RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 COL18A1P39060 1754 aa9.87□□□□□ -0.83
TVP23A-211ENST00000619408 LMO7Q8WWI1 1683 aa9.87□□□□□ -0.83
TVP23A-211ENST00000619408 RNF123Q5XPI4 1314 aa9.86□□□□□ -0.83
TVP23A-211ENST00000619408 COL16A1Q07092 1604 aaPredicted RBP9.86□□□□□ -0.83
TVP23A-211ENST00000619408 DLG5Q8TDM6 1919 aa9.86□□□□□ -0.83
TVP23A-211ENST00000619408 RRP1P56182 461 aaKnown RBP9.86□□□□□ -0.83
TVP23A-211ENST00000619408 CHRNA2Q15822 529 aa9.86□□□□□ -0.83
TVP23A-211ENST00000619408 NBPF6Q5VWK0 638 aa9.86□□□□□ -0.83
TVP23A-211ENST00000619408 RTF1Q92541 710 aaKnown RBP9.86□□□□□ -0.83
TVP23A-211ENST00000619408 NBPF4Q96M43 638 aa9.86□□□□□ -0.83
TVP23A-211ENST00000619408 RGPD5Q99666 1765 aa9.86□□□□□ -0.83
TVP23A-211ENST00000619408 UBAP1LF5GYI3 381 aa9.85□□□□□ -0.83
TVP23A-211ENST00000619408 CT47B1P0C2W7 299 aaPredicted RBP9.85□□□□□ -0.83
TVP23A-211ENST00000619408 GNAI1P63096 354 aa9.85□□□□□ -0.83
TVP23A-211ENST00000619408 PIP4K2BP78356 416 aa9.85□□□□□ -0.83
TVP23A-211ENST00000619408 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.85□□□□□ -0.83
TVP23A-211ENST00000619408 IFT57Q9NWB7 429 aa9.85□□□□□ -0.83
TVP23A-211ENST00000619408 PODXL2Q9NZ53 605 aa9.85□□□□□ -0.83
TVP23A-211ENST00000619408 AXIN2Q9Y2T1 843 aa9.85□□□□□ -0.83
TVP23A-211ENST00000619408 RGPD2P0DJD1 1756 aa9.85□□□□□ -0.83
TVP23A-211ENST00000619408 MAP3K5Q99683 1374 aa9.85□□□□□ -0.83
TVP23A-211ENST00000619408 HTATSF1O43719 755 aaKnown RBP9.84□□□□□ -0.83
TVP23A-211ENST00000619408 MTHFSDQ2M296 383 aaKnown RBP9.84□□□□□ -0.83
TVP23A-211ENST00000619408 CCDC136Q96JN2 1154 aa9.84□□□□□ -0.83
TVP23A-211ENST00000619408 THUMPD2Q9BTF0 503 aaKnown RBP9.84□□□□□ -0.83
TVP23A-211ENST00000619408 NLRP2Q9NX02 1062 aa9.84□□□□□ -0.83
TVP23A-211ENST00000619408 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
TVP23A-211ENST00000619408 LRRC37A3O60309 1634 aa9.84□□□□□ -0.83
TVP23A-211ENST00000619408 PLEKHG2Q9H7P9 1386 aa9.84□□□□□ -0.83
TVP23A-211ENST00000619408 COL5A2P05997 1499 aaPredicted RBP9.84□□□□□ -0.83
TVP23A-211ENST00000619408 FAM83GA6ND36 823 aa9.83□□□□□ -0.84
TVP23A-211ENST00000619408 GNAT3A8MTJ3 354 aa9.83□□□□□ -0.84
TVP23A-211ENST00000619408 IRX6P78412 446 aaPredicted RBP9.83□□□□□ -0.84
TVP23A-211ENST00000619408 AMOTQ4VCS5 1084 aa9.83□□□□□ -0.84
TVP23A-211ENST00000619408 PLEKHO1Q53GL0 409 aaPredicted RBP9.83□□□□□ -0.84
TVP23A-211ENST00000619408 RAPGEF4Q8WZA2 1011 aa9.83□□□□□ -0.84
TVP23A-211ENST00000619408 TSR2Q969E8 191 aaKnown RBP9.83□□□□□ -0.84
TVP23A-211ENST00000619408 COL14A1Q05707 1796 aaKnown RBP9.83□□□□□ -0.84
TVP23A-211ENST00000619408 WDR17Q8IZU2 1322 aa9.82□□□□□ -0.84
TVP23A-211ENST00000619408 C1orf141Q5JVX7 400 aa9.82□□□□□ -0.84
TVP23A-211ENST00000619408 CFAP44Q96MT7 982 aa9.82□□□□□ -0.84
TVP23A-211ENST00000619408 TATP17735 454 aaPredicted RBP9.81□□□□□ -0.84
TVP23A-211ENST00000619408 CANXP27824 592 aaKnown RBP9.81□□□□□ -0.84
TVP23A-211ENST00000619408 EXOSC9Q06265 439 aaKnown RBP9.81□□□□□ -0.84
TVP23A-211ENST00000619408 DCTN1Q14203 1278 aa9.81□□□□□ -0.84
TVP23A-211ENST00000619408 ZNF530Q6P9A1 599 aaPredicted RBP9.81□□□□□ -0.84
TVP23A-211ENST00000619408 PPP4R3CPQ6ZMV5 832 aa9.81□□□□□ -0.84
TVP23A-211ENST00000619408 TOM1L2Q6ZVM7 507 aa9.81□□□□□ -0.84
TVP23A-211ENST00000619408 MCM10Q7L590 875 aa9.81□□□□□ -0.84
TVP23A-211ENST00000619408 PARP4Q9UKK3 1724 aaKnown RBP9.81□□□□□ -0.84
TVP23A-211ENST00000619408 ZNF853P0CG23 659 aa9.8□□□□□ -0.84
TVP23A-211ENST00000619408 ANP32AP39687 249 aaKnown RBP9.8□□□□□ -0.84
TVP23A-211ENST00000619408 EVA1CP58658 441 aa9.8□□□□□ -0.84
TVP23A-211ENST00000619408 AKAP4Q5JQC9 854 aa9.8□□□□□ -0.84
TVP23A-211ENST00000619408 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
TVP23A-211ENST00000619408 SPG7Q9UQ90 795 aa9.8□□□□□ -0.84
TVP23A-211ENST00000619408 OVOS2A0A0G2JMS6 1433 aa9.8□□□□□ -0.84
TVP23A-211ENST00000619408 CRB1P82279 1406 aa9.8□□□□□ -0.84
TVP23A-211ENST00000619408 MEGF6O75095 1541 aa9.79□□□□□ -0.84
TVP23A-211ENST00000619408 RARSP54136 660 aaKnown RBP9.79□□□□□ -0.84
TVP23A-211ENST00000619408 ZNF428Q96B54 188 aa9.79□□□□□ -0.84
TVP23A-211ENST00000619408 STRN4Q9NRL3 753 aa9.79□□□□□ -0.84
TVP23A-211ENST00000619408 PPP4R2Q9NY27 417 aa9.79□□□□□ -0.84
TVP23A-211ENST00000619408 PKD1L3Q7Z443 1732 aa9.79□□□□□ -0.84
TVP23A-211ENST00000619408 CARD10Q9BWT7 1032 aa9.78□□□□□ -0.84
TVP23A-211ENST00000619408 SMC4Q9NTJ3 1288 aa9.78□□□□□ -0.84
TVP23A-211ENST00000619408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.84
TVP23A-211ENST00000619408 TSPYL4Q9UJ04 414 aa9.78□□□□□ -0.84
TVP23A-211ENST00000619408 PLCH1Q4KWH8 1693 aa9.77□□□□□ -0.84
TVP23A-211ENST00000619408 CEMIPQ8WUJ3 1361 aa9.77□□□□□ -0.84
TVP23A-211ENST00000619408 JCADQ9P266 1359 aa9.77□□□□□ -0.84
TVP23A-211ENST00000619408 CHL1O00533 1208 aa9.77□□□□□ -0.85
TVP23A-211ENST00000619408 PLIN1O60240 522 aa9.77□□□□□ -0.85
TVP23A-211ENST00000619408 BCAR3O75815 825 aa9.77□□□□□ -0.85
TVP23A-211ENST00000619408 BABAM1Q9NWV8 329 aa9.77□□□□□ -0.85
TVP23A-211ENST00000619408 BTG4Q9NY30 223 aa9.77□□□□□ -0.85
TVP23A-211ENST00000619408 KIF16BQ96L93 1317 aa9.77□□□□□ -0.85
TVP23A-211ENST00000619408 NUTM2BA6NNL0 878 aaPredicted RBP9.76□□□□□ -0.85
TVP23A-211ENST00000619408 NUTM2EB1AL46 878 aaPredicted RBP9.76□□□□□ -0.85
TVP23A-211ENST00000619408 ADAMTS2O95450 1211 aa9.76□□□□□ -0.85
TVP23A-211ENST00000619408 TEFQ10587 303 aa9.76□□□□□ -0.85
TVP23A-211ENST00000619408 TAF7Q15545 349 aaPredicted RBP9.76□□□□□ -0.85
TVP23A-211ENST00000619408 TWISTNBQ3B726 338 aaPredicted RBP9.76□□□□□ -0.85
TVP23A-211ENST00000619408 ALDH1L2Q3SY69 923 aa9.76□□□□□ -0.85
TVP23A-211ENST00000619408 LARP1Q6PKG0 1096 aaKnown RBP9.76□□□□□ -0.85
TVP23A-211ENST00000619408 NUTM2AQ8IVF1 878 aaPredicted RBP9.76□□□□□ -0.85
TVP23A-211ENST00000619408 FRAT1Q92837 279 aaPredicted RBP9.76□□□□□ -0.85
TVP23A-211ENST00000619408 IPO9Q96P70 1041 aaKnown RBP9.76□□□□□ -0.85
TVP23A-211ENST00000619408 BCL2L13Q9BXK5 485 aa9.76□□□□□ -0.85
TVP23A-211ENST00000619408 PCDH11XQ9BZA7 1347 aa9.76□□□□□ -0.85
TVP23A-211ENST00000619408 PCDH11YQ9BZA8 1340 aa9.76□□□□□ -0.85
TVP23A-211ENST00000619408 RNMTO43148 476 aaKnown RBP9.75□□□□□ -0.85
TVP23A-211ENST00000619408 HSP90AB1P08238 724 aaKnown RBP9.75□□□□□ -0.85
TVP23A-211ENST00000619408 MS4A1P11836 297 aa9.75□□□□□ -0.85
TVP23A-211ENST00000619408 IL2RBP14784 551 aa9.75□□□□□ -0.85
TVP23A-211ENST00000619408 FAM43AQ8N2R8 423 aa9.75□□□□□ -0.85
TVP23A-211ENST00000619408 IL17REQ8NFR9 667 aa9.75□□□□□ -0.85
TVP23A-211ENST00000619408 ADAMTS7Q9UKP4 1686 aa9.74□□□□□ -0.85
TVP23A-211ENST00000619408 NRAPQ86VF7 1730 aa9.74□□□□□ -0.85
TVP23A-211ENST00000619408 NWD2Q9ULI1 1742 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms