RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 USP19O94966 1318 aa24.3■■□□□ 1.48
PSPC1-206ENST00000619300 LTN1O94822 1766 aa24.3■■□□□ 1.48
PSPC1-206ENST00000619300 ITPRIPQ8IWB1 547 aa24.29■■□□□ 1.48
PSPC1-206ENST00000619300 TMEM57Q8N5G2 664 aa24.29■■□□□ 1.48
PSPC1-206ENST00000619300 SLIT3O75094 1523 aa24.29■■□□□ 1.48
PSPC1-206ENST00000619300 ZBTB7CA1YPR0 619 aa24.28■■□□□ 1.48
PSPC1-206ENST00000619300 PDE4AP27815 886 aa24.28■■□□□ 1.48
PSPC1-206ENST00000619300 HAP1P54257 671 aaPredicted RBP24.28■■□□□ 1.48
PSPC1-206ENST00000619300 TRPM3Q9HCF6 1732 aaPredicted RBP24.27■■□□□ 1.48
PSPC1-206ENST00000619300 NBPF6Q5VWK0 638 aa24.27■■□□□ 1.48
PSPC1-206ENST00000619300 NBPF4Q96M43 638 aa24.27■■□□□ 1.48
PSPC1-206ENST00000619300 KIAA0232Q92628 1395 aa24.27■■□□□ 1.48
PSPC1-206ENST00000619300 LMTK3Q96Q04 1460 aa24.27■■□□□ 1.48
PSPC1-206ENST00000619300 GNAT3A8MTJ3 354 aa24.27■■□□□ 1.48
PSPC1-206ENST00000619300 USHBP1Q8N6Y0 703 aa24.26■■□□□ 1.47
PSPC1-206ENST00000619300 RWDD1Q9H446 243 aaPredicted RBP24.26■■□□□ 1.47
PSPC1-206ENST00000619300 BACH2Q9BYV9 841 aa24.25■■□□□ 1.47
PSPC1-206ENST00000619300 PHRF1Q9P1Y6 1649 aaKnown RBP24.25■■□□□ 1.47
PSPC1-206ENST00000619300 PLEKHG5O94827 1062 aa24.25■■□□□ 1.47
PSPC1-206ENST00000619300 MSH6P52701 1360 aa24.25■■□□□ 1.47
PSPC1-206ENST00000619300 KRT24Q2M2I5 525 aa24.23■■□□□ 1.47
PSPC1-206ENST00000619300 MIS18AQ9NYP9 233 aa24.23■■□□□ 1.47
PSPC1-206ENST00000619300 TSPYL4Q9UJ04 414 aa24.23■■□□□ 1.47
PSPC1-206ENST00000619300 ZBTB40Q9NUA8 1239 aa24.22■■□□□ 1.47
PSPC1-206ENST00000619300 DDX17Q92841 729 aaKnown RBP24.22■■□□□ 1.47
PSPC1-206ENST00000619300 MAP3K5Q99683 1374 aa24.21■■□□□ 1.47
PSPC1-206ENST00000619300 NPHP3Q7Z494 1330 aa24.21■■□□□ 1.47
PSPC1-206ENST00000619300 RGS3P49796 1198 aa24.2■■□□□ 1.46
PSPC1-206ENST00000619300 IL17REQ8NFR9 667 aa24.2■■□□□ 1.46
PSPC1-206ENST00000619300 LRRC59Q96AG4 307 aaKnown RBP24.2■■□□□ 1.46
PSPC1-206ENST00000619300 API5Q9BZZ5 524 aaKnown RBP24.2■■□□□ 1.46
PSPC1-206ENST00000619300 ANKRD24Q8TF21 1146 aa24.18■■□□□ 1.46
PSPC1-206ENST00000619300 CHMP4BQ9H444 224 aaKnown RBP24.18■■□□□ 1.46
PSPC1-206ENST00000619300 STRCQ7RTU9 1775 aa24.18■■□□□ 1.46
PSPC1-206ENST00000619300 ABCC4O15439 1325 aa24.17■■□□□ 1.46
PSPC1-206ENST00000619300 HDAC1Q13547 482 aaPredicted RBP24.17■■□□□ 1.46
PSPC1-206ENST00000619300 AXIN2Q9Y2T1 843 aa24.17■■□□□ 1.46
PSPC1-206ENST00000619300 ALS2Q96Q42 1657 aa24.17■■□□□ 1.46
PSPC1-206ENST00000619300 BABAM1Q9NWV8 329 aa24.17■■□□□ 1.46
PSPC1-206ENST00000619300 ZBTB7BO15156 539 aaPredicted RBP24.15■■□□□ 1.46
PSPC1-206ENST00000619300 ZC3H6P61129 1189 aaKnown RBP24.15■■□□□ 1.46
PSPC1-206ENST00000619300 TAF7Q15545 349 aaPredicted RBP24.15■■□□□ 1.46
PSPC1-206ENST00000619300 PLEKHO1Q53GL0 409 aaPredicted RBP24.14■■□□□ 1.45
PSPC1-206ENST00000619300 MED1Q15648 1581 aaPredicted RBP24.14■■□□□ 1.45
PSPC1-206ENST00000619300 NCAPD2Q15021 1401 aa24.13■■□□□ 1.45
PSPC1-206ENST00000619300 LRRC37A3O60309 1634 aa24.13■■□□□ 1.45
PSPC1-206ENST00000619300 FAM161AQ3B820 660 aa24.12■■□□□ 1.45
PSPC1-206ENST00000619300 AMOTQ4VCS5 1084 aa24.12■■□□□ 1.45
PSPC1-206ENST00000619300 PDZRN3Q9UPQ7 1066 aa24.12■■□□□ 1.45
PSPC1-206ENST00000619300 ZNF335Q9H4Z2 1342 aaPredicted RBP24.12■■□□□ 1.45
PSPC1-206ENST00000619300 TNS3Q68CZ2 1445 aa24.11■■□□□ 1.45
PSPC1-206ENST00000619300 BRINP3Q76B58 766 aa24.11■■□□□ 1.45
PSPC1-206ENST00000619300 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
PSPC1-206ENST00000619300 PTPRCP08575 1304 aa24.1■■□□□ 1.45
PSPC1-206ENST00000619300 XIRP1Q702N8 1843 aaKnown RBP24.1■■□□□ 1.45
PSPC1-206ENST00000619300 CEMIPQ8WUJ3 1361 aa24.1■■□□□ 1.45
PSPC1-206ENST00000619300 PXDNQ92626 1479 aa24.1■■□□□ 1.45
PSPC1-206ENST00000619300 SLC4A2P04920 1241 aa24.1■■□□□ 1.45
PSPC1-206ENST00000619300 ANP32AP39687 249 aaKnown RBP24.1■■□□□ 1.45
PSPC1-206ENST00000619300 AKAP4Q5JQC9 854 aa24.1■■□□□ 1.45
PSPC1-206ENST00000619300 ERBB3P21860 1342 aa24.09■■□□□ 1.45
PSPC1-206ENST00000619300 RGPD2P0DJD1 1756 aa24.09■■□□□ 1.45
PSPC1-206ENST00000619300 MSH5O43196 834 aa24.08■■□□□ 1.45
PSPC1-206ENST00000619300 ZNF530Q6P9A1 599 aaPredicted RBP24.08■■□□□ 1.45
PSPC1-206ENST00000619300 SOS1Q07889 1333 aaPredicted RBP24.08■■□□□ 1.44
PSPC1-206ENST00000619300 INTS3Q68E01 1043 aaKnown RBP24.08■■□□□ 1.44
PSPC1-206ENST00000619300 LGR6Q9HBX8 967 aa24.08■■□□□ 1.44
PSPC1-206ENST00000619300 SLAIN2Q9P270 581 aa24.08■■□□□ 1.44
PSPC1-206ENST00000619300 C8orf34Q49A92 452 aa24.07■■□□□ 1.44
PSPC1-206ENST00000619300 CABLES1Q8TDN4 633 aa24.07■■□□□ 1.44
PSPC1-206ENST00000619300 SMC5Q8IY18 1101 aa24.06■■□□□ 1.44
PSPC1-206ENST00000619300 RGS12O14924 1447 aa24.05■■□□□ 1.44
PSPC1-206ENST00000619300 C1orf141Q5JVX7 400 aa24.04■■□□□ 1.44
PSPC1-206ENST00000619300 CCDC30Q5VVM6 783 aa24.04■■□□□ 1.44
PSPC1-206ENST00000619300 STK31Q9BXU1 1019 aa24.03■■□□□ 1.44
PSPC1-206ENST00000619300 CAMTA1Q9Y6Y1 1673 aa24.03■■□□□ 1.44
PSPC1-206ENST00000619300 MPRIPQ6WCQ1 1025 aa24.01■■□□□ 1.43
PSPC1-206ENST00000619300 NLRP2Q9NX02 1062 aa24.01■■□□□ 1.43
PSPC1-206ENST00000619300 TEFQ10587 303 aa24.01■■□□□ 1.43
PSPC1-206ENST00000619300 G2E3Q7L622 706 aa24.01■■□□□ 1.43
PSPC1-206ENST00000619300 C1orf115Q9H7X2 142 aa24.01■■□□□ 1.43
PSPC1-206ENST00000619300 SOS2Q07890 1332 aaPredicted RBP24■■□□□ 1.43
PSPC1-206ENST00000619300 RNMTO43148 476 aaKnown RBP24■■□□□ 1.43
PSPC1-206ENST00000619300 NPM2Q86SE8 214 aaKnown RBP24■■□□□ 1.43
PSPC1-206ENST00000619300 CPDO75976 1380 aa24■■□□□ 1.43
PSPC1-206ENST00000619300 IPO9Q96P70 1041 aaKnown RBP24■■□□□ 1.43
PSPC1-206ENST00000619300 RGPD5Q99666 1765 aa23.99■■□□□ 1.43
PSPC1-206ENST00000619300 LMO7Q8WWI1 1683 aa23.99■■□□□ 1.43
PSPC1-206ENST00000619300 CHRNA2Q15822 529 aa23.99■■□□□ 1.43
PSPC1-206ENST00000619300 RAPGEF4Q8WZA2 1011 aa23.98■■□□□ 1.43
PSPC1-206ENST00000619300 EIF4A1P60842 406 aaKnown RBP23.98■■□□□ 1.43
PSPC1-206ENST00000619300 COL18A1P39060 1754 aa23.97■■□□□ 1.43
PSPC1-206ENST00000619300 BTBD11A6QL63 1104 aa23.97■■□□□ 1.43
PSPC1-206ENST00000619300 CSB-PGBD3P0DP91 1061 aa23.97■■□□□ 1.43
PSPC1-206ENST00000619300 SIRT2Q8IXJ6 389 aa23.97■■□□□ 1.43
PSPC1-206ENST00000619300 OVOS2A0A0G2JMS6 1433 aa23.97■■□□□ 1.43
PSPC1-206ENST00000619300 NUCB1Q02818 461 aa23.96■■□□□ 1.43
PSPC1-206ENST00000619300 GCC1Q96CN9 775 aa23.96■■□□□ 1.43
PSPC1-206ENST00000619300 ABCC6O95255 1503 aa23.96■■□□□ 1.43
PSPC1-206ENST00000619300 NECTIN2Q92692 538 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms