RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 IL13P35225 146 aa28.35■■■□□ 2.13
PCSK6-218ENST00000619160 UQCRHLA0A096LP55 91 aa28.35■■■□□ 2.13
PCSK6-218ENST00000619160 UQCRHP07919 91 aa28.35■■■□□ 2.13
PCSK6-218ENST00000619160 FOXD4L6Q3SYB3 417 aaPredicted RBP28.35■■■□□ 2.13
PCSK6-218ENST00000619160 FOXD4L3Q6VB84 417 aaPredicted RBP28.35■■■□□ 2.13
PCSK6-218ENST00000619160 POGZQ7Z3K3 1410 aa28.35■■■□□ 2.13
PCSK6-218ENST00000619160 ANKRD44Q8N8A2 993 aa28.34■■■□□ 2.13
PCSK6-218ENST00000619160 CYP2E1P05181 493 aaPredicted RBP28.34■■■□□ 2.13
PCSK6-218ENST00000619160 FRMPD1Q5SYB0 1578 aa28.34■■■□□ 2.13
PCSK6-218ENST00000619160 REC8O95072 547 aa28.34■■■□□ 2.13
PCSK6-218ENST00000619160 PTPRMP28827 1452 aa28.33■■■□□ 2.12
PCSK6-218ENST00000619160 CEP85Q6P2H3 762 aa28.32■■■□□ 2.12
PCSK6-218ENST00000619160 MEIS3Q99687 375 aa28.32■■■□□ 2.12
PCSK6-218ENST00000619160 NEK4P51957 841 aa28.32■■■□□ 2.12
PCSK6-218ENST00000619160 FBXO31Q5XUX0 539 aaPredicted RBP28.32■■■□□ 2.12
PCSK6-218ENST00000619160 SLC4A10Q6U841 1118 aa28.31■■■□□ 2.12
PCSK6-218ENST00000619160 ZDHHC9Q9Y397 364 aa28.31■■■□□ 2.12
PCSK6-218ENST00000619160 NSFL1CQ9UNZ2 370 aaKnown RBP28.31■■■□□ 2.12
PCSK6-218ENST00000619160 TPRNQ4KMQ1 711 aa28.3■■■□□ 2.12
PCSK6-218ENST00000619160 TMEM63CQ9P1W3 806 aa28.3■■■□□ 2.12
PCSK6-218ENST00000619160 TSHZ3Q63HK5 1081 aa28.3■■■□□ 2.12
PCSK6-218ENST00000619160 HECW2Q9P2P5 1572 aa28.3■■■□□ 2.12
PCSK6-218ENST00000619160 RPAP2Q8IXW5 612 aaPredicted RBP28.29■■■□□ 2.12
PCSK6-218ENST00000619160 ERC2O15083 957 aa28.29■■■□□ 2.12
PCSK6-218ENST00000619160 NOL7Q9UMY1 257 aaKnown RBP28.29■■■□□ 2.12
PCSK6-218ENST00000619160 MCM10Q7L590 875 aa28.27■■■□□ 2.12
PCSK6-218ENST00000619160 COG3Q96JB2 828 aa28.27■■■□□ 2.12
PCSK6-218ENST00000619160 RIMS2Q9UQ26 1411 aa28.27■■■□□ 2.12
PCSK6-218ENST00000619160 PTMAP06454 111 aaKnown RBP28.27■■■□□ 2.12
PCSK6-218ENST00000619160 MLH3Q9UHC1 1453 aa28.27■■■□□ 2.12
PCSK6-218ENST00000619160 AEBP1Q8IUX7 1158 aa28.26■■■□□ 2.11
PCSK6-218ENST00000619160 NCKAP5LQ9HCH0 1330 aa28.25■■■□□ 2.11
PCSK6-218ENST00000619160 MSH6P52701 1360 aa28.25■■■□□ 2.11
PCSK6-218ENST00000619160 SIGLEC1Q9BZZ2 1709 aa28.25■■■□□ 2.11
PCSK6-218ENST00000619160 LRSAM1Q6UWE0 723 aa28.24■■■□□ 2.11
PCSK6-218ENST00000619160 SULT6B1Q6IMI4 303 aa28.24■■■□□ 2.11
PCSK6-218ENST00000619160 MPNDQ8N594 471 aa28.23■■■□□ 2.11
PCSK6-218ENST00000619160 TMX3Q96JJ7 454 aa28.23■■■□□ 2.11
PCSK6-218ENST00000619160 HS1BP3Q53T59 392 aa28.23■■■□□ 2.11
PCSK6-218ENST00000619160 MIS18AQ9NYP9 233 aa28.23■■■□□ 2.11
PCSK6-218ENST00000619160 SLC4A2P04920 1241 aa28.22■■■□□ 2.11
PCSK6-218ENST00000619160 PDLIM2Q96JY6 352 aa28.22■■■□□ 2.11
PCSK6-218ENST00000619160 SOX12O15370 315 aa28.22■■■□□ 2.11
PCSK6-218ENST00000619160 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.22■■■□□ 2.11
PCSK6-218ENST00000619160 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.22■■■□□ 2.11
PCSK6-218ENST00000619160 JARID2Q92833 1246 aaPredicted RBP28.22■■■□□ 2.11
PCSK6-218ENST00000619160 ZKSCAN5Q9Y2L8 839 aa28.22■■■□□ 2.11
PCSK6-218ENST00000619160 F6X3S4 739 aa28.21■■■□□ 2.11
PCSK6-218ENST00000619160 EXOC6BQ9Y2D4 811 aa28.21■■■□□ 2.11
PCSK6-218ENST00000619160 HMMRO75330 724 aa28.2■■■□□ 2.11
PCSK6-218ENST00000619160 ATP10DQ9P241 1426 aa28.2■■■□□ 2.11
PCSK6-218ENST00000619160 RTL1A6NKG5 1358 aa28.2■■■□□ 2.11
PCSK6-218ENST00000619160 RILPL2Q969X0 211 aa28.2■■■□□ 2.1
PCSK6-218ENST00000619160 GDPD2Q9HCC8 539 aa28.19■■■□□ 2.1
PCSK6-218ENST00000619160 ANO2Q9NQ90 1003 aa28.19■■■□□ 2.1
PCSK6-218ENST00000619160 ARHGEF40Q8TER5 1519 aa28.19■■■□□ 2.1
PCSK6-218ENST00000619160 TRIM6-TRIM34B2RNG4 842 aa28.19■■■□□ 2.1
PCSK6-218ENST00000619160 PIK3C2BO00750 1634 aa28.19■■■□□ 2.1
PCSK6-218ENST00000619160 ZNF500O60304 480 aaPredicted RBP28.18■■■□□ 2.1
PCSK6-218ENST00000619160 HAP1P54257 671 aaPredicted RBP28.18■■■□□ 2.1
PCSK6-218ENST00000619160 PDE1AP54750 535 aa28.18■■■□□ 2.1
PCSK6-218ENST00000619160 CCDC39Q9UFE4 941 aa28.17■■■□□ 2.1
PCSK6-218ENST00000619160 MBD3O95983 291 aa28.17■■■□□ 2.1
PCSK6-218ENST00000619160 KIF24Q5T7B8 1368 aa28.16■■■□□ 2.1
PCSK6-218ENST00000619160 ANKRD26Q9UPS8 1709 aa28.16■■■□□ 2.1
PCSK6-218ENST00000619160 TSC1Q92574 1164 aa28.16■■■□□ 2.1
PCSK6-218ENST00000619160 UPF3BQ9BZI7 483 aaKnown RBP28.16■■■□□ 2.1
PCSK6-218ENST00000619160 CDC42BPGQ6DT37 1551 aa28.15■■■□□ 2.1
PCSK6-218ENST00000619160 DNTTIP2Q5QJE6 756 aaKnown RBP28.15■■■□□ 2.1
PCSK6-218ENST00000619160 MAP7D2Q96T17 732 aa28.15■■■□□ 2.1
PCSK6-218ENST00000619160 REREQ9P2R6 1566 aa28.14■■■□□ 2.1
PCSK6-218ENST00000619160 KNDC1Q76NI1 1749 aa28.14■■■□□ 2.1
PCSK6-218ENST00000619160 PALD1Q9ULE6 856 aa28.14■■■□□ 2.1
PCSK6-218ENST00000619160 MCCP23508 829 aa28.14■■■□□ 2.09
PCSK6-218ENST00000619160 TXNDC2Q86VQ3 553 aa28.13■■■□□ 2.09
PCSK6-218ENST00000619160 CSPP1Q1MSJ5 1256 aa28.12■■■□□ 2.09
PCSK6-218ENST00000619160 TSPY26PQ9H489 355 aa28.12■■■□□ 2.09
PCSK6-218ENST00000619160 G2E3Q7L622 706 aa28.12■■■□□ 2.09
PCSK6-218ENST00000619160 ARHGAP31Q2M1Z3 1444 aa28.11■■■□□ 2.09
PCSK6-218ENST00000619160 WASLO00401 505 aaPredicted RBP28.11■■■□□ 2.09
PCSK6-218ENST00000619160 TERF1P54274 439 aa28.11■■■□□ 2.09
PCSK6-218ENST00000619160 NUDT16Q96DE0 195 aaKnown RBP28.11■■■□□ 2.09
PCSK6-218ENST00000619160 CHL1O00533 1208 aa28.11■■■□□ 2.09
PCSK6-218ENST00000619160 PTPRCP08575 1304 aa28.1■■■□□ 2.09
PCSK6-218ENST00000619160 NUTM2FA1L443 756 aa28.1■■■□□ 2.09
PCSK6-218ENST00000619160 MAP2P11137 1827 aaKnown RBP28.1■■■□□ 2.09
PCSK6-218ENST00000619160 EIF4A2Q14240 407 aaKnown RBP28.1■■■□□ 2.09
PCSK6-218ENST00000619160 BRD1O95696 1058 aa28.09■■■□□ 2.09
PCSK6-218ENST00000619160 NECTIN2Q92692 538 aa28.09■■■□□ 2.09
PCSK6-218ENST00000619160 ESYT1Q9BSJ8 1104 aa28.09■■■□□ 2.09
PCSK6-218ENST00000619160 KIF20BQ96Q89 1820 aa28.08■■■□□ 2.09
PCSK6-218ENST00000619160 RGS12O14924 1447 aa28.08■■■□□ 2.09
PCSK6-218ENST00000619160 SYAP1Q96A49 352 aaPredicted RBP28.08■■■□□ 2.09
PCSK6-218ENST00000619160 EDC4Q6P2E9 1401 aaKnown RBP28.08■■■□□ 2.09
PCSK6-218ENST00000619160 SMAP1Q8IYB5 467 aaPredicted RBP28.07■■■□□ 2.08
PCSK6-218ENST00000619160 CDK12Q9NYV4 1490 aaPredicted RBP28.07■■■□□ 2.08
PCSK6-218ENST00000619160 FAM177BA6PVY3 158 aa28.07■■■□□ 2.08
PCSK6-218ENST00000619160 GADD45BO75293 160 aaPredicted RBP28.07■■■□□ 2.08
PCSK6-218ENST00000619160 MCM2P49736 904 aa28.07■■■□□ 2.08
PCSK6-218ENST00000619160 ATP7BP35670 1465 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms