYOM1P52179 1685 aa12.94□□□□□ -0.34
TARDBP-227ENST00000622057 EMILIN1Q9Y6C2 1016 aa12.94□□□□□ -0.34
TARDBP-227ENST00000622057 GPR162Q16538 588 aa12.93□□□□□ -0.34
TARDBP-227ENST00000622057 MPRIPQ6WCQ1 1025 aa12.93□□□□□ -0.34
TARDBP-227ENST00000622057 NSD2O96028 1365 aa12.93□□□□□ -0.34
TARDBP-227ENST00000622057 INSRP06213 1382 aa12.93□□□□□ -0.34
TARDBP-227ENST00000622057 PELP1Q8IZL8 1130 aaKnown RBP12.92□□□□□ -0.34
TARDBP-227ENST00000622057 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
TARDBP-227ENST00000622057 FLT4P35916 1363 aa12.92□□□□□ -0.34
TARDBP-227ENST00000622057 NSD3Q9BZ95 1437 aa12.91□□□□□ -0.34
TARDBP-227ENST00000622057 FAM208AQ9UK61 1670 aaKnown RBP12.91□□□□□ -0.34
TARDBP-227ENST00000622057 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
TARDBP-227ENST00000622057 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
TARDBP-227ENST00000622057 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
TARDBP-227ENST00000622057 RGPD2P0DJD1 1756 aa12.9□□□□□ -0.34
TARDBP-227ENST00000622057 CYP27B1O15528 508 aa12.9□□□□□ -0.34
TARDBP-227ENST00000622057 COL23A1Q86Y22 540 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-227ENST00000622057 ZNF784Q8NCA9 323 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-227ENST00000622057 KIF24Q5T7B8 1368 aa12.89□□□□□ -0.35
TARDBP-227ENST00000622057 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-227ENST00000622057 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
TARDBP-227ENST00000622057 EYA1Q99502 592 aa12.88□□□□□ -0.35
TARDBP-227ENST00000622057 SPG7Q9UQ90 795 aa12.88□□□□□ -0.35
TARDBP-227ENST00000622057 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
TARDBP-227ENST00000622057 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
TARDBP-227ENST00000622057 POLKQ9UBT6 870 aa12.87□□□□□ -0.35
TARDBP-227ENST00000622057 UTRNP46939 3433 aa12.87□□□□□ -0.35
TARDBP-227ENST00000622057 DOT1LQ8TEK3 1739 aa12.87□□□□□ -0.35
TARDBP-227ENST00000622057 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
TARDBP-227ENST00000622057 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
TARDBP-227ENST00000622057 HMGB2P26583 209 aaKnown RBP12.86□□□□□ -0.35
TARDBP-227ENST00000622057 PIGBQ92521 554 aa12.86□□□□□ -0.35
TARDBP-227ENST00000622057 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-227ENST00000622057 FLAD1Q8NFF5 587 aa12.85□□□□□ -0.35
TARDBP-227ENST00000622057 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
TARDBP-227ENST00000622057 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
TARDBP-227ENST00000622057 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
TARDBP-227ENST00000622057 AK7Q96M32 723 aa12.84□□□□□ -0.35
TARDBP-227ENST00000622057 PANK3Q9H999 370 aa12.84□□□□□ -0.35
TARDBP-227ENST00000622057 SHANK3Q9BYB0 1731 aa12.84□□□□□ -0.35
TARDBP-227ENST00000622057 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
TARDBP-227ENST00000622057 PHF14O94880 888 aa12.83□□□□□ -0.36
TARDBP-227ENST00000622057 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
TARDBP-227ENST00000622057 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
TARDBP-227ENST00000622057 TMOD3Q9NYL9 352 aa12.83□□□□□ -0.36
TARDBP-227ENST00000622057 LY75O60449 1722 aa12.82□□□□□ -0.36
TARDBP-227ENST00000622057 PHKG2P15735 406 aa12.82□□□□□ -0.36
TARDBP-227ENST00000622057 EIF4A2Q14240 407 aaKnown RBP12.82□□□□□ -0.36
TARDBP-227ENST00000622057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.363e-7■■□□□ 13.1
TARDBP-227ENST00000622057 KIF20BQ96Q89 1820 aa12.82□□□□□ -0.36
TARDBP-227ENST00000622057 LOC102724428A0A0B4J2F2 783 aa12.81□□□□□ -0.36
TARDBP-227ENST00000622057 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
TARDBP-227ENST00000622057 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
TARDBP-227ENST00000622057 SIK1P57059 783 aa12.81□□□□□ -0.36
TARDBP-227ENST00000622057 AMIGO3Q86WK7 504 aa12.81□□□□□ -0.36
TARDBP-227ENST00000622057 CCER1Q8TC90 406 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-227ENST00000622057 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
TARDBP-227ENST00000622057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
TARDBP-227ENST00000622057 YBX3P16989 372 aaKnown RBP eCLIP12.8□□□□□ -0.368e-13■□□□□ 8.1
TARDBP-227ENST00000622057 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
TARDBP-227ENST00000622057 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
TARDBP-227ENST00000622057 ITPK1Q13572 414 aa12.78□□□□□ -0.36
TARDBP-227ENST00000622057 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
TARDBP-227ENST00000622057 MORC1Q86VD1 984 aa12.78□□□□□ -0.36
TARDBP-227ENST00000622057 ATG3Q9NT62 314 aa12.78□□□□□ -0.36
TARDBP-227ENST00000622057 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
TARDBP-227ENST00000622057 TUBGCP6Q96RT7 1819 aa12.78□□□□□ -0.36
TARDBP-227ENST00000622057 NCAPD2Q15021 1401 aa12.78□□□□□ -0.36
TARDBP-227ENST00000622057 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
TARDBP-227ENST00000622057 GNPATO15228 680 aa12.77□□□□□ -0.37
TARDBP-227ENST00000622057 SSFA2P28290 1259 aa12.77□□□□□ -0.37
TARDBP-227ENST00000622057 C1QTNF8P60827 252 aa12.77□□□□□ -0.37
TARDBP-227ENST00000622057 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
TARDBP-227ENST00000622057 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.37
TARDBP-227ENST00000622057 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
TARDBP-227ENST00000622057 IGSF1Q8N6C5 1336 aa12.76□□□□□ -0.37
TARDBP-227ENST00000622057 ERVV-2B6SEH9 535 aa12.75□□□□□ -0.37
TARDBP-227ENST00000622057 GIGYF1O75420 1035 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-227ENST00000622057 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
TARDBP-227ENST00000622057 CABP4P57796 275 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms