RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 LRRC37A3O60309 1634 aa17.32■□□□□ 0.36
SRSF3-206ENST00000620242 ANP32CO43423 234 aa17.31■□□□□ 0.36
SRSF3-206ENST00000620242 USHBP1Q8N6Y0 703 aa17.31■□□□□ 0.36
SRSF3-206ENST00000620242 UPF1Q92900 1129 aaKnown RBP eCLIP17.31■□□□□ 0.36
SRSF3-206ENST00000620242 PNNQ9H307 717 aaKnown RBP17.31■□□□□ 0.36
SRSF3-206ENST00000620242 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
SRSF3-206ENST00000620242 KDRP35968 1356 aa17.3■□□□□ 0.36
SRSF3-206ENST00000620242 PLEKHO1Q53GL0 409 aaPredicted RBP17.3■□□□□ 0.36
SRSF3-206ENST00000620242 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
SRSF3-206ENST00000620242 NEFMP07197 916 aa17.29■□□□□ 0.36
SRSF3-206ENST00000620242 SULT6B1Q6IMI4 303 aa17.29■□□□□ 0.36
SRSF3-206ENST00000620242 MEGF6O75095 1541 aa17.28■□□□□ 0.36
SRSF3-206ENST00000620242 HSP90AB1P08238 724 aaKnown RBP17.28■□□□□ 0.36
SRSF3-206ENST00000620242 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
SRSF3-206ENST00000620242 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
SRSF3-206ENST00000620242 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
SRSF3-206ENST00000620242 HMGB2P26583 209 aaKnown RBP17.27■□□□□ 0.36
SRSF3-206ENST00000620242 BAG6P46379 1132 aa17.27■□□□□ 0.36
SRSF3-206ENST00000620242 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
SRSF3-206ENST00000620242 IFNL2Q8IZJ0 200 aa17.26■□□□□ 0.35
SRSF3-206ENST00000620242 FCHSD2O94868 740 aa17.25■□□□□ 0.35
SRSF3-206ENST00000620242 BCL11BQ9C0K0 894 aaPredicted RBP17.25■□□□□ 0.35
SRSF3-206ENST00000620242 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
SRSF3-206ENST00000620242 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
SRSF3-206ENST00000620242 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
SRSF3-206ENST00000620242 RGPD1P0DJD0 1748 aa17.24■□□□□ 0.35
SRSF3-206ENST00000620242 TRIM37O94972 964 aa17.23■□□□□ 0.35
SRSF3-206ENST00000620242 HMOX1P09601 288 aa17.22■□□□□ 0.35
SRSF3-206ENST00000620242 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
SRSF3-206ENST00000620242 FAM182BQ5T319 152 aa17.22■□□□□ 0.35
SRSF3-206ENST00000620242 GAS2L2Q8NHY3 880 aa17.22■□□□□ 0.35
SRSF3-206ENST00000620242 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
SRSF3-206ENST00000620242 PHKG2P15735 406 aa17.2■□□□□ 0.34
SRSF3-206ENST00000620242 WDR43Q15061 677 aaKnown RBP eCLIP17.2■□□□□ 0.34
SRSF3-206ENST00000620242 ZNF530Q6P9A1 599 aaPredicted RBP17.2■□□□□ 0.34
SRSF3-206ENST00000620242 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
SRSF3-206ENST00000620242 DCAF5Q96JK2 942 aa17.2■□□□□ 0.34
SRSF3-206ENST00000620242 CYP27B1O15528 508 aa17.19■□□□□ 0.34
SRSF3-206ENST00000620242 APBA3O96018 575 aa17.19■□□□□ 0.34
SRSF3-206ENST00000620242 AKAP4Q5JQC9 854 aa17.19■□□□□ 0.34
SRSF3-206ENST00000620242 EP400Q96L91 3159 aa17.18■□□□□ 0.34
SRSF3-206ENST00000620242 PLSCR1O15162 318 aa17.18■□□□□ 0.34
SRSF3-206ENST00000620242 ERVV-2B6SEH9 535 aa17.17■□□□□ 0.34
SRSF3-206ENST00000620242 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
SRSF3-206ENST00000620242 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
SRSF3-206ENST00000620242 SYTL4Q96C24 671 aaPredicted RBP17.16■□□□□ 0.34
SRSF3-206ENST00000620242 MAPK8IP3Q9UPT6 1336 aa17.16■□□□□ 0.34
SRSF3-206ENST00000620242 PRIM1P49642 420 aaKnown RBP17.15■□□□□ 0.34
SRSF3-206ENST00000620242 ACSBG1Q96GR2 724 aa17.15■□□□□ 0.34
SRSF3-206ENST00000620242 NHSQ6T4R5 1651 aa17.14■□□□□ 0.33
SRSF3-206ENST00000620242 SHANK3Q9BYB0 1731 aa17.14■□□□□ 0.33
SRSF3-206ENST00000620242 SMARCC1Q92922 1105 aaPredicted RBP17.14■□□□□ 0.33
SRSF3-206ENST00000620242 TMOD3Q9NYL9 352 aa17.14■□□□□ 0.33
SRSF3-206ENST00000620242 SBF2Q86WG5 1849 aa17.14■□□□□ 0.33
SRSF3-206ENST00000620242 KAT6BQ8WYB5 2073 aa17.13■□□□□ 0.33
SRSF3-206ENST00000620242 HTATSF1O43719 755 aaKnown RBP17.13■□□□□ 0.33
SRSF3-206ENST00000620242 GNAT3A8MTJ3 354 aa17.12■□□□□ 0.33
SRSF3-206ENST00000620242 MTHFSDQ2M296 383 aaKnown RBP17.12■□□□□ 0.33
SRSF3-206ENST00000620242 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
SRSF3-206ENST00000620242 KCNQ2O43526 872 aa17.11■□□□□ 0.33
SRSF3-206ENST00000620242 CABP4P57796 275 aa17.11■□□□□ 0.33
SRSF3-206ENST00000620242 SLC27A3Q5K4L6 730 aa17.11■□□□□ 0.33
SRSF3-206ENST00000620242 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
SRSF3-206ENST00000620242 RGPD3A6NKT7 1758 aaPredicted RBP17.1■□□□□ 0.33
SRSF3-206ENST00000620242 RGPD4Q7Z3J3 1758 aa17.1■□□□□ 0.33
SRSF3-206ENST00000620242 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
SRSF3-206ENST00000620242 NBPF14Q5TI25 921 aa17.1■□□□□ 0.33
SRSF3-206ENST00000620242 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
SRSF3-206ENST00000620242 CAMKK2Q96RR4 588 aa17.1■□□□□ 0.33
SRSF3-206ENST00000620242 MRS2Q9HD23 443 aa17.1■□□□□ 0.33
SRSF3-206ENST00000620242 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
SRSF3-206ENST00000620242 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
SRSF3-206ENST00000620242 DEFB132Q7Z7B7 95 aa17.09■□□□□ 0.33
SRSF3-206ENST00000620242 DOT1LQ8TEK3 1739 aa17.08■□□□□ 0.32
SRSF3-206ENST00000620242 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
SRSF3-206ENST00000620242 TEFQ10587 303 aa17.07■□□□□ 0.32
SRSF3-206ENST00000620242 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
SRSF3-206ENST00000620242 PLEKHF1Q96S99 279 aa17.07■□□□□ 0.32
SRSF3-206ENST00000620242 EZH2Q15910 746 aaKnown RBP17.06■□□□□ 0.32
SRSF3-206ENST00000620242 NFE2L2Q16236 605 aa17.06■□□□□ 0.32
SRSF3-206ENST00000620242 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
SRSF3-206ENST00000620242 PIGBQ92521 554 aa17.06■□□□□ 0.32
SRSF3-206ENST00000620242 PHACTR3Q96KR7 559 aa17.06■□□□□ 0.32
SRSF3-206ENST00000620242 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
SRSF3-206ENST00000620242 TXNRD1Q16881 649 aa17.05■□□□□ 0.32
SRSF3-206ENST00000620242 ADAMTS8Q9UP79 889 aa17.05■□□□□ 0.32
SRSF3-206ENST00000620242 BTAF1O14981 1849 aa17.05■□□□□ 0.32
SRSF3-206ENST00000620242 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
SRSF3-206ENST00000620242 PALLDQ8WX93 1383 aa17.03■□□□□ 0.32
SRSF3-206ENST00000620242 CCER2I3L3R5 266 aa17.03■□□□□ 0.32
SRSF3-206ENST00000620242 NFATC2IPQ8NCF5 419 aa17.03■□□□□ 0.32
SRSF3-206ENST00000620242 PTF1AQ7RTS3 328 aa17.02■□□□□ 0.32
SRSF3-206ENST00000620242 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.32
SRSF3-206ENST00000620242 CEMIPQ8WUJ3 1361 aa17.02■□□□□ 0.31
SRSF3-206ENST00000620242 TTC5Q8N0Z6 440 aa17.01■□□□□ 0.31
SRSF3-206ENST00000620242 CCNL1Q9UK58 526 aaPredicted RBP17.01■□□□□ 0.31
SRSF3-206ENST00000620242 SCN11AQ9UI33 1791 aa17.01■□□□□ 0.31
SRSF3-206ENST00000620242 ITGB4P16144 1822 aa17■□□□□ 0.31
SRSF3-206ENST00000620242 MRC1P22897 1456 aa17■□□□□ 0.31
SRSF3-206ENST00000620242 RIPK4P57078 832 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms