RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 RGPD2P0DJD1 1756 aa22.15■■□□□ 1.14
SNHG28-203ENST00000621242 PRIM1P49642 420 aaKnown RBP22.14■■□□□ 1.13
SNHG28-203ENST00000621242 SHANK3Q9BYB0 1731 aa22.14■■□□□ 1.13
SNHG28-203ENST00000621242 A0A1W2PP64 1363 aa22.12■■□□□ 1.13
SNHG28-203ENST00000621242 ANKRD36BQ8N2N9 1353 aa22.12■■□□□ 1.13
SNHG28-203ENST00000621242 TERF2IPQ9NYB0 399 aa22.11■■□□□ 1.13
SNHG28-203ENST00000621242 CARD11Q9BXL7 1154 aa22.1■■□□□ 1.13
SNHG28-203ENST00000621242 NSD2O96028 1365 aa22.1■■□□□ 1.13
SNHG28-203ENST00000621242 YBX3P16989 372 aaKnown RBP eCLIP22.08■■□□□ 1.13
SNHG28-203ENST00000621242 CCNL1Q9UK58 526 aaPredicted RBP22.08■■□□□ 1.13
SNHG28-203ENST00000621242 MSH5O43196 834 aa22.07■■□□□ 1.12
SNHG28-203ENST00000621242 ZCRB1Q8TBF4 217 aaKnown RBP22.07■■□□□ 1.12
SNHG28-203ENST00000621242 GRIN3BO60391 1043 aa22.06■■□□□ 1.12
SNHG28-203ENST00000621242 FBLN1P23142 703 aa22.06■■□□□ 1.12
SNHG28-203ENST00000621242 HOXC9P31274 260 aa22.06■■□□□ 1.12
SNHG28-203ENST00000621242 COL23A1Q86Y22 540 aaPredicted RBP22.06■■□□□ 1.12
SNHG28-203ENST00000621242 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
SNHG28-203ENST00000621242 MEGF6O75095 1541 aa22.05■■□□□ 1.12
SNHG28-203ENST00000621242 AMPHP49418 695 aa22.04■■□□□ 1.12
SNHG28-203ENST00000621242 COG3Q96JB2 828 aa22.04■■□□□ 1.12
SNHG28-203ENST00000621242 IFFO2Q5TF58 517 aa22.03■■□□□ 1.12
SNHG28-203ENST00000621242 USP47Q96K76 1375 aa22.02■■□□□ 1.12
SNHG28-203ENST00000621242 MSL1Q68DK7 614 aa22.02■■□□□ 1.12
SNHG28-203ENST00000621242 PUS7Q96PZ0 661 aaKnown RBP22.02■■□□□ 1.12
SNHG28-203ENST00000621242 C5P01031 1676 aa22.01■■□□□ 1.11
SNHG28-203ENST00000621242 TAF1LQ8IZX4 1826 aa22.01■■□□□ 1.11
SNHG28-203ENST00000621242 ATP10DQ9P241 1426 aa21.99■■□□□ 1.11
SNHG28-203ENST00000621242 NBPF6Q5VWK0 638 aa21.99■■□□□ 1.11
SNHG28-203ENST00000621242 NBPF4Q96M43 638 aa21.99■■□□□ 1.11
SNHG28-203ENST00000621242 USHBP1Q8N6Y0 703 aa21.98■■□□□ 1.11
SNHG28-203ENST00000621242 RRS1Q15050 365 aaKnown RBP21.95■■□□□ 1.1
SNHG28-203ENST00000621242 CD2APQ9Y5K6 639 aa21.95■■□□□ 1.1
SNHG28-203ENST00000621242 RAPGEF4Q8WZA2 1011 aa21.94■■□□□ 1.1
SNHG28-203ENST00000621242 CGNL1Q0VF96 1302 aa21.94■■□□□ 1.1
SNHG28-203ENST00000621242 RTL1A6NKG5 1358 aa21.94■■□□□ 1.1
SNHG28-203ENST00000621242 ITGB4P16144 1822 aa21.93■■□□□ 1.1
SNHG28-203ENST00000621242 FLAD1Q8NFF5 587 aa21.93■■□□□ 1.1
SNHG28-203ENST00000621242 TESK2Q96S53 571 aa21.93■■□□□ 1.1
SNHG28-203ENST00000621242 GPBP1L1Q9HC44 474 aaPredicted RBP21.93■■□□□ 1.1
SNHG28-203ENST00000621242 TATP17735 454 aaPredicted RBP21.92■■□□□ 1.1
SNHG28-203ENST00000621242 PALLDQ8WX93 1383 aa21.91■■□□□ 1.1
SNHG28-203ENST00000621242 MPRIPQ6WCQ1 1025 aa21.91■■□□□ 1.1
SNHG28-203ENST00000621242 C4BP0C0L5 1744 aa21.9■■□□□ 1.1
SNHG28-203ENST00000621242 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
SNHG28-203ENST00000621242 ZNF526Q8TF50 670 aaPredicted RBP21.9■■□□□ 1.1
SNHG28-203ENST00000621242 GGNBP2Q9H3C7 697 aa21.9■■□□□ 1.1
SNHG28-203ENST00000621242 UBR3Q6ZT12 1888 aa21.9■■□□□ 1.1
SNHG28-203ENST00000621242 SMG6Q86US8 1419 aaKnown RBP21.89■■□□□ 1.1
SNHG28-203ENST00000621242 TOGARAM1Q9Y4F4 1720 aa21.89■■□□□ 1.1
SNHG28-203ENST00000621242 PCDH11XQ9BZA7 1347 aa21.89■■□□□ 1.1
SNHG28-203ENST00000621242 PCDH11YQ9BZA8 1340 aa21.89■■□□□ 1.1
SNHG28-203ENST00000621242 FYB1O15117 783 aa21.89■■□□□ 1.09
SNHG28-203ENST00000621242 ADCY9O60503 1353 aa21.88■■□□□ 1.09
SNHG28-203ENST00000621242 HMGB2P26583 209 aaKnown RBP21.88■■□□□ 1.09
SNHG28-203ENST00000621242 HSP90AB2PQ58FF8 381 aa21.88■■□□□ 1.09
SNHG28-203ENST00000621242 TONSLQ96HA7 1378 aa21.87■■□□□ 1.09
SNHG28-203ENST00000621242 AMIGO3Q86WK7 504 aa21.87■■□□□ 1.09
SNHG28-203ENST00000621242 WWC3Q9ULE0 1092 aa21.87■■□□□ 1.09
SNHG28-203ENST00000621242 CYP27B1O15528 508 aa21.86■■□□□ 1.09
SNHG28-203ENST00000621242 HSPA6P17066 643 aa21.86■■□□□ 1.09
SNHG28-203ENST00000621242 SMIM5Q71RC9 77 aa21.86■■□□□ 1.09
SNHG28-203ENST00000621242 AK7Q96M32 723 aa21.86■■□□□ 1.09
SNHG28-203ENST00000621242 IGSF1Q8N6C5 1336 aa21.85■■□□□ 1.09
SNHG28-203ENST00000621242 INSRP06213 1382 aa21.85■■□□□ 1.09
SNHG28-203ENST00000621242 PHF14O94880 888 aa21.84■■□□□ 1.09
SNHG28-203ENST00000621242 SMARCC1Q92922 1105 aaPredicted RBP21.84■■□□□ 1.09
SNHG28-203ENST00000621242 KIF20BQ96Q89 1820 aa21.84■■□□□ 1.09
SNHG28-203ENST00000621242 SLC24A1O60721 1099 aa21.83■■□□□ 1.09
SNHG28-203ENST00000621242 MAP2P11137 1827 aaKnown RBP21.83■■□□□ 1.08
SNHG28-203ENST00000621242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.82■■□□□ 1.08
SNHG28-203ENST00000621242 PKD1L3Q7Z443 1732 aa21.82■■□□□ 1.08
SNHG28-203ENST00000621242 PIGBQ92521 554 aa21.81■■□□□ 1.08
SNHG28-203ENST00000621242 FLT4P35916 1363 aa21.81■■□□□ 1.08
SNHG28-203ENST00000621242 NSD3Q9BZ95 1437 aa21.78■■□□□ 1.08
SNHG28-203ENST00000621242 KIF24Q5T7B8 1368 aa21.77■■□□□ 1.08
SNHG28-203ENST00000621242 SSFA2P28290 1259 aa21.77■■□□□ 1.08
SNHG28-203ENST00000621242 LINC00116Q8NCU8 138 aa21.77■■□□□ 1.08
SNHG28-203ENST00000621242 LOC102724428A0A0B4J2F2 783 aa21.76■■□□□ 1.07
SNHG28-203ENST00000621242 KIF3CO14782 793 aa21.76■■□□□ 1.07
SNHG28-203ENST00000621242 SIK1P57059 783 aa21.76■■□□□ 1.07
SNHG28-203ENST00000621242 TMF1P82094 1093 aa21.76■■□□□ 1.07
SNHG28-203ENST00000621242 NKX1-1Q15270 411 aaPredicted RBP21.76■■□□□ 1.07
SNHG28-203ENST00000621242 EMILIN1Q9Y6C2 1016 aa21.75■■□□□ 1.07
SNHG28-203ENST00000621242 N4BP2Q86UW6 1770 aaPredicted RBP21.74■■□□□ 1.07
SNHG28-203ENST00000621242 SPG7Q9UQ90 795 aa21.73■■□□□ 1.07
SNHG28-203ENST00000621242 KIF13BQ9NQT8 1826 aa21.73■■□□□ 1.07
SNHG28-203ENST00000621242 CICQ96RK0 1608 aaPredicted RBP21.73■■□□□ 1.07
SNHG28-203ENST00000621242 GNPATO15228 680 aa21.72■■□□□ 1.07
SNHG28-203ENST00000621242 ITPK1Q13572 414 aa21.72■■□□□ 1.07
SNHG28-203ENST00000621242 ASAP1Q9ULH1 1129 aa21.72■■□□□ 1.07
SNHG28-203ENST00000621242 KIAA1551Q9HCM1 1747 aa21.72■■□□□ 1.07
SNHG28-203ENST00000621242 NCAPD2Q15021 1401 aa21.72■■□□□ 1.07
SNHG28-203ENST00000621242 ATP6V1AP38606 617 aa21.71■■□□□ 1.07
SNHG28-203ENST00000621242 TMOD3Q9NYL9 352 aa21.71■■□□□ 1.07
SNHG28-203ENST00000621242 PPM1GO15355 546 aaPredicted RBP21.7■■□□□ 1.06
SNHG28-203ENST00000621242 MMP10P09238 476 aa21.7■■□□□ 1.06
SNHG28-203ENST00000621242 CARD14Q9BXL6 1004 aa21.69■■□□□ 1.06
SNHG28-203ENST00000621242 PXDNLA1KZ92 1463 aa21.69■■□□□ 1.06
SNHG28-203ENST00000621242 ANKRD26Q9UPS8 1709 aa21.69■■□□□ 1.06
SNHG28-203ENST00000621242 EYA1Q99502 592 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms