RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 CRYBG1Q9Y4K1 1723 aa16.25■□□□□ 0.19
SKP2-209ENST00000620197 RTL1A6NKG5 1358 aa16.25■□□□□ 0.19
SKP2-209ENST00000620197 METP08581 1390 aa16.25■□□□□ 0.19
SKP2-209ENST00000620197 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
SKP2-209ENST00000620197 HMOX1P09601 288 aa16.25■□□□□ 0.19
SKP2-209ENST00000620197 ESPNB1AK53 854 aa16.25■□□□□ 0.19
SKP2-209ENST00000620197 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
SKP2-209ENST00000620197 SSFA2P28290 1259 aa16.25■□□□□ 0.19
SKP2-209ENST00000620197 SSH2Q76I76 1423 aa16.24■□□□□ 0.19
SKP2-209ENST00000620197 RABEP1Q15276 862 aa16.24■□□□□ 0.19
SKP2-209ENST00000620197 WAPLQ7Z5K2 1190 aa16.24■□□□□ 0.19
SKP2-209ENST00000620197 IL17RAQ96F46 866 aa16.24■□□□□ 0.19
SKP2-209ENST00000620197 BAG4O95429 457 aaKnown RBP16.24■□□□□ 0.19
SKP2-209ENST00000620197 KCNA4P22459 653 aa16.24■□□□□ 0.19
SKP2-209ENST00000620197 ZNF445P59923 1031 aa16.24■□□□□ 0.19
SKP2-209ENST00000620197 NME9Q86XW9 330 aa16.23■□□□□ 0.19
SKP2-209ENST00000620197 CHL1O00533 1208 aa16.23■□□□□ 0.19
SKP2-209ENST00000620197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.23■□□□□ 0.19
SKP2-209ENST00000620197 CEP85Q6P2H3 762 aa16.22■□□□□ 0.19
SKP2-209ENST00000620197 USP31Q70CQ4 1352 aa16.22■□□□□ 0.19
SKP2-209ENST00000620197 MSH6P52701 1360 aa16.22■□□□□ 0.19
SKP2-209ENST00000620197 OSBPL3Q9H4L5 887 aa16.21■□□□□ 0.19
SKP2-209ENST00000620197 ZRANB1Q9UGI0 708 aa16.21■□□□□ 0.19
SKP2-209ENST00000620197 SALL3Q9BXA9 1300 aa16.21■□□□□ 0.19
SKP2-209ENST00000620197 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
SKP2-209ENST00000620197 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
SKP2-209ENST00000620197 RPAP2Q8IXW5 612 aaPredicted RBP16.2■□□□□ 0.18
SKP2-209ENST00000620197 PTPRCP08575 1304 aa16.2■□□□□ 0.18
SKP2-209ENST00000620197 LMBRD1Q9NUN5 540 aa16.2■□□□□ 0.18
SKP2-209ENST00000620197 ARHGEF10O15013 1369 aa16.19■□□□□ 0.18
SKP2-209ENST00000620197 CCDC173Q0VFZ6 552 aa16.19■□□□□ 0.18
SKP2-209ENST00000620197 ZDHHC9Q9Y397 364 aa16.19■□□□□ 0.18
SKP2-209ENST00000620197 PRR36Q9H6K5 1346 aa16.18■□□□□ 0.18
SKP2-209ENST00000620197 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
SKP2-209ENST00000620197 OTUD7AQ8TE49 926 aaPredicted RBP16.18■□□□□ 0.18
SKP2-209ENST00000620197 PDLIM2Q96JY6 352 aa16.18■□□□□ 0.18
SKP2-209ENST00000620197 SDSP20132 328 aa16.17■□□□□ 0.18
SKP2-209ENST00000620197 NAP1L5Q96NT1 182 aaPredicted RBP16.17■□□□□ 0.18
SKP2-209ENST00000620197 PIK3C2AO00443 1686 aa16.17■□□□□ 0.18
SKP2-209ENST00000620197 NWD1Q149M9 1564 aa16.16■□□□□ 0.18
SKP2-209ENST00000620197 CWC22Q9HCG8 908 aaKnown RBP16.16■□□□□ 0.18
SKP2-209ENST00000620197 KDRP35968 1356 aa16.16■□□□□ 0.18
SKP2-209ENST00000620197 NUDT16Q96DE0 195 aaKnown RBP16.16■□□□□ 0.18
SKP2-209ENST00000620197 NUCB2P80303 420 aa16.16■□□□□ 0.18
SKP2-209ENST00000620197 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
SKP2-209ENST00000620197 PKP1Q13835 747 aa16.15■□□□□ 0.18
SKP2-209ENST00000620197 HS1BP3Q53T59 392 aa16.15■□□□□ 0.18
SKP2-209ENST00000620197 ADAMTS13Q76LX8 1427 aa16.15■□□□□ 0.18
SKP2-209ENST00000620197 USP6P35125 1406 aa16.15■□□□□ 0.18
SKP2-209ENST00000620197 ELL2O00472 640 aaPredicted RBP16.14■□□□□ 0.18
SKP2-209ENST00000620197 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.18
SKP2-209ENST00000620197 PXDNLA1KZ92 1463 aa16.14■□□□□ 0.17
SKP2-209ENST00000620197 DCTN1Q14203 1278 aa16.14■□□□□ 0.17
SKP2-209ENST00000620197 RRP9O43818 475 aaKnown RBP16.14■□□□□ 0.17
SKP2-209ENST00000620197 RRS1Q15050 365 aaKnown RBP16.14■□□□□ 0.17
SKP2-209ENST00000620197 COG3Q96JB2 828 aa16.14■□□□□ 0.17
SKP2-209ENST00000620197 TSPOAP1O95153 1857 aa16.14■□□□□ 0.17
SKP2-209ENST00000620197 RGPD8O14715 1765 aaPredicted RBP16.13■□□□□ 0.17
SKP2-209ENST00000620197 ZSCAN23Q3MJ62 389 aa16.13■□□□□ 0.17
SKP2-209ENST00000620197 AEBP1Q8IUX7 1158 aa16.13■□□□□ 0.17
SKP2-209ENST00000620197 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
SKP2-209ENST00000620197 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
SKP2-209ENST00000620197 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.13■□□□□ 0.17
SKP2-209ENST00000620197 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
SKP2-209ENST00000620197 NASPP49321 788 aaPredicted RBP16.12■□□□□ 0.17
SKP2-209ENST00000620197 DIP2AQ14689 1571 aa16.12■□□□□ 0.17
SKP2-209ENST00000620197 CEP170BQ9Y4F5 1589 aaPredicted RBP16.12■□□□□ 0.17
SKP2-209ENST00000620197 ROBO2Q9HCK4 1378 aa16.12■□□□□ 0.17
SKP2-209ENST00000620197 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
SKP2-209ENST00000620197 HAP1P54257 671 aaPredicted RBP16.11■□□□□ 0.17
SKP2-209ENST00000620197 MED1Q15648 1581 aaPredicted RBP16.11■□□□□ 0.17
SKP2-209ENST00000620197 MEIS3Q99687 375 aa16.11■□□□□ 0.17
SKP2-209ENST00000620197 TERF1P54274 439 aa16.1■□□□□ 0.17
SKP2-209ENST00000620197 ZSCAN30Q86W11 494 aa16.1■□□□□ 0.17
SKP2-209ENST00000620197 KDM3BQ7LBC6 1761 aa16.1■□□□□ 0.17
SKP2-209ENST00000620197 PLEKHG3A1L390 1219 aa16.1■□□□□ 0.17
SKP2-209ENST00000620197 HSP90AA1P07900 732 aaKnown RBP16.1■□□□□ 0.17
SKP2-209ENST00000620197 CUL4AQ13619 759 aa16.1■□□□□ 0.17
SKP2-209ENST00000620197 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
SKP2-209ENST00000620197 ZGPATQ8N5A5 531 aaKnown RBP16.09■□□□□ 0.17
SKP2-209ENST00000620197 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
SKP2-209ENST00000620197 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
SKP2-209ENST00000620197 HSP90AA2PQ14568 343 aaPredicted RBP16.09■□□□□ 0.17
SKP2-209ENST00000620197 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.09■□□□□ 0.17
SKP2-209ENST00000620197 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
SKP2-209ENST00000620197 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
SKP2-209ENST00000620197 TTC21BQ7Z4L5 1316 aa16.09■□□□□ 0.17
SKP2-209ENST00000620197 OFD1O75665 1012 aa16.08■□□□□ 0.17
SKP2-209ENST00000620197 RBSNQ9H1K0 784 aa16.08■□□□□ 0.16
SKP2-209ENST00000620197 SMARCA5O60264 1052 aaPredicted RBP16.07■□□□□ 0.16
SKP2-209ENST00000620197 PDE1AP54750 535 aa16.07■□□□□ 0.16
SKP2-209ENST00000620197 ERC2O15083 957 aa16.07■□□□□ 0.16
SKP2-209ENST00000620197 ZNF500O60304 480 aaPredicted RBP16.07■□□□□ 0.16
SKP2-209ENST00000620197 TPM2P07951 284 aa16.07■□□□□ 0.16
SKP2-209ENST00000620197 REC8O95072 547 aa16.07■□□□□ 0.16
SKP2-209ENST00000620197 MCTP1Q6DN14 999 aa16.07■□□□□ 0.16
SKP2-209ENST00000620197 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
SKP2-209ENST00000620197 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
SKP2-209ENST00000620197 CHD2O14647 1828 aaKnown RBP16.06■□□□□ 0.16
SKP2-209ENST00000620197 MCM10Q7L590 875 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms