RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 ZBTB7BO15156 539 aaPredicted RBP11.48□□□□□ -0.57
LPCAT3-213ENST00000620843 SCTRP47872 440 aa11.48□□□□□ -0.57
LPCAT3-213ENST00000620843 PSME1Q06323 249 aa11.48□□□□□ -0.57
LPCAT3-213ENST00000620843 BRD1O95696 1058 aa11.47□□□□□ -0.57
LPCAT3-213ENST00000620843 ADH1CP00326 375 aa11.47□□□□□ -0.57
LPCAT3-213ENST00000620843 MYCP01106 439 aaPredicted RBP11.47□□□□□ -0.57
LPCAT3-213ENST00000620843 ZNF697Q5TEC3 545 aa11.47□□□□□ -0.57
LPCAT3-213ENST00000620843 PCDHGA11Q9Y5H2 935 aa11.47□□□□□ -0.57
LPCAT3-213ENST00000620843 SIX5Q8N196 739 aa11.46□□□□□ -0.57
LPCAT3-213ENST00000620843 TPCN2Q8NHX9 752 aa11.46□□□□□ -0.57
LPCAT3-213ENST00000620843 TMPRSS4Q9NRS4 437 aa11.46□□□□□ -0.57
LPCAT3-213ENST00000620843 DKK1O94907 266 aa11.45□□□□□ -0.58
LPCAT3-213ENST00000620843 DHX9Q08211 1270 aaKnown RBP11.45□□□□□ -0.58
LPCAT3-213ENST00000620843 CCDC102BQ68D86 513 aa11.45□□□□□ -0.58
LPCAT3-213ENST00000620843 ZNF598Q86UK7 904 aaKnown RBP11.45□□□□□ -0.58
LPCAT3-213ENST00000620843 CYLDQ9NQC7 956 aa11.45□□□□□ -0.58
LPCAT3-213ENST00000620843 ERVK-9P63128 1117 aa11.44□□□□□ -0.58
LPCAT3-213ENST00000620843 FAM69CQ0P6D2 419 aa11.44□□□□□ -0.58
LPCAT3-213ENST00000620843 FOXC1Q12948 553 aa11.44□□□□□ -0.58
LPCAT3-213ENST00000620843 NR5A1Q13285 461 aa11.44□□□□□ -0.58
LPCAT3-213ENST00000620843 CC2D2BQ6DHV5 1058 aa11.44□□□□□ -0.58
LPCAT3-213ENST00000620843 CCDC116Q8IYX3 515 aa11.44□□□□□ -0.58
LPCAT3-213ENST00000620843 PRKD2Q9BZL6 878 aa11.44□□□□□ -0.58
LPCAT3-213ENST00000620843 ESF1Q9H501 851 aaKnown RBP11.44□□□□□ -0.58
LPCAT3-213ENST00000620843 RBM19Q9Y4C8 960 aaKnown RBP11.44□□□□□ -0.58
LPCAT3-213ENST00000620843 ZNF784Q8NCA9 323 aaPredicted RBP11.43□□□□□ -0.58
LPCAT3-213ENST00000620843 NR3C2P08235 984 aa11.42□□□□□ -0.58
LPCAT3-213ENST00000620843 SEC13P55735 322 aa11.42□□□□□ -0.58
LPCAT3-213ENST00000620843 KCNA1Q09470 495 aa11.42□□□□□ -0.58
LPCAT3-213ENST00000620843 PPP1R26Q5T8A7 1209 aaPredicted RBP11.42□□□□□ -0.58
LPCAT3-213ENST00000620843 PKD2L1Q9P0L9 805 aa11.42□□□□□ -0.58
LPCAT3-213ENST00000620843 SFI1A8K8P3 1242 aa11.41□□□□□ -0.58
LPCAT3-213ENST00000620843 ALDH1A1P00352 501 aa11.41□□□□□ -0.58
LPCAT3-213ENST00000620843 SLAIN2Q9P270 581 aa11.41□□□□□ -0.58
LPCAT3-213ENST00000620843 V9GY48 417 aaPredicted RBP11.41□□□□□ -0.58
LPCAT3-213ENST00000620843 SWI5Q1ZZU3 235 aa11.4□□□□□ -0.58
LPCAT3-213ENST00000620843 B4GALNT3Q6L9W6 998 aa11.4□□□□□ -0.58
LPCAT3-213ENST00000620843 CLP1Q92989 425 aaKnown RBP11.4□□□□□ -0.58
LPCAT3-213ENST00000620843 TRIM52Q96A61 297 aa11.4□□□□□ -0.58
LPCAT3-213ENST00000620843 OSBPL3Q9H4L5 887 aa11.4□□□□□ -0.58
LPCAT3-213ENST00000620843 PATL2C9JE40 543 aaKnown RBP11.39□□□□□ -0.59
LPCAT3-213ENST00000620843 MYT1Q01538 1121 aa11.39□□□□□ -0.59
LPCAT3-213ENST00000620843 LILRA1O75019 489 aa11.38□□□□□ -0.59
LPCAT3-213ENST00000620843 WASF2Q9Y6W5 498 aa11.38□□□□□ -0.59
LPCAT3-213ENST00000620843 NNTQ13423 1086 aa11.37□□□□□ -0.59
LPCAT3-213ENST00000620843 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
LPCAT3-213ENST00000620843 EMILIN1Q9Y6C2 1016 aa11.37□□□□□ -0.59
LPCAT3-213ENST00000620843 SSFA2P28290 1259 aa11.36□□□□□ -0.59
LPCAT3-213ENST00000620843 PHLDB3Q6NSJ2 640 aa11.36□□□□□ -0.59
LPCAT3-213ENST00000620843 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.36□□□□□ -0.59
LPCAT3-213ENST00000620843 SNIP1Q8TAD8 396 aaKnown RBP11.36□□□□□ -0.59
LPCAT3-213ENST00000620843 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
LPCAT3-213ENST00000620843 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
LPCAT3-213ENST00000620843 GZF1Q9H116 711 aaPredicted RBP11.35□□□□□ -0.59
LPCAT3-213ENST00000620843 ZNF358Q9NW07 568 aa11.35□□□□□ -0.59
LPCAT3-213ENST00000620843 IVNS1ABPQ9Y6Y0 642 aa11.35□□□□□ -0.59
LPCAT3-213ENST00000620843 TTC24A2A3L6 582 aaPredicted RBP11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 TMEM229AB2RXF0 380 aa11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 GDF9O60383 454 aa11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 PRMT3O60678 531 aa11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 LGR5O75473 907 aa11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 ADD1P35611 737 aaKnown RBP11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 SCNN1DP51172 638 aa11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 CYP2U1Q7Z449 544 aa11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 TSEN2Q8NCE0 465 aaKnown RBP11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 HINFPQ9BQA5 517 aa11.34□□□□□ -0.59
LPCAT3-213ENST00000620843 J3QL48 77 aa11.33□□□□□ -0.6
LPCAT3-213ENST00000620843 TNFRSF10AO00220 468 aa11.33□□□□□ -0.6
LPCAT3-213ENST00000620843 GDF10P55107 478 aa11.33□□□□□ -0.6
LPCAT3-213ENST00000620843 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
LPCAT3-213ENST00000620843 CYP4X1Q8N118 509 aa11.32□□□□□ -0.6
LPCAT3-213ENST00000620843 M0R2N6 131 aa11.31□□□□□ -0.6
LPCAT3-213ENST00000620843 ETNK1Q9HBU6 452 aa11.31□□□□□ -0.6
LPCAT3-213ENST00000620843 OCLNQ16625 522 aa11.3□□□□□ -0.6
LPCAT3-213ENST00000620843 WASLO00401 505 aaPredicted RBP11.29□□□□□ -0.6
LPCAT3-213ENST00000620843 GNRH1P01148 92 aa11.29□□□□□ -0.6
LPCAT3-213ENST00000620843 INHAP05111 366 aa11.29□□□□□ -0.6
LPCAT3-213ENST00000620843 CBLBQ13191 982 aa11.29□□□□□ -0.6
LPCAT3-213ENST00000620843 ITPKCQ96DU7 683 aa11.29□□□□□ -0.6
LPCAT3-213ENST00000620843 RAB6BQ9NRW1 208 aa11.29□□□□□ -0.6
LPCAT3-213ENST00000620843 TOR4AQ9NXH8 423 aa11.29□□□□□ -0.6
LPCAT3-213ENST00000620843 CXXC1Q9P0U4 656 aaPredicted RBP11.29□□□□□ -0.6
LPCAT3-213ENST00000620843 SERTAD1Q9UHV2 236 aa11.29□□□□□ -0.6
LPCAT3-213ENST00000620843 BACH1O14867 736 aa11.28□□□□□ -0.6
LPCAT3-213ENST00000620843 ZIC2O95409 532 aaPredicted RBP11.28□□□□□ -0.6
LPCAT3-213ENST00000620843 ADH1AP07327 375 aa11.28□□□□□ -0.6
LPCAT3-213ENST00000620843 WDR4P57081 412 aaKnown RBP11.28□□□□□ -0.6
LPCAT3-213ENST00000620843 TRIM67Q6ZTA4 783 aa11.28□□□□□ -0.6
LPCAT3-213ENST00000620843 TXNDC2Q86VQ3 553 aa11.28□□□□□ -0.6
LPCAT3-213ENST00000620843 ARHGEF10LQ9HCE6 1279 aa11.28□□□□□ -0.6
LPCAT3-213ENST00000620843 GNEQ9Y223 722 aaKnown RBP11.28□□□□□ -0.6
LPCAT3-213ENST00000620843 NISCHQ9Y2I1 1504 aa11.28□□□□□ -0.6
LPCAT3-213ENST00000620843 ARID4AP29374 1257 aaPredicted RBP11.27□□□□□ -0.61
LPCAT3-213ENST00000620843 SCNN1AP37088 669 aa11.27□□□□□ -0.61
LPCAT3-213ENST00000620843 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
LPCAT3-213ENST00000620843 TNS4Q8IZW8 715 aa11.27□□□□□ -0.61
LPCAT3-213ENST00000620843 CCER1Q8TC90 406 aaPredicted RBP11.27□□□□□ -0.61
LPCAT3-213ENST00000620843 KLF16Q9BXK1 252 aaPredicted RBP11.27□□□□□ -0.61
LPCAT3-213ENST00000620843 ZFAND3Q9H8U3 227 aa11.27□□□□□ -0.61
LPCAT3-213ENST00000620843 CCDC9Q9Y3X0 531 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms