RNA–Protein interactions for RNA: ENST00000620424.1

SYNRG-228, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-228ENST00000620424 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.34
SYNRG-228ENST00000620424 APBA3O96018 575 aa12.95□□□□□ -0.34
SYNRG-228ENST00000620424 BAG6P46379 1132 aa12.95□□□□□ -0.34
SYNRG-228ENST00000620424 EIF4A2Q14240 407 aaKnown RBP12.95□□□□□ -0.34
SYNRG-228ENST00000620424 SBF2Q86WG5 1849 aa12.95□□□□□ -0.34
SYNRG-228ENST00000620424 SHANK3Q9BYB0 1731 aa12.94□□□□□ -0.34
SYNRG-228ENST00000620424 KCNQ2O43526 872 aa12.94□□□□□ -0.34
SYNRG-228ENST00000620424 DDX54Q8TDD1 881 aaKnown RBP12.94□□□□□ -0.34
SYNRG-228ENST00000620424 ACSBG1Q96GR2 724 aa12.94□□□□□ -0.34
SYNRG-228ENST00000620424 CAMKK2Q96RR4 588 aa12.94□□□□□ -0.34
SYNRG-228ENST00000620424 EYA1Q99502 592 aa12.94□□□□□ -0.34
SYNRG-228ENST00000620424 BCL9O00512 1426 aa12.93□□□□□ -0.34
SYNRG-228ENST00000620424 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
SYNRG-228ENST00000620424 ZCRB1Q8TBF4 217 aaKnown RBP12.92□□□□□ -0.34
SYNRG-228ENST00000620424 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
SYNRG-228ENST00000620424 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
SYNRG-228ENST00000620424 TATP17735 454 aaPredicted RBP12.9□□□□□ -0.34
SYNRG-228ENST00000620424 MTHFSP49914 203 aa12.9□□□□□ -0.34
SYNRG-228ENST00000620424 NPC1L1Q9UHC9 1359 aa12.9□□□□□ -0.34
SYNRG-228ENST00000620424 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
SYNRG-228ENST00000620424 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
SYNRG-228ENST00000620424 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
SYNRG-228ENST00000620424 PSDA5PKW4 1024 aaPredicted RBP12.88□□□□□ -0.35
SYNRG-228ENST00000620424 CYP27B1O15528 508 aa12.88□□□□□ -0.35
SYNRG-228ENST00000620424 IL13P35225 146 aa12.88□□□□□ -0.35
SYNRG-228ENST00000620424 PROM2Q8N271 834 aa12.88□□□□□ -0.35
SYNRG-228ENST00000620424 RREB1Q92766 1687 aa12.88□□□□□ -0.35
SYNRG-228ENST00000620424 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
SYNRG-228ENST00000620424 PKD1L3Q7Z443 1732 aa12.87□□□□□ -0.35
SYNRG-228ENST00000620424 DOT1LQ8TEK3 1739 aa12.86□□□□□ -0.35
SYNRG-228ENST00000620424 PRIM1P49642 420 aaKnown RBP12.86□□□□□ -0.35
SYNRG-228ENST00000620424 BTAF1O14981 1849 aa12.85□□□□□ -0.35
SYNRG-228ENST00000620424 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
SYNRG-228ENST00000620424 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
SYNRG-228ENST00000620424 PLSCR1O15162 318 aa12.85□□□□□ -0.35
SYNRG-228ENST00000620424 R3HDM1Q15032 1099 aaKnown RBP12.85□□□□□ -0.35
SYNRG-228ENST00000620424 SYTL4Q96C24 671 aaPredicted RBP12.85□□□□□ -0.35
SYNRG-228ENST00000620424 PCDH11XQ9BZA7 1347 aa12.85□□□□□ -0.35
SYNRG-228ENST00000620424 PCDH11YQ9BZA8 1340 aa12.85□□□□□ -0.35
SYNRG-228ENST00000620424 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
SYNRG-228ENST00000620424 TOGARAM1Q9Y4F4 1720 aa12.84□□□□□ -0.35
SYNRG-228ENST00000620424 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
SYNRG-228ENST00000620424 DDX10Q13206 875 aaKnown RBP12.83□□□□□ -0.36
SYNRG-228ENST00000620424 TXNRD1Q16881 649 aa12.83□□□□□ -0.36
SYNRG-228ENST00000620424 SULT6B1Q6IMI4 303 aa12.83□□□□□ -0.36
SYNRG-228ENST00000620424 SPG7Q9UQ90 795 aa12.83□□□□□ -0.36
SYNRG-228ENST00000620424 RGPD3A6NKT7 1758 aaPredicted RBP12.83□□□□□ -0.36
SYNRG-228ENST00000620424 RGPD4Q7Z3J3 1758 aa12.83□□□□□ -0.36
SYNRG-228ENST00000620424 HMOX1P09601 288 aa12.82□□□□□ -0.36
SYNRG-228ENST00000620424 KCNQ4P56696 695 aa12.82□□□□□ -0.36
SYNRG-228ENST00000620424 KAT6BQ8WYB5 2073 aa12.82□□□□□ -0.36
SYNRG-228ENST00000620424 KDRP35968 1356 aa12.81□□□□□ -0.36
SYNRG-228ENST00000620424 DIAPH1O60610 1272 aaKnown RBP12.81□□□□□ -0.36
SYNRG-228ENST00000620424 PHKG2P15735 406 aa12.81□□□□□ -0.36
SYNRG-228ENST00000620424 LRRC4BQ9NT99 713 aa12.81□□□□□ -0.36
SYNRG-228ENST00000620424 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
SYNRG-228ENST00000620424 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
SYNRG-228ENST00000620424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.367e-15■■□□□ 14
SYNRG-228ENST00000620424 ZNF530Q6P9A1 599 aaPredicted RBP12.79□□□□□ -0.36
SYNRG-228ENST00000620424 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
SYNRG-228ENST00000620424 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
SYNRG-228ENST00000620424 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
SYNRG-228ENST00000620424 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
SYNRG-228ENST00000620424 PDGFDQ9GZP0 370 aaPredicted RBP12.78□□□□□ -0.36
SYNRG-228ENST00000620424 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
SYNRG-228ENST00000620424 PAPPAQ13219 1627 aa12.77□□□□□ -0.36
SYNRG-228ENST00000620424 ITGB4P16144 1822 aa12.77□□□□□ -0.37
SYNRG-228ENST00000620424 ZNF827Q17R98 1081 aa12.77□□□□□ -0.37
SYNRG-228ENST00000620424 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
SYNRG-228ENST00000620424 PIGBQ92521 554 aa12.77□□□□□ -0.37
SYNRG-228ENST00000620424 RNF39Q9H2S5 420 aa12.76□□□□□ -0.37
SYNRG-228ENST00000620424 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
SYNRG-228ENST00000620424 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
SYNRG-228ENST00000620424 LY75O60449 1722 aa12.74□□□□□ -0.37
SYNRG-228ENST00000620424 PALLDQ8WX93 1383 aa12.74□□□□□ -0.37
SYNRG-228ENST00000620424 SLC15A2Q16348 729 aa12.74□□□□□ -0.37
SYNRG-228ENST00000620424 MTHFSDQ2M296 383 aaKnown RBP12.74□□□□□ -0.37
SYNRG-228ENST00000620424 CFAP53Q96M91 514 aa12.74□□□□□ -0.37
SYNRG-228ENST00000620424 STK32BQ9NY57 414 aa12.74□□□□□ -0.37
SYNRG-228ENST00000620424 CCNL1Q9UK58 526 aaPredicted RBP12.74□□□□□ -0.37
SYNRG-228ENST00000620424 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
SYNRG-228ENST00000620424 AKT1S1Q96B36 256 aa12.73□□□□□ -0.37
SYNRG-228ENST00000620424 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
SYNRG-228ENST00000620424 LGR6Q9HBX8 967 aa12.73□□□□□ -0.37
SYNRG-228ENST00000620424 TMOD3Q9NYL9 352 aa12.73□□□□□ -0.37
SYNRG-228ENST00000620424 CASZ1Q86V15 1759 aa12.72□□□□□ -0.37
SYNRG-228ENST00000620424 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
SYNRG-228ENST00000620424 PHACTR3Q96KR7 559 aa12.72□□□□□ -0.37
SYNRG-228ENST00000620424 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
SYNRG-228ENST00000620424 LRP5O75197 1615 aa12.71□□□□□ -0.37
SYNRG-228ENST00000620424 U2AF1L5P0DN76 240 aaPredicted RBP12.71□□□□□ -0.37
SYNRG-228ENST00000620424 PRKAR2BP31323 418 aa12.71□□□□□ -0.37
SYNRG-228ENST00000620424 U2AF1Q01081 240 aaKnown RBP eCLIP12.71□□□□□ -0.37
SYNRG-228ENST00000620424 SLC27A3Q5K4L6 730 aa12.71□□□□□ -0.37
SYNRG-228ENST00000620424 ATG3Q9NT62 314 aa12.71□□□□□ -0.37
SYNRG-228ENST00000620424 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
SYNRG-228ENST00000620424 ZBTB7AO95365 584 aa12.7□□□□□ -0.38
SYNRG-228ENST00000620424 HSP90AB1P08238 724 aaKnown RBP12.7□□□□□ -0.38
SYNRG-228ENST00000620424 CABP4P57796 275 aa12.7□□□□□ -0.38
SYNRG-228ENST00000620424 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms