RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 SURF6O75683 361 aaKnown RBP13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 CEP131Q9UPN4 1083 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 TNNT1P13805 278 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 KIF6Q6ZMV9 814 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 NACAP1Q9BZK3 213 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 WASHC2AQ641Q2 1341 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
PCDHA4-204ENST00000618834 CAMK4Q16566 473 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 C6orf163Q5TEZ5 329 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 HOOK3Q86VS8 718 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 SRCIN1Q9C0H9 1055 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 C1orf115Q9H7X2 142 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 PDRG1Q9NUG6 133 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 DNAAF4Q8WXU2 420 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 UBE2Q2Q8WVN8 375 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 WASF1Q92558 559 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 ALS2CR12Q96Q35 445 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
PCDHA4-204ENST00000618834 SMARCC1Q92922 1105 aaPredicted RBP13.41□□□□□ -0.26
PCDHA4-204ENST00000618834 C16orf45Q96MC5 204 aaPredicted RBP13.41□□□□□ -0.26
PCDHA4-204ENST00000618834 LMAN1P49257 510 aa13.41□□□□□ -0.26
PCDHA4-204ENST00000618834 IRX3P78415 501 aaPredicted RBP13.41□□□□□ -0.26
PCDHA4-204ENST00000618834 DDX23Q9BUQ8 820 aaKnown RBP13.41□□□□□ -0.26
PCDHA4-204ENST00000618834 CEP112Q8N8E3 955 aa13.41□□□□□ -0.26
PCDHA4-204ENST00000618834 BBXQ8WY36 941 aaPredicted RBP13.41□□□□□ -0.26
PCDHA4-204ENST00000618834 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 NEMFO60524 1076 aa13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 IVLP07476 585 aa13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 ATP2B2Q01814 1243 aa13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 DAAM2Q86T65 1068 aa13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 TOP1P11387 765 aaKnown RBP13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 PDE3AQ14432 1141 aa13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 FKBP15Q5T1M5 1219 aa13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 KIF21BO75037 1637 aa13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 HSPA4P34932 840 aa13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 MCM5P33992 734 aa13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 CASTP20810 708 aaKnown RBP13.4□□□□□ -0.26
PCDHA4-204ENST00000618834 SEPT6Q14141 434 aa13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 CCDC158Q5M9N0 1113 aa13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 SSBP05455 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 PSME1Q06323 249 aa13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 DNAI2Q9GZS0 605 aa13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 MSL1Q68DK7 614 aa13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 NUP133Q8WUM0 1156 aa13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 NUP88Q99567 741 aaPredicted RBP13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 KIF4BQ2VIQ3 1234 aa13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 NAA15Q9BXJ9 866 aaKnown RBP13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 CCT4P50991 539 aaKnown RBP13.39□□□□□ -0.27
PCDHA4-204ENST00000618834 ANKS4BQ8N8V4 417 aa13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 MAATS1Q7Z4T9 603 aa13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 FGFR1OPO95684 399 aaKnown RBP13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 GSDMDP57764 484 aa13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 KRT32Q14532 448 aa13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 BLOC1S2Q6QNY1 142 aa13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 ANO10Q9NW15 660 aa13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 CTNNBL1Q8WYA6 563 aaPredicted RBP13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 URI1O94763 535 aaPredicted RBP13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 TSG101Q99816 390 aa13.38□□□□□ -0.27
PCDHA4-204ENST00000618834 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
PCDHA4-204ENST00000618834 WDR66Q8TBY9 1149 aa13.37□□□□□ -0.27
PCDHA4-204ENST00000618834 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
PCDHA4-204ENST00000618834 JAKMIP1Q96N16 626 aaKnown RBP13.37□□□□□ -0.27
PCDHA4-204ENST00000618834 MAP4K4O95819 1239 aaPredicted RBP13.37□□□□□ -0.27
PCDHA4-204ENST00000618834 CHD1LQ86WJ1 897 aa13.37□□□□□ -0.27
PCDHA4-204ENST00000618834 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
PCDHA4-204ENST00000618834 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 NSRP1Q9H0G5 558 aaKnown RBP13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 HLTFQ14527 1009 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 GOLGA6L9A6NEM1 432 aa13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 PAFAH1B1P43034 410 aa13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 GRIPAP1Q4V328 841 aa13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 STX1AQ16623 288 aa13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 FYCO1Q9BQS8 1478 aa13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 UBAC1Q9BSL1 405 aa13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 CLGNO14967 610 aa13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 PAXBP1Q9Y5B6 917 aa13.36□□□□□ -0.27
PCDHA4-204ENST00000618834 POLA1P09884 1462 aaPredicted RBP13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 PLEKHH2Q8IVE3 1493 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 FSD2A1L4K1 749 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 HSF2BPO75031 334 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 NAP1L3Q99457 506 aaPredicted RBP13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 CTAGE5O15320 804 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 FERP16591 822 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 ZSCAN25Q6NSZ9 544 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 ZMYND15Q9H091 742 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 CEP135Q66GS9 1140 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 PUS7Q96PZ0 661 aaKnown RBP13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 CNNM1Q9NRU3 951 aa13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 SNW1Q13573 536 aaKnown RBP13.35□□□□□ -0.27
PCDHA4-204ENST00000618834 LARP1Q6PKG0 1096 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms