RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 HOXC9P31274 260 aa18.21■□□□□ 0.51
PDCD6-213ENST00000618970 SPON1Q9HCB6 807 aa18.21■□□□□ 0.51
PDCD6-213ENST00000618970 KCNQ2O43526 872 aa18.2■□□□□ 0.5
PDCD6-213ENST00000618970 PDGFDQ9GZP0 370 aaPredicted RBP18.2■□□□□ 0.5
PDCD6-213ENST00000618970 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
PDCD6-213ENST00000618970 NLRP2Q9NX02 1062 aa18.19■□□□□ 0.5
PDCD6-213ENST00000618970 RTL1A6NKG5 1358 aa18.18■□□□□ 0.5
PDCD6-213ENST00000618970 PPP2R1AP30153 589 aa18.18■□□□□ 0.5
PDCD6-213ENST00000618970 HSP90AB2PQ58FF8 381 aa18.18■□□□□ 0.5
PDCD6-213ENST00000618970 ANKRD24Q8TF21 1146 aa18.18■□□□□ 0.5
PDCD6-213ENST00000618970 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
PDCD6-213ENST00000618970 AMPHP49418 695 aa18.17■□□□□ 0.5
PDCD6-213ENST00000618970 MTHFSP49914 203 aa18.17■□□□□ 0.5
PDCD6-213ENST00000618970 PPP1R1BQ9UD71 204 aaPredicted RBP18.17■□□□□ 0.5
PDCD6-213ENST00000618970 FLT4P35916 1363 aa18.17■□□□□ 0.5
PDCD6-213ENST00000618970 BTAF1O14981 1849 aa18.16■□□□□ 0.5
PDCD6-213ENST00000618970 RALBP1Q15311 655 aa18.16■□□□□ 0.5
PDCD6-213ENST00000618970 TXNRD1Q16881 649 aa18.16■□□□□ 0.5
PDCD6-213ENST00000618970 ACSBG1Q96GR2 724 aa18.16■□□□□ 0.5
PDCD6-213ENST00000618970 INSRP06213 1382 aa18.16■□□□□ 0.5
PDCD6-213ENST00000618970 IL2RBP14784 551 aa18.15■□□□□ 0.5
PDCD6-213ENST00000618970 PAPPAQ13219 1627 aa18.15■□□□□ 0.5
PDCD6-213ENST00000618970 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
PDCD6-213ENST00000618970 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.49
PDCD6-213ENST00000618970 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
PDCD6-213ENST00000618970 ZBTB7AO95365 584 aa18.13■□□□□ 0.49
PDCD6-213ENST00000618970 SLC15A2Q16348 729 aa18.11■□□□□ 0.49
PDCD6-213ENST00000618970 STK32BQ9NY57 414 aa18.11■□□□□ 0.49
PDCD6-213ENST00000618970 KAT6BQ8WYB5 2073 aa18.11■□□□□ 0.49
PDCD6-213ENST00000618970 PTGER2P43116 358 aa18.1■□□□□ 0.49
PDCD6-213ENST00000618970 EIF4A2Q14240 407 aaKnown RBP18.1■□□□□ 0.49
PDCD6-213ENST00000618970 LTV1Q96GA3 475 aaPredicted RBP18.1■□□□□ 0.49
PDCD6-213ENST00000618970 UTRNP46939 3433 aa18.1■□□□□ 0.49
PDCD6-213ENST00000618970 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
PDCD6-213ENST00000618970 MYBBP1AQ9BQG0 1328 aaKnown RBP18.09■□□□□ 0.49
PDCD6-213ENST00000618970 IL13P35225 146 aa18.09■□□□□ 0.49
PDCD6-213ENST00000618970 NBPF6Q5VWK0 638 aa18.08■□□□□ 0.48
PDCD6-213ENST00000618970 NBPF4Q96M43 638 aa18.08■□□□□ 0.48
PDCD6-213ENST00000618970 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
PDCD6-213ENST00000618970 NCAPD2Q15021 1401 aa18.07■□□□□ 0.48
PDCD6-213ENST00000618970 DOT1LQ8TEK3 1739 aa18.07■□□□□ 0.48
PDCD6-213ENST00000618970 YY1P25490 414 aa18.06■□□□□ 0.48
PDCD6-213ENST00000618970 EYA1Q99502 592 aa18.06■□□□□ 0.48
PDCD6-213ENST00000618970 ANP32CO43423 234 aa18.05■□□□□ 0.48
PDCD6-213ENST00000618970 DDX54Q8TDD1 881 aaKnown RBP18.05■□□□□ 0.48
PDCD6-213ENST00000618970 LRRC4BQ9NT99 713 aa18.05■□□□□ 0.48
PDCD6-213ENST00000618970 MEGF6O75095 1541 aa18.04■□□□□ 0.48
PDCD6-213ENST00000618970 ZNF827Q17R98 1081 aa18.04■□□□□ 0.48
PDCD6-213ENST00000618970 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
PDCD6-213ENST00000618970 DIEXFQ68CQ4 756 aaKnown RBP18.04■□□□□ 0.48
PDCD6-213ENST00000618970 DIAPH1O60610 1272 aaKnown RBP18.03■□□□□ 0.48
PDCD6-213ENST00000618970 SGIP1Q9BQI5 828 aa18.03■□□□□ 0.48
PDCD6-213ENST00000618970 MTFR1LQ9H019 292 aa18.03■□□□□ 0.48
PDCD6-213ENST00000618970 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.48
PDCD6-213ENST00000618970 IGSF1Q8N6C5 1336 aa18.02■□□□□ 0.48
PDCD6-213ENST00000618970 QSER1Q2KHR3 1735 aa18.02■□□□□ 0.48
PDCD6-213ENST00000618970 USHBP1Q8N6Y0 703 aa18.02■□□□□ 0.48
PDCD6-213ENST00000618970 LY75O60449 1722 aa18.01■□□□□ 0.47
PDCD6-213ENST00000618970 FHDC1Q9C0D6 1143 aaPredicted RBP18■□□□□ 0.47
PDCD6-213ENST00000618970 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
PDCD6-213ENST00000618970 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
PDCD6-213ENST00000618970 PRIM1P49642 420 aaKnown RBP17.98■□□□□ 0.47
PDCD6-213ENST00000618970 KCNQ4P56696 695 aa17.98■□□□□ 0.47
PDCD6-213ENST00000618970 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
PDCD6-213ENST00000618970 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
PDCD6-213ENST00000618970 SYTL4Q96C24 671 aaPredicted RBP17.98■□□□□ 0.47
PDCD6-213ENST00000618970 SYT17Q9BSW7 474 aa17.98■□□□□ 0.47
PDCD6-213ENST00000618970 KDRP35968 1356 aa17.98■□□□□ 0.47
PDCD6-213ENST00000618970 ZCRB1Q8TBF4 217 aaKnown RBP17.97■□□□□ 0.47
PDCD6-213ENST00000618970 COL24A1Q17RW2 1714 aa17.97■□□□□ 0.47
PDCD6-213ENST00000618970 GOLGB1Q14789 3259 aaKnown RBP17.96■□□□□ 0.47
PDCD6-213ENST00000618970 SLC27A3Q5K4L6 730 aa17.96■□□□□ 0.47
PDCD6-213ENST00000618970 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
PDCD6-213ENST00000618970 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
PDCD6-213ENST00000618970 ARXQ96QS3 562 aa17.95■□□□□ 0.46
PDCD6-213ENST00000618970 PNPLA7Q6ZV29 1317 aa17.95■□□□□ 0.46
PDCD6-213ENST00000618970 HMOX1P09601 288 aa17.94■□□□□ 0.46
PDCD6-213ENST00000618970 U2SURPO15042 1029 aaKnown RBP17.93■□□□□ 0.46
PDCD6-213ENST00000618970 MIER1Q8N108 512 aa17.93■□□□□ 0.46
PDCD6-213ENST00000618970 MAP3K5Q99683 1374 aa17.92■□□□□ 0.46
PDCD6-213ENST00000618970 RSPH6AQ9H0K4 717 aa17.92■□□□□ 0.46
PDCD6-213ENST00000618970 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
PDCD6-213ENST00000618970 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
PDCD6-213ENST00000618970 CHD4Q14839 1912 aa17.9■□□□□ 0.46
PDCD6-213ENST00000618970 TATP17735 454 aaPredicted RBP17.9■□□□□ 0.46
PDCD6-213ENST00000618970 PNISRQ8TF01 805 aaKnown RBP17.9■□□□□ 0.46
PDCD6-213ENST00000618970 RAPGEF4Q8WZA2 1011 aa17.9■□□□□ 0.46
PDCD6-213ENST00000618970 TFCP2L1Q9NZI6 479 aa17.9■□□□□ 0.46
PDCD6-213ENST00000618970 C5P01031 1676 aa17.9■□□□□ 0.46
PDCD6-213ENST00000618970 VIRMAQ69YN4 1812 aaKnown RBP17.89■□□□□ 0.45
PDCD6-213ENST00000618970 FCHSD2O94868 740 aa17.89■□□□□ 0.45
PDCD6-213ENST00000618970 U2AF1L5P0DN76 240 aaPredicted RBP17.89■□□□□ 0.45
PDCD6-213ENST00000618970 U2AF1Q01081 240 aaKnown RBP eCLIP17.89■□□□□ 0.45
PDCD6-213ENST00000618970 SLC16A10Q8TF71 515 aa17.89■□□□□ 0.45
PDCD6-213ENST00000618970 CCNL1Q9UK58 526 aaPredicted RBP17.89■□□□□ 0.45
PDCD6-213ENST00000618970 PLEKHG2Q9H7P9 1386 aa17.89■□□□□ 0.45
PDCD6-213ENST00000618970 CCER2I3L3R5 266 aa17.88■□□□□ 0.45
PDCD6-213ENST00000618970 PLEKHF1Q96S99 279 aa17.88■□□□□ 0.45
PDCD6-213ENST00000618970 MRS2Q9HD23 443 aa17.88■□□□□ 0.45
PDCD6-213ENST00000618970 ADAMTS8Q9UP79 889 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 262 ms