RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 TMF1P82094 1093 aa28.15■■■□□ 2.1
ITM2C-210ENST00000620962 SLC16A10Q8TF71 515 aa28.15■■■□□ 2.1
ITM2C-210ENST00000620962 CHD4Q14839 1912 aa28.15■■■□□ 2.1
ITM2C-210ENST00000620962 NSD2O96028 1365 aa28.14■■■□□ 2.1
ITM2C-210ENST00000620962 TUBGCP6Q96RT7 1819 aa28.14■■■□□ 2.1
ITM2C-210ENST00000620962 FYB1O15117 783 aa28.14■■■□□ 2.1
ITM2C-210ENST00000620962 PRIM1P49642 420 aaKnown RBP28.14■■■□□ 2.1
ITM2C-210ENST00000620962 CGNL1Q0VF96 1302 aa28.13■■■□□ 2.09
ITM2C-210ENST00000620962 USP47Q96K76 1375 aa28.12■■■□□ 2.09
ITM2C-210ENST00000620962 RRS1Q15050 365 aaKnown RBP28.12■■■□□ 2.09
ITM2C-210ENST00000620962 SYTL4Q96C24 671 aaPredicted RBP28.12■■■□□ 2.09
ITM2C-210ENST00000620962 KIF20BQ96Q89 1820 aa28.12■■■□□ 2.09
ITM2C-210ENST00000620962 SMG6Q86US8 1419 aaKnown RBP28.1■■■□□ 2.09
ITM2C-210ENST00000620962 NBPF6Q5VWK0 638 aa28.1■■■□□ 2.09
ITM2C-210ENST00000620962 NBPF4Q96M43 638 aa28.1■■■□□ 2.09
ITM2C-210ENST00000620962 GGNBP2Q9H3C7 697 aa28.1■■■□□ 2.09
ITM2C-210ENST00000620962 UTRNP46939 3433 aa28.1■■■□□ 2.09
ITM2C-210ENST00000620962 PNPLA7Q6ZV29 1317 aa28.1■■■□□ 2.09
ITM2C-210ENST00000620962 TFCP2L1Q9NZI6 479 aa28.07■■■□□ 2.08
ITM2C-210ENST00000620962 KIF24Q5T7B8 1368 aa28.07■■■□□ 2.08
ITM2C-210ENST00000620962 CDCA8Q53HL2 280 aa28.06■■■□□ 2.08
ITM2C-210ENST00000620962 INSRP06213 1382 aa28.06■■■□□ 2.08
ITM2C-210ENST00000620962 POLD1P28340 1107 aa28.05■■■□□ 2.08
ITM2C-210ENST00000620962 KCNQ4P56696 695 aa28.05■■■□□ 2.08
ITM2C-210ENST00000620962 ZNF784Q8NCA9 323 aaPredicted RBP28.05■■■□□ 2.08
ITM2C-210ENST00000620962 RAPGEF4Q8WZA2 1011 aa28.05■■■□□ 2.08
ITM2C-210ENST00000620962 FLT4P35916 1363 aa28.04■■■□□ 2.08
ITM2C-210ENST00000620962 USHBP1Q8N6Y0 703 aa28.03■■■□□ 2.08
ITM2C-210ENST00000620962 CCNL1Q9UK58 526 aaPredicted RBP28.03■■■□□ 2.08
ITM2C-210ENST00000620962 TATP17735 454 aaPredicted RBP28.01■■■□□ 2.07
ITM2C-210ENST00000620962 HSP90AB2PQ58FF8 381 aa28■■■□□ 2.07
ITM2C-210ENST00000620962 PCDH11XQ9BZA7 1347 aa27.99■■■□□ 2.07
ITM2C-210ENST00000620962 PCDH11YQ9BZA8 1340 aa27.99■■■□□ 2.07
ITM2C-210ENST00000620962 C5P01031 1676 aa27.98■■■□□ 2.07
ITM2C-210ENST00000620962 TRIM26Q12899 539 aaPredicted RBP27.98■■■□□ 2.07
ITM2C-210ENST00000620962 HMGB2P26583 209 aaKnown RBP27.97■■■□□ 2.07
ITM2C-210ENST00000620962 GPR162Q16538 588 aa27.96■■■□□ 2.07
ITM2C-210ENST00000620962 PKD1L3Q7Z443 1732 aa27.95■■■□□ 2.07
ITM2C-210ENST00000620962 ANKRD26Q9UPS8 1709 aa27.95■■■□□ 2.07
ITM2C-210ENST00000620962 TAF1LQ8IZX4 1826 aa27.95■■■□□ 2.07
ITM2C-210ENST00000620962 CARD14Q9BXL6 1004 aa27.95■■■□□ 2.06
ITM2C-210ENST00000620962 NCAPD2Q15021 1401 aa27.94■■■□□ 2.06
ITM2C-210ENST00000620962 KLHL34Q8N239 644 aa27.94■■■□□ 2.06
ITM2C-210ENST00000620962 NSD3Q9BZ95 1437 aa27.93■■■□□ 2.06
ITM2C-210ENST00000620962 ITGB4P16144 1822 aa27.93■■■□□ 2.06
ITM2C-210ENST00000620962 TOGARAM1Q9Y4F4 1720 aa27.92■■■□□ 2.06
ITM2C-210ENST00000620962 COL23A1Q86Y22 540 aaPredicted RBP27.92■■■□□ 2.06
ITM2C-210ENST00000620962 PALLDQ8WX93 1383 aa27.91■■■□□ 2.06
ITM2C-210ENST00000620962 CYP27B1O15528 508 aa27.91■■■□□ 2.06
ITM2C-210ENST00000620962 EMILIN1Q9Y6C2 1016 aa27.91■■■□□ 2.06
ITM2C-210ENST00000620962 TIMELESSQ9UNS1 1208 aa27.9■■■□□ 2.06
ITM2C-210ENST00000620962 NLGN2Q8NFZ4 835 aa27.89■■■□□ 2.06
ITM2C-210ENST00000620962 MSH5O43196 834 aa27.88■■■□□ 2.05
ITM2C-210ENST00000620962 MAP2P11137 1827 aaKnown RBP27.88■■■□□ 2.05
ITM2C-210ENST00000620962 MPRIPQ6WCQ1 1025 aa27.87■■■□□ 2.05
ITM2C-210ENST00000620962 FLAD1Q8NFF5 587 aa27.87■■■□□ 2.05
ITM2C-210ENST00000620962 SMARCC1Q92922 1105 aaPredicted RBP27.86■■■□□ 2.05
ITM2C-210ENST00000620962 C4BP0C0L5 1744 aa27.85■■■□□ 2.05
ITM2C-210ENST00000620962 NKX1-1Q15270 411 aaPredicted RBP27.85■■■□□ 2.05
ITM2C-210ENST00000620962 WASHC2AQ641Q2 1341 aa27.85■■■□□ 2.05
ITM2C-210ENST00000620962 PELP1Q8IZL8 1130 aaKnown RBP27.84■■■□□ 2.05
ITM2C-210ENST00000620962 SPG7Q9UQ90 795 aa27.82■■■□□ 2.04
ITM2C-210ENST00000620962 UBR3Q6ZT12 1888 aa27.82■■■□□ 2.04
ITM2C-210ENST00000620962 PPM1GO15355 546 aaPredicted RBP27.81■■■□□ 2.04
ITM2C-210ENST00000620962 MSL1Q68DK7 614 aa27.81■■■□□ 2.04
ITM2C-210ENST00000620962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.81■■■□□ 2.04
ITM2C-210ENST00000620962 GRIN3BO60391 1043 aa27.8■■■□□ 2.04
ITM2C-210ENST00000620962 C1QTNF8P60827 252 aa27.8■■■□□ 2.04
ITM2C-210ENST00000620962 PIGBQ92521 554 aa27.8■■■□□ 2.04
ITM2C-210ENST00000620962 GOLGB1Q14789 3259 aaKnown RBP27.8■■■□□ 2.04
ITM2C-210ENST00000620962 CLSPNQ9HAW4 1339 aa27.79■■■□□ 2.04
ITM2C-210ENST00000620962 EYA1Q99502 592 aa27.79■■■□□ 2.04
ITM2C-210ENST00000620962 CD2APQ9Y5K6 639 aa27.79■■■□□ 2.04
ITM2C-210ENST00000620962 YBX3P16989 372 aaKnown RBP eCLIP27.78■■■□□ 2.042e-7■■□□□ 12.9
ITM2C-210ENST00000620962 AK7Q96M32 723 aa27.77■■■□□ 2.04
ITM2C-210ENST00000620962 POLKQ9UBT6 870 aa27.77■■■□□ 2.04
ITM2C-210ENST00000620962 PLEKHG2Q9H7P9 1386 aa27.76■■■□□ 2.03
ITM2C-210ENST00000620962 LOC102724428A0A0B4J2F2 783 aa27.73■■■□□ 2.03
ITM2C-210ENST00000620962 SIK1P57059 783 aa27.73■■■□□ 2.03
ITM2C-210ENST00000620962 AMIGO3Q86WK7 504 aa27.73■■■□□ 2.03
ITM2C-210ENST00000620962 IFNL2Q8IZJ0 200 aa27.72■■■□□ 2.03
ITM2C-210ENST00000620962 TMOD3Q9NYL9 352 aa27.72■■■□□ 2.03
ITM2C-210ENST00000620962 PHKG2P15735 406 aa27.71■■■□□ 2.03
ITM2C-210ENST00000620962 SSFA2P28290 1259 aa27.71■■■□□ 2.03
ITM2C-210ENST00000620962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.7■■■□□ 2.02
ITM2C-210ENST00000620962 GIGYF1O75420 1035 aaPredicted RBP27.7■■■□□ 2.02
ITM2C-210ENST00000620962 LINC00116Q8NCU8 138 aa27.7■■■□□ 2.02
ITM2C-210ENST00000620962 SENP3-EIF4A1A0A087X0R7 540 aa27.69■■■□□ 2.02
ITM2C-210ENST00000620962 EIF4A2Q14240 407 aaKnown RBP27.69■■■□□ 2.02
ITM2C-210ENST00000620962 PHF14O94880 888 aa27.68■■■□□ 2.02
ITM2C-210ENST00000620962 ASAP1Q9ULH1 1129 aa27.67■■■□□ 2.02
ITM2C-210ENST00000620962 POLR3GLQ9BT43 218 aa27.65■■■□□ 2.02
ITM2C-210ENST00000620962 ZNF831Q5JPB2 1677 aa27.65■■■□□ 2.02
ITM2C-210ENST00000620962 IGSF1Q8N6C5 1336 aa27.65■■■□□ 2.02
ITM2C-210ENST00000620962 TNNT2P45379 298 aaPredicted RBP27.64■■■□□ 2.02
ITM2C-210ENST00000620962 ITPK1Q13572 414 aa27.64■■■□□ 2.02
ITM2C-210ENST00000620962 SMIM5Q71RC9 77 aa27.64■■■□□ 2.02
ITM2C-210ENST00000620962 ATP6V1AP38606 617 aa27.63■■■□□ 2.01
ITM2C-210ENST00000620962 ATG3Q9NT62 314 aa27.63■■■□□ 2.01
ITM2C-210ENST00000620962 KDRP35968 1356 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms