RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 TNS2Q63HR2 1409 aa24.92■■□□□ 1.58
CIRBP-245ENST00000621399 MARCH10Q8NA82 808 aaPredicted RBP24.91■■□□□ 1.58
CIRBP-245ENST00000621399 OVOS2A0A0G2JMS6 1433 aa24.91■■□□□ 1.58
CIRBP-245ENST00000621399 DDX54Q8TDD1 881 aaKnown RBP24.9■■□□□ 1.58
CIRBP-245ENST00000621399 HMOX1P09601 288 aa24.89■■□□□ 1.58
CIRBP-245ENST00000621399 FAM196AQ6ZSG2 479 aa24.89■■□□□ 1.58
CIRBP-245ENST00000621399 SPG7Q9UQ90 795 aa24.87■■□□□ 1.57
CIRBP-245ENST00000621399 KDRP35968 1356 aa24.86■■□□□ 1.57
CIRBP-245ENST00000621399 RGPD1P0DJD0 1748 aa24.86■■□□□ 1.57
CIRBP-245ENST00000621399 U2AF1L5P0DN76 240 aaPredicted RBP24.85■■□□□ 1.57
CIRBP-245ENST00000621399 U2AF1Q01081 240 aaKnown RBP eCLIP24.85■■□□□ 1.577e-7■■■■□ 23.3
CIRBP-245ENST00000621399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.85■■□□□ 1.57
CIRBP-245ENST00000621399 PLEKHO1Q53GL0 409 aaPredicted RBP24.83■■□□□ 1.57
CIRBP-245ENST00000621399 PCDH11XQ9BZA7 1347 aa24.83■■□□□ 1.56
CIRBP-245ENST00000621399 PCDH11YQ9BZA8 1340 aa24.83■■□□□ 1.56
CIRBP-245ENST00000621399 EP400Q96L91 3159 aa24.82■■□□□ 1.56
CIRBP-245ENST00000621399 PLEKHG2Q9H7P9 1386 aa24.81■■□□□ 1.56
CIRBP-245ENST00000621399 AMOTQ4VCS5 1084 aa24.81■■□□□ 1.56
CIRBP-245ENST00000621399 CYP27B1O15528 508 aa24.79■■□□□ 1.56
CIRBP-245ENST00000621399 TRIM37O94972 964 aa24.79■■□□□ 1.56
CIRBP-245ENST00000621399 CCDC125Q86Z20 511 aa24.79■■□□□ 1.56
CIRBP-245ENST00000621399 BCL9O00512 1426 aa24.78■■□□□ 1.56
CIRBP-245ENST00000621399 FCHSD2O94868 740 aa24.77■■□□□ 1.56
CIRBP-245ENST00000621399 SF3B2Q13435 895 aaKnown RBP24.77■■□□□ 1.56
CIRBP-245ENST00000621399 IFNL2Q8IZJ0 200 aa24.77■■□□□ 1.56
CIRBP-245ENST00000621399 RSPH6AQ9H0K4 717 aa24.77■■□□□ 1.56
CIRBP-245ENST00000621399 PRKAR2BP31323 418 aa24.76■■□□□ 1.55
CIRBP-245ENST00000621399 ZNF530Q6P9A1 599 aaPredicted RBP24.76■■□□□ 1.55
CIRBP-245ENST00000621399 ACSBG1Q96GR2 724 aa24.76■■□□□ 1.55
CIRBP-245ENST00000621399 PHKG2P15735 406 aa24.75■■□□□ 1.55
CIRBP-245ENST00000621399 PKD1L3Q7Z443 1732 aa24.75■■□□□ 1.55
CIRBP-245ENST00000621399 WDR43Q15061 677 aaKnown RBP eCLIP24.74■■□□□ 1.55
CIRBP-245ENST00000621399 C1orf141Q5JVX7 400 aa24.73■■□□□ 1.55
CIRBP-245ENST00000621399 SHANK3Q9BYB0 1731 aa24.72■■□□□ 1.55
CIRBP-245ENST00000621399 KCNQ2O43526 872 aa24.72■■□□□ 1.55
CIRBP-245ENST00000621399 NKX1-1Q15270 411 aaPredicted RBP24.72■■□□□ 1.55
CIRBP-245ENST00000621399 MTHFSDQ2M296 383 aaKnown RBP24.72■■□□□ 1.55
CIRBP-245ENST00000621399 BCL11BQ9C0K0 894 aaPredicted RBP24.72■■□□□ 1.55
CIRBP-245ENST00000621399 CCDC184Q52MB2 194 aa24.71■■□□□ 1.55
CIRBP-245ENST00000621399 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
CIRBP-245ENST00000621399 SYTL4Q96C24 671 aaPredicted RBP24.71■■□□□ 1.55
CIRBP-245ENST00000621399 PHACTR3Q96KR7 559 aa24.71■■□□□ 1.55
CIRBP-245ENST00000621399 APBA3O96018 575 aa24.7■■□□□ 1.54
CIRBP-245ENST00000621399 HSP90AB1P08238 724 aaKnown RBP24.7■■□□□ 1.54
CIRBP-245ENST00000621399 PRIM1P49642 420 aaKnown RBP24.7■■□□□ 1.54
CIRBP-245ENST00000621399 PTF1AQ7RTS3 328 aa24.7■■□□□ 1.54
CIRBP-245ENST00000621399 PNNQ9H307 717 aaKnown RBP24.7■■□□□ 1.54
CIRBP-245ENST00000621399 NEFMP07197 916 aa24.69■■□□□ 1.54
CIRBP-245ENST00000621399 MRS2Q9HD23 443 aa24.69■■□□□ 1.54
CIRBP-245ENST00000621399 AKAP4Q5JQC9 854 aa24.68■■□□□ 1.54
CIRBP-245ENST00000621399 GAS2L2Q8NHY3 880 aa24.68■■□□□ 1.54
CIRBP-245ENST00000621399 BAG6P46379 1132 aa24.67■■□□□ 1.54
CIRBP-245ENST00000621399 DCAF5Q96JK2 942 aa24.67■■□□□ 1.54
CIRBP-245ENST00000621399 DEFB132Q7Z7B7 95 aa24.66■■□□□ 1.54
CIRBP-245ENST00000621399 ADAMTS8Q9UP79 889 aa24.66■■□□□ 1.54
CIRBP-245ENST00000621399 MPRIPQ6WCQ1 1025 aa24.65■■□□□ 1.54
CIRBP-245ENST00000621399 PLEKHF1Q96S99 279 aa24.65■■□□□ 1.54
CIRBP-245ENST00000621399 MAPK8IP3Q9UPT6 1336 aa24.63■■□□□ 1.53
CIRBP-245ENST00000621399 EN1Q05925 392 aaPredicted RBP24.63■■□□□ 1.53
CIRBP-245ENST00000621399 SBF2Q86WG5 1849 aa24.62■■□□□ 1.53
CIRBP-245ENST00000621399 GNAT3A8MTJ3 354 aa24.61■■□□□ 1.53
CIRBP-245ENST00000621399 ERVV-2B6SEH9 535 aa24.61■■□□□ 1.53
CIRBP-245ENST00000621399 NHSQ6T4R5 1651 aa24.61■■□□□ 1.53
CIRBP-245ENST00000621399 MAP3K5Q99683 1374 aa24.6■■□□□ 1.53
CIRBP-245ENST00000621399 CCDC146Q8IYE0 955 aa24.6■■□□□ 1.53
CIRBP-245ENST00000621399 PNISRQ8TF01 805 aaKnown RBP24.6■■□□□ 1.53
CIRBP-245ENST00000621399 TMOD3Q9NYL9 352 aa24.6■■□□□ 1.53
CIRBP-245ENST00000621399 DOT1LQ8TEK3 1739 aa24.6■■□□□ 1.53
CIRBP-245ENST00000621399 TNS1Q9HBL0 1735 aaKnown RBP24.6■■□□□ 1.53
CIRBP-245ENST00000621399 KDM6AO15550 1401 aaPredicted RBP24.6■■□□□ 1.53
CIRBP-245ENST00000621399 PLSCR1O15162 318 aa24.59■■□□□ 1.53
CIRBP-245ENST00000621399 CABP4P57796 275 aa24.59■■□□□ 1.53
CIRBP-245ENST00000621399 LGR6Q9HBX8 967 aa24.59■■□□□ 1.53
CIRBP-245ENST00000621399 RNMTO43148 476 aaKnown RBP24.58■■□□□ 1.53
CIRBP-245ENST00000621399 PIGBQ92521 554 aa24.58■■□□□ 1.53
CIRBP-245ENST00000621399 RUNDC1Q96C34 613 aa24.58■■□□□ 1.53
CIRBP-245ENST00000621399 CAMKK2Q96RR4 588 aa24.58■■□□□ 1.53
CIRBP-245ENST00000621399 EZH2Q15910 746 aaKnown RBP24.57■■□□□ 1.52
CIRBP-245ENST00000621399 SRCAPQ6ZRS2 3230 aa24.57■■□□□ 1.52
CIRBP-245ENST00000621399 NFE2L2Q16236 605 aa24.56■■□□□ 1.52
CIRBP-245ENST00000621399 RTF1Q92541 710 aaKnown RBP24.56■■□□□ 1.52
CIRBP-245ENST00000621399 KAT6BQ8WYB5 2073 aa24.56■■□□□ 1.52
CIRBP-245ENST00000621399 TOGARAM1Q9Y4F4 1720 aa24.55■■□□□ 1.52
CIRBP-245ENST00000621399 NFATC2IPQ8NCF5 419 aa24.55■■□□□ 1.52
CIRBP-245ENST00000621399 IL17REQ8NFR9 667 aa24.54■■□□□ 1.52
CIRBP-245ENST00000621399 HTATSF1O43719 755 aaKnown RBP24.53■■□□□ 1.52
CIRBP-245ENST00000621399 SLC52A2Q9HAB3 445 aa24.53■■□□□ 1.52
CIRBP-245ENST00000621399 CCER2I3L3R5 266 aa24.52■■□□□ 1.52
CIRBP-245ENST00000621399 MIER1Q8N108 512 aa24.52■■□□□ 1.52
CIRBP-245ENST00000621399 BTAF1O14981 1849 aa24.51■■□□□ 1.51
CIRBP-245ENST00000621399 TMPOP42166 694 aaKnown RBP24.51■■□□□ 1.51
CIRBP-245ENST00000621399 RIPK4P57078 832 aa24.51■■□□□ 1.51
CIRBP-245ENST00000621399 MCM10Q7L590 875 aa24.51■■□□□ 1.51
CIRBP-245ENST00000621399 FAM9BQ8IZU0 186 aa24.51■■□□□ 1.51
CIRBP-245ENST00000621399 SMARCC1Q92922 1105 aaPredicted RBP24.51■■□□□ 1.51
CIRBP-245ENST00000621399 TEFQ10587 303 aa24.5■■□□□ 1.51
CIRBP-245ENST00000621399 TXNRD1Q16881 649 aa24.5■■□□□ 1.51
CIRBP-245ENST00000621399 ASAP1Q9ULH1 1129 aa24.5■■□□□ 1.51
CIRBP-245ENST00000621399 RRP7AQ9Y3A4 280 aaKnown RBP24.5■■□□□ 1.51
CIRBP-245ENST00000621399 DCTN1Q14203 1278 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms