RNA–Protein interactions for RNA: ENST00000619158.1

CDH11-219, Transcript of cadherin 11, humanhuman

Gene CDH11, Length 3,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-219ENST00000619158 NRXN2Q9P2S2 1712 aa7.37□□□□□ -1.23
CDH11-219ENST00000619158 WDR17Q8IZU2 1322 aa7.36□□□□□ -1.23
CDH11-219ENST00000619158 FLT4P35916 1363 aa7.36□□□□□ -1.23
CDH11-219ENST00000619158 SRPK2P78362 688 aaKnown RBP7.36□□□□□ -1.23
CDH11-219ENST00000619158 SAFB2Q14151 953 aaKnown RBP eCLIP7.36□□□□□ -1.23
CDH11-219ENST00000619158 SCN7AQ01118 1682 aa7.36□□□□□ -1.23
CDH11-219ENST00000619158 GCP02774 474 aa7.36□□□□□ -1.23
CDH11-219ENST00000619158 ERBB3P21860 1342 aa7.35□□□□□ -1.23
CDH11-219ENST00000619158 NLRP13Q86W25 1043 aa7.35□□□□□ -1.23
CDH11-219ENST00000619158 DLEC1Q9Y238 1755 aa7.35□□□□□ -1.23
CDH11-219ENST00000619158 NME9Q86XW9 330 aa7.35□□□□□ -1.23
CDH11-219ENST00000619158 BRD2P25440 801 aaKnown RBP7.34□□□□□ -1.23
CDH11-219ENST00000619158 ILDR2Q71H61 639 aa7.34□□□□□ -1.23
CDH11-219ENST00000619158 HDGFL2Q7Z4V5 671 aaPredicted RBP7.34□□□□□ -1.23
CDH11-219ENST00000619158 ARFGEF2Q9Y6D5 1785 aa7.34□□□□□ -1.23
CDH11-219ENST00000619158 IP6K1Q92551 441 aa7.34□□□□□ -1.23
CDH11-219ENST00000619158 KCPQ6ZWJ8 1503 aa7.34□□□□□ -1.23
CDH11-219ENST00000619158 PDE4CQ08493 712 aa7.33□□□□□ -1.24
CDH11-219ENST00000619158 TRPC5Q9UL62 973 aaPredicted RBP7.33□□□□□ -1.24
CDH11-219ENST00000619158 AXIN2Q9Y2T1 843 aa7.33□□□□□ -1.24
CDH11-219ENST00000619158 IGSF1Q8N6C5 1336 aa7.33□□□□□ -1.24
CDH11-219ENST00000619158 RBM6P78332 1123 aaKnown RBP7.33□□□□□ -1.24
CDH11-219ENST00000619158 NGDNQ8NEJ9 315 aaKnown RBP7.33□□□□□ -1.24
CDH11-219ENST00000619158 MAP3K19Q56UN5 1328 aa7.33□□□□□ -1.24
CDH11-219ENST00000619158 DHX37Q8IY37 1157 aaKnown RBP7.33□□□□□ -1.24
CDH11-219ENST00000619158 GJD4Q96KN9 370 aaPredicted RBP7.33□□□□□ -1.24
CDH11-219ENST00000619158 CARD10Q9BWT7 1032 aa7.33□□□□□ -1.24
CDH11-219ENST00000619158 ZRANB1Q9UGI0 708 aa7.33□□□□□ -1.24
CDH11-219ENST00000619158 BRCA1P38398 1863 aaKnown RBP7.32□□□□□ -1.24
CDH11-219ENST00000619158 HOXC9P31274 260 aa7.32□□□□□ -1.24
CDH11-219ENST00000619158 ZEB1P37275 1124 aaPredicted RBP7.32□□□□□ -1.24
CDH11-219ENST00000619158 XPCQ01831 940 aaPredicted RBP7.32□□□□□ -1.24
CDH11-219ENST00000619158 TAF7LQ5H9L4 462 aa7.32□□□□□ -1.24
CDH11-219ENST00000619158 LAMB2P55268 1798 aa7.31□□□□□ -1.24
CDH11-219ENST00000619158 ANKRD36CQ5JPF3 1778 aa7.31□□□□□ -1.24
CDH11-219ENST00000619158 SPOCK2Q92563 424 aa7.31□□□□□ -1.24
CDH11-219ENST00000619158 RGL2O15211 777 aa7.31□□□□□ -1.24
CDH11-219ENST00000619158 ABTB2Q8N961 1025 aa7.31□□□□□ -1.24
CDH11-219ENST00000619158 EP400Q96L91 3159 aa7.31□□□□□ -1.24
CDH11-219ENST00000619158 POLKQ9UBT6 870 aa7.3□□□□□ -1.24
CDH11-219ENST00000619158 USP21Q9UK80 565 aa7.3□□□□□ -1.24
CDH11-219ENST00000619158 CABLES1Q8TDN4 633 aa7.29□□□□□ -1.24
CDH11-219ENST00000619158 CDCA7Q9BWT1 371 aaPredicted RBP7.29□□□□□ -1.24
CDH11-219ENST00000619158 PANK3Q9H999 370 aa7.29□□□□□ -1.24
CDH11-219ENST00000619158 NUTM2FA1L443 756 aa7.29□□□□□ -1.24
CDH11-219ENST00000619158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDH11-219ENST00000619158 KDM6AO15550 1401 aaPredicted RBP7.29□□□□□ -1.24
CDH11-219ENST00000619158 NKX1-1Q15270 411 aaPredicted RBP7.29□□□□□ -1.24
CDH11-219ENST00000619158 SOCS7O14512 581 aa7.28□□□□□ -1.24
CDH11-219ENST00000619158 TSHZ2Q9NRE2 1034 aa7.28□□□□□ -1.24
CDH11-219ENST00000619158 IL13P35225 146 aa7.27□□□□□ -1.25
CDH11-219ENST00000619158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDH11-219ENST00000619158 NLRP6P59044 892 aa7.27□□□□□ -1.25
CDH11-219ENST00000619158 BTG4Q9NY30 223 aa7.27□□□□□ -1.25
CDH11-219ENST00000619158 CACNA1FO60840 1977 aa7.27□□□□□ -1.25
CDH11-219ENST00000619158 MYH14Q7Z406 1995 aaKnown RBP7.26□□□□□ -1.25
CDH11-219ENST00000619158 RXRBP28702 533 aa7.26□□□□□ -1.25
CDH11-219ENST00000619158 LARP1Q6PKG0 1096 aaKnown RBP7.26□□□□□ -1.25
CDH11-219ENST00000619158 COG3Q96JB2 828 aa7.26□□□□□ -1.25
CDH11-219ENST00000619158 QTRT2Q9H974 415 aaKnown RBP7.26□□□□□ -1.25
CDH11-219ENST00000619158 FGD1P98174 961 aa7.26□□□□□ -1.25
CDH11-219ENST00000619158 TCP11L2Q8N4U5 519 aa7.26□□□□□ -1.25
CDH11-219ENST00000619158 SPRYD3Q8NCJ5 442 aa7.26□□□□□ -1.25
CDH11-219ENST00000619158 C8orf37Q96NL8 207 aa7.26□□□□□ -1.25
CDH11-219ENST00000619158 CEMIPQ8WUJ3 1361 aa7.26□□□□□ -1.25
CDH11-219ENST00000619158 NBR1Q14596 966 aa7.25□□□□□ -1.25
CDH11-219ENST00000619158 CCDC125Q86Z20 511 aa7.25□□□□□ -1.25
CDH11-219ENST00000619158 ANKRD24Q8TF21 1146 aa7.24□□□□□ -1.25
CDH11-219ENST00000619158 AFDNP55196 1824 aaKnown RBP7.24□□□□□ -1.25
CDH11-219ENST00000619158 A0A1B0GUL6 1792 aa7.24□□□□□ -1.25
CDH11-219ENST00000619158 EIF4A2Q14240 407 aaKnown RBP7.23□□□□□ -1.25
CDH11-219ENST00000619158 UPF1Q92900 1129 aaKnown RBP eCLIP7.23□□□□□ -1.25
CDH11-219ENST00000619158 NGLY1Q96IV0 654 aa7.23□□□□□ -1.25
CDH11-219ENST00000619158 PRDM11Q9NQV5 511 aa7.23□□□□□ -1.25
CDH11-219ENST00000619158 GGNBP2Q9H3C7 697 aa7.23□□□□□ -1.25
CDH11-219ENST00000619158 ZBTB12Q9Y330 459 aaPredicted RBP7.23□□□□□ -1.25
CDH11-219ENST00000619158 HEG1Q9ULI3 1381 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 ARFGEF1Q9Y6D6 1849 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 ADAMTS2O95450 1211 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 HSP90B1P14625 803 aaKnown RBP7.22□□□□□ -1.25
CDH11-219ENST00000619158 NBPF6Q5VWK0 638 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 NBPF4Q96M43 638 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 EMILIN1Q9Y6C2 1016 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 ZNF646O15015 1829 aaPredicted RBP7.22□□□□□ -1.25
CDH11-219ENST00000619158 LRRC37AA6NMS7 1700 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.22□□□□□ -1.25
CDH11-219ENST00000619158 SEPT12Q8IYM1 358 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 PKNOX2Q96KN3 472 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 PLEKHF1Q96S99 279 aa7.22□□□□□ -1.25
CDH11-219ENST00000619158 NUTM2BA6NNL0 878 aaPredicted RBP7.21□□□□□ -1.25
CDH11-219ENST00000619158 NUTM2EB1AL46 878 aaPredicted RBP7.21□□□□□ -1.25
CDH11-219ENST00000619158 CDK11BP21127 795 aaKnown RBP7.21□□□□□ -1.25
CDH11-219ENST00000619158 PPP2R1AP30153 589 aa7.21□□□□□ -1.25
CDH11-219ENST00000619158 CHRNA2Q15822 529 aa7.21□□□□□ -1.25
CDH11-219ENST00000619158 MEX3CQ5U5Q3 659 aaKnown RBP7.21□□□□□ -1.25
CDH11-219ENST00000619158 NUTM2AQ8IVF1 878 aaPredicted RBP7.21□□□□□ -1.25
CDH11-219ENST00000619158 NECTIN2Q92692 538 aa7.21□□□□□ -1.25
CDH11-219ENST00000619158 BCL11BQ9C0K0 894 aaPredicted RBP7.21□□□□□ -1.25
CDH11-219ENST00000619158 ANKRD31Q8N7Z5 1873 aa7.21□□□□□ -1.25
CDH11-219ENST00000619158 MARCH10Q8NA82 808 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms