RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ABCC6O95255 1503 aa27.59■■■□□ 2.01
SPAST-204ENST00000621856 CRB1P82279 1406 aa27.59■■■□□ 2.01
SPAST-204ENST00000621856 NCAPD2Q15021 1401 aa27.59■■■□□ 2.01
SPAST-204ENST00000621856 ERBB3P21860 1342 aa27.58■■■□□ 2.01
SPAST-204ENST00000621856 LTBP4Q8N2S1 1624 aa27.58■■■□□ 2.01
SPAST-204ENST00000621856 ZNF428Q96B54 188 aa27.58■■■□□ 2.01
SPAST-204ENST00000621856 CPDO75976 1380 aa27.57■■■□□ 2
SPAST-204ENST00000621856 KIAA0232Q92628 1395 aa27.57■■■□□ 2
SPAST-204ENST00000621856 ALDH1L2Q3SY69 923 aa27.57■■■□□ 2
SPAST-204ENST00000621856 CHL1O00533 1208 aa27.56■■■□□ 2
SPAST-204ENST00000621856 CHRNA2Q15822 529 aa27.56■■■□□ 2
SPAST-204ENST00000621856 PANK1Q8TE04 598 aa27.56■■■□□ 2
SPAST-204ENST00000621856 HAP1P54257 671 aaPredicted RBP27.55■■■□□ 2
SPAST-204ENST00000621856 ZKSCAN2Q63HK3 967 aa27.55■■■□□ 2
SPAST-204ENST00000621856 LRRC37A3O60309 1634 aa27.55■■■□□ 2
SPAST-204ENST00000621856 VAMP4O75379 141 aa27.55■■■□□ 2
SPAST-204ENST00000621856 TWISTNBQ3B726 338 aaPredicted RBP27.55■■■□□ 2
SPAST-204ENST00000621856 TSPYL6Q8N831 410 aa27.55■■■□□ 2
SPAST-204ENST00000621856 PLEKHO1Q53GL0 409 aaPredicted RBP27.54■■■□□ 2
SPAST-204ENST00000621856 LMO7Q8WWI1 1683 aa27.53■■■□□ 2
SPAST-204ENST00000621856 FAM208AQ9UK61 1670 aaKnown RBP27.53■■■□□ 2
SPAST-204ENST00000621856 ABCA3Q99758 1704 aa27.53■■■□□ 2
SPAST-204ENST00000621856 ELL2O00472 640 aaPredicted RBP27.53■■■□□ 2
SPAST-204ENST00000621856 C8orf58Q8NAV2 365 aa27.53■■■□□ 2
SPAST-204ENST00000621856 CSB-PGBD3P0DP91 1061 aa27.53■■■□□ 2
SPAST-204ENST00000621856 NLRP2Q9NX02 1062 aa27.53■■■□□ 2
SPAST-204ENST00000621856 KIF16BQ96L93 1317 aa27.52■■■□□ 2
SPAST-204ENST00000621856 MS4A1P11836 297 aa27.52■■■□□ 2
SPAST-204ENST00000621856 COG6Q9Y2V7 657 aa27.52■■■□□ 2
SPAST-204ENST00000621856 ROBO1Q9Y6N7 1651 aa27.52■■■□□ 2
SPAST-204ENST00000621856 AMOTQ4VCS5 1084 aa27.51■■□□□ 1.99
SPAST-204ENST00000621856 TSPYL4Q9UJ04 414 aa27.51■■□□□ 1.99
SPAST-204ENST00000621856 TNNQ9UQP3 1299 aa27.51■■□□□ 1.99
SPAST-204ENST00000621856 ZNF530Q6P9A1 599 aaPredicted RBP27.5■■□□□ 1.99
SPAST-204ENST00000621856 CLUAP1Q96AJ1 413 aa27.5■■□□□ 1.99
SPAST-204ENST00000621856 PRDM11Q9NQV5 511 aa27.5■■□□□ 1.99
SPAST-204ENST00000621856 NOB1Q9ULX3 412 aaKnown RBP27.5■■□□□ 1.99
SPAST-204ENST00000621856 FTSJ3Q8IY81 847 aaKnown RBP27.49■■□□□ 1.99
SPAST-204ENST00000621856 IL17REQ8NFR9 667 aa27.49■■□□□ 1.99
SPAST-204ENST00000621856 IPO8O15397 1037 aaKnown RBP27.48■■□□□ 1.99
SPAST-204ENST00000621856 RLBP1P12271 317 aa27.48■■□□□ 1.99
SPAST-204ENST00000621856 DZIP1LQ8IYY4 767 aaKnown RBP27.48■■□□□ 1.99
SPAST-204ENST00000621856 MIS18AQ9NYP9 233 aa27.48■■□□□ 1.99
SPAST-204ENST00000621856 AKAP4Q5JQC9 854 aa27.47■■□□□ 1.99
SPAST-204ENST00000621856 ATF7IPQ6VMQ6 1270 aa27.47■■□□□ 1.99
SPAST-204ENST00000621856 RAPGEF4Q8WZA2 1011 aa27.46■■□□□ 1.99
SPAST-204ENST00000621856 BRPF1P55201 1214 aaPredicted RBP27.45■■□□□ 1.99
SPAST-204ENST00000621856 C1orf141Q5JVX7 400 aa27.45■■□□□ 1.99
SPAST-204ENST00000621856 MRPL50Q8N5N7 158 aaKnown RBP27.45■■□□□ 1.99
SPAST-204ENST00000621856 TRIM27P14373 513 aa27.44■■□□□ 1.98
SPAST-204ENST00000621856 AHDC1Q5TGY3 1603 aaPredicted RBP27.44■■□□□ 1.98
SPAST-204ENST00000621856 KRT24Q2M2I5 525 aa27.44■■□□□ 1.98
SPAST-204ENST00000621856 TAF7Q15545 349 aaPredicted RBP27.43■■□□□ 1.98
SPAST-204ENST00000621856 TCERG1O14776 1098 aaKnown RBP27.42■■□□□ 1.98
SPAST-204ENST00000621856 TATP17735 454 aaPredicted RBP27.42■■□□□ 1.98
SPAST-204ENST00000621856 CEMIPQ8WUJ3 1361 aa27.42■■□□□ 1.98
SPAST-204ENST00000621856 MVPQ14764 893 aaKnown RBP27.41■■□□□ 1.98
SPAST-204ENST00000621856 BABAM1Q9NWV8 329 aa27.41■■□□□ 1.98
SPAST-204ENST00000621856 VIRMAQ69YN4 1812 aaKnown RBP27.4■■□□□ 1.98
SPAST-204ENST00000621856 AAMPQ13685 434 aa27.39■■□□□ 1.98
SPAST-204ENST00000621856 LGR6Q9HBX8 967 aa27.39■■□□□ 1.98
SPAST-204ENST00000621856 MPRIPQ6WCQ1 1025 aa27.38■■□□□ 1.97
SPAST-204ENST00000621856 MEGF6O75095 1541 aa27.37■■□□□ 1.97
SPAST-204ENST00000621856 WDR17Q8IZU2 1322 aa27.37■■□□□ 1.97
SPAST-204ENST00000621856 TEFQ10587 303 aa27.36■■□□□ 1.97
SPAST-204ENST00000621856 ARHGAP45Q92619 1136 aa27.36■■□□□ 1.97
SPAST-204ENST00000621856 SPG7Q9UQ90 795 aa27.36■■□□□ 1.97
SPAST-204ENST00000621856 COL5A2P05997 1499 aaPredicted RBP27.36■■□□□ 1.97
SPAST-204ENST00000621856 RNMTO43148 476 aaKnown RBP27.36■■□□□ 1.97
SPAST-204ENST00000621856 ITPRIPQ8IWB1 547 aa27.36■■□□□ 1.97
SPAST-204ENST00000621856 OVOS2A0A0G2JMS6 1433 aa27.35■■□□□ 1.97
SPAST-204ENST00000621856 CENPQQ7L2Z9 268 aaPredicted RBP27.35■■□□□ 1.97
SPAST-204ENST00000621856 TOM1L2Q6ZVM7 507 aa27.34■■□□□ 1.97
SPAST-204ENST00000621856 TMEM57Q8N5G2 664 aa27.34■■□□□ 1.97
SPAST-204ENST00000621856 TSHZ2Q9NRE2 1034 aa27.34■■□□□ 1.97
SPAST-204ENST00000621856 DDX19BQ9UMR2 479 aa27.33■■□□□ 1.97
SPAST-204ENST00000621856 KDM2BQ8NHM5 1336 aa27.33■■□□□ 1.97
SPAST-204ENST00000621856 PLEKHG2Q9H7P9 1386 aa27.33■■□□□ 1.97
SPAST-204ENST00000621856 PHLPP1O60346 1717 aa27.33■■□□□ 1.97
SPAST-204ENST00000621856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.33■■□□□ 1.961e-6■□□□□ 9.6
SPAST-204ENST00000621856 KDM3BQ7LBC6 1761 aa27.32■■□□□ 1.96
SPAST-204ENST00000621856 API5Q9BZZ5 524 aaKnown RBP27.32■■□□□ 1.96
SPAST-204ENST00000621856 COL22A1Q8NFW1 1626 aaPredicted RBP27.31■■□□□ 1.96
SPAST-204ENST00000621856 EVA1CP58658 441 aa27.31■■□□□ 1.96
SPAST-204ENST00000621856 PKD1L3Q7Z443 1732 aa27.3■■□□□ 1.96
SPAST-204ENST00000621856 TOM1O60784 492 aa27.3■■□□□ 1.96
SPAST-204ENST00000621856 STRN4Q9NRL3 753 aa27.3■■□□□ 1.96
SPAST-204ENST00000621856 SOS1Q07889 1333 aaPredicted RBP27.3■■□□□ 1.96
SPAST-204ENST00000621856 PARP4Q9UKK3 1724 aaKnown RBP27.29■■□□□ 1.96
SPAST-204ENST00000621856 ADAMTS7Q9UKP4 1686 aa27.29■■□□□ 1.96
SPAST-204ENST00000621856 BTBD11A6QL63 1104 aa27.28■■□□□ 1.96
SPAST-204ENST00000621856 PHKG2P15735 406 aa27.27■■□□□ 1.96
SPAST-204ENST00000621856 SCN11AQ9UI33 1791 aa27.27■■□□□ 1.96
SPAST-204ENST00000621856 IFNL2Q8IZJ0 200 aa27.27■■□□□ 1.96
SPAST-204ENST00000621856 SIPA1L3O60292 1781 aaPredicted RBP27.26■■□□□ 1.95
SPAST-204ENST00000621856 ABCC4O15439 1325 aa27.26■■□□□ 1.95
SPAST-204ENST00000621856 PIP4K2BP78356 416 aa27.26■■□□□ 1.95
SPAST-204ENST00000621856 CARD10Q9BWT7 1032 aa27.26■■□□□ 1.95
SPAST-204ENST00000621856 STK31Q9BXU1 1019 aa27.26■■□□□ 1.95
SPAST-204ENST00000621856 COL14A1Q05707 1796 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms