RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 HSPA5P11021 654 aaKnown RBP12.82□□□□□ -0.36
SYN3-213ENST00000619146 POLD1P28340 1107 aa12.82□□□□□ -0.36
SYN3-213ENST00000619146 ANKRD24Q8TF21 1146 aa12.82□□□□□ -0.36
SYN3-213ENST00000619146 ERBB3P21860 1342 aa12.82□□□□□ -0.36
SYN3-213ENST00000619146 PNPLA7Q6ZV29 1317 aa12.82□□□□□ -0.36
SYN3-213ENST00000619146 TTC21AQ8NDW8 1320 aa12.82□□□□□ -0.36
SYN3-213ENST00000619146 MAP3K5Q99683 1374 aa12.81□□□□□ -0.36
SYN3-213ENST00000619146 YBX3P16989 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
SYN3-213ENST00000619146 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
SYN3-213ENST00000619146 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
SYN3-213ENST00000619146 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
SYN3-213ENST00000619146 TFCP2L1Q9NZI6 479 aa12.81□□□□□ -0.36
SYN3-213ENST00000619146 ZNF526Q8TF50 670 aaPredicted RBP12.8□□□□□ -0.36
SYN3-213ENST00000619146 WWC3Q9ULE0 1092 aa12.8□□□□□ -0.36
SYN3-213ENST00000619146 TMC1Q8TDI8 760 aa12.79□□□□□ -0.36
SYN3-213ENST00000619146 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
SYN3-213ENST00000619146 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
SYN3-213ENST00000619146 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
SYN3-213ENST00000619146 UBR3Q6ZT12 1888 aa12.77□□□□□ -0.37
SYN3-213ENST00000619146 ATP10DQ9P241 1426 aa12.77□□□□□ -0.37
SYN3-213ENST00000619146 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
SYN3-213ENST00000619146 FBLN1P23142 703 aa12.76□□□□□ -0.37
SYN3-213ENST00000619146 COL23A1Q86Y22 540 aaPredicted RBP12.75□□□□□ -0.37
SYN3-213ENST00000619146 SLC16A10Q8TF71 515 aa12.75□□□□□ -0.37
SYN3-213ENST00000619146 SBNO2Q9Y2G9 1366 aa12.75□□□□□ -0.37
SYN3-213ENST00000619146 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
SYN3-213ENST00000619146 USP31Q70CQ4 1352 aa12.74□□□□□ -0.37
SYN3-213ENST00000619146 CDCA8Q53HL2 280 aa12.74□□□□□ -0.37
SYN3-213ENST00000619146 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
SYN3-213ENST00000619146 TESK2Q96S53 571 aa12.74□□□□□ -0.37
SYN3-213ENST00000619146 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
SYN3-213ENST00000619146 CCNL1Q9UK58 526 aaPredicted RBP12.74□□□□□ -0.37
SYN3-213ENST00000619146 NSD2O96028 1365 aa12.73□□□□□ -0.37
SYN3-213ENST00000619146 TMF1P82094 1093 aa12.73□□□□□ -0.37
SYN3-213ENST00000619146 SMIM5Q71RC9 77 aa12.73□□□□□ -0.37
SYN3-213ENST00000619146 MEGF6O75095 1541 aa12.72□□□□□ -0.37
SYN3-213ENST00000619146 ANKRD36BQ8N2N9 1353 aa12.72□□□□□ -0.37
SYN3-213ENST00000619146 C4BP0C0L5 1744 aa12.72□□□□□ -0.37
SYN3-213ENST00000619146 USHBP1Q8N6Y0 703 aa12.72□□□□□ -0.37
SYN3-213ENST00000619146 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
SYN3-213ENST00000619146 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
SYN3-213ENST00000619146 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.37
SYN3-213ENST00000619146 GPBP1L1Q9HC44 474 aaPredicted RBP12.71□□□□□ -0.37
SYN3-213ENST00000619146 A0A1W2PP64 1363 aa12.7□□□□□ -0.38
SYN3-213ENST00000619146 IP6K1Q92551 441 aa12.7□□□□□ -0.38
SYN3-213ENST00000619146 EDC4Q6P2E9 1401 aaKnown RBP12.7□□□□□ -0.38
SYN3-213ENST00000619146 ZCRB1Q8TBF4 217 aaKnown RBP12.69□□□□□ -0.38
SYN3-213ENST00000619146 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
SYN3-213ENST00000619146 MAP2P11137 1827 aaKnown RBP12.68□□□□□ -0.38
SYN3-213ENST00000619146 AMPHP49418 695 aa12.68□□□□□ -0.38
SYN3-213ENST00000619146 PUS7Q96PZ0 661 aaKnown RBP12.68□□□□□ -0.38
SYN3-213ENST00000619146 MAP3K19Q56UN5 1328 aa12.67□□□□□ -0.38
SYN3-213ENST00000619146 WASHC2AQ641Q2 1341 aa12.67□□□□□ -0.38
SYN3-213ENST00000619146 PHF14O94880 888 aa12.67□□□□□ -0.38
SYN3-213ENST00000619146 HOXC9P31274 260 aa12.67□□□□□ -0.38
SYN3-213ENST00000619146 CCDC88AQ3V6T2 1871 aa12.67□□□□□ -0.38
SYN3-213ENST00000619146 KIAA1551Q9HCM1 1747 aa12.66□□□□□ -0.38
SYN3-213ENST00000619146 HSPA6P17066 643 aa12.66□□□□□ -0.38
SYN3-213ENST00000619146 AMIGO3Q86WK7 504 aa12.66□□□□□ -0.38
SYN3-213ENST00000619146 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
SYN3-213ENST00000619146 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
SYN3-213ENST00000619146 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
SYN3-213ENST00000619146 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
SYN3-213ENST00000619146 MPRIPQ6WCQ1 1025 aa12.65□□□□□ -0.38
SYN3-213ENST00000619146 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
SYN3-213ENST00000619146 KIF13BQ9NQT8 1826 aa12.65□□□□□ -0.39
SYN3-213ENST00000619146 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
SYN3-213ENST00000619146 COG3Q96JB2 828 aa12.64□□□□□ -0.39
SYN3-213ENST00000619146 TERF2IPQ9NYB0 399 aa12.64□□□□□ -0.39
SYN3-213ENST00000619146 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
SYN3-213ENST00000619146 ADCY9O60503 1353 aa12.64□□□□□ -0.39
SYN3-213ENST00000619146 POLR3GLQ9BT43 218 aa12.63□□□□□ -0.39
SYN3-213ENST00000619146 PALLDQ8WX93 1383 aa12.63□□□□□ -0.39
SYN3-213ENST00000619146 SBF1O95248 1867 aa12.62□□□□□ -0.39
SYN3-213ENST00000619146 DDX10Q13206 875 aaKnown RBP12.62□□□□□ -0.39
SYN3-213ENST00000619146 CD2APQ9Y5K6 639 aa12.62□□□□□ -0.39
SYN3-213ENST00000619146 RAPGEF4Q8WZA2 1011 aa12.61□□□□□ -0.39
SYN3-213ENST00000619146 AK7Q96M32 723 aa12.61□□□□□ -0.39
SYN3-213ENST00000619146 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
SYN3-213ENST00000619146 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
SYN3-213ENST00000619146 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
SYN3-213ENST00000619146 PCNTO95613 3336 aa12.6□□□□□ -0.39
SYN3-213ENST00000619146 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
SYN3-213ENST00000619146 GGNBP2Q9H3C7 697 aa12.6□□□□□ -0.39
SYN3-213ENST00000619146 C4AP0C0L4 1744 aa12.59□□□□□ -0.39
SYN3-213ENST00000619146 KIF3CO14782 793 aa12.59□□□□□ -0.39
SYN3-213ENST00000619146 TATP17735 454 aaPredicted RBP12.59□□□□□ -0.39
SYN3-213ENST00000619146 CICQ96RK0 1608 aaPredicted RBP12.59□□□□□ -0.39
SYN3-213ENST00000619146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
SYN3-213ENST00000619146 CAPN15O75808 1086 aa12.58□□□□□ -0.4
SYN3-213ENST00000619146 HSP90AB2PQ58FF8 381 aa12.58□□□□□ -0.4
SYN3-213ENST00000619146 COL5A3P25940 1745 aaPredicted RBP12.57□□□□□ -0.4
SYN3-213ENST00000619146 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
SYN3-213ENST00000619146 CYP27B1O15528 508 aa12.57□□□□□ -0.4
SYN3-213ENST00000619146 HTRA3P83110 453 aa12.57□□□□□ -0.4
SYN3-213ENST00000619146 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
SYN3-213ENST00000619146 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
SYN3-213ENST00000619146 PCDH11XQ9BZA7 1347 aa12.57□□□□□ -0.4
SYN3-213ENST00000619146 PCDH11YQ9BZA8 1340 aa12.57□□□□□ -0.4
SYN3-213ENST00000619146 GNPATO15228 680 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms