RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 SHANK3Q9BYB0 1731 aa7.29□□□□□ -1.24
GTDC1-220ENST00000618778 HDGFL2Q7Z4V5 671 aaPredicted RBP7.29□□□□□ -1.24
GTDC1-220ENST00000618778 SBF2Q86WG5 1849 aa7.29□□□□□ -1.24
GTDC1-220ENST00000618778 NINLQ9Y2I6 1382 aa7.29□□□□□ -1.24
GTDC1-220ENST00000618778 UPF1Q92900 1129 aaKnown RBP eCLIP7.28□□□□□ -1.24
GTDC1-220ENST00000618778 GGNBP2Q9H3C7 697 aa7.28□□□□□ -1.24
GTDC1-220ENST00000618778 SPATA31A1Q5TZJ5 1347 aa7.28□□□□□ -1.24
GTDC1-220ENST00000618778 ARHGEF25Q86VW2 580 aa7.28□□□□□ -1.24
GTDC1-220ENST00000618778 SEPT12Q8IYM1 358 aa7.28□□□□□ -1.24
GTDC1-220ENST00000618778 A0A0G2JS52 829 aa7.27□□□□□ -1.25
GTDC1-220ENST00000618778 ABCC6O95255 1503 aa7.27□□□□□ -1.25
GTDC1-220ENST00000618778 KIF7Q2M1P5 1343 aa7.27□□□□□ -1.25
GTDC1-220ENST00000618778 AATKQ6ZMQ8 1374 aa7.27□□□□□ -1.25
GTDC1-220ENST00000618778 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
GTDC1-220ENST00000618778 TERF2IPQ9NYB0 399 aa7.27□□□□□ -1.25
GTDC1-220ENST00000618778 MAP3K13O43283 966 aa7.27□□□□□ -1.25
GTDC1-220ENST00000618778 RRS1Q15050 365 aaKnown RBP7.27□□□□□ -1.25
GTDC1-220ENST00000618778 PUS7Q96PZ0 661 aaKnown RBP7.27□□□□□ -1.25
GTDC1-220ENST00000618778 RGPD1P0DJD0 1748 aa7.26□□□□□ -1.25
GTDC1-220ENST00000618778 CRB1P82279 1406 aa7.26□□□□□ -1.25
GTDC1-220ENST00000618778 FYB1O15117 783 aa7.26□□□□□ -1.25
GTDC1-220ENST00000618778 SUPT16HQ9Y5B9 1047 aaKnown RBP7.26□□□□□ -1.25
GTDC1-220ENST00000618778 KLHL34Q8N239 644 aa7.26□□□□□ -1.25
GTDC1-220ENST00000618778 DISP2A7MBM2 1401 aa7.25□□□□□ -1.25
GTDC1-220ENST00000618778 MAP3K19Q56UN5 1328 aa7.25□□□□□ -1.25
GTDC1-220ENST00000618778 IFNLR1Q8IU57 520 aaPredicted RBP7.25□□□□□ -1.25
GTDC1-220ENST00000618778 ERBB3P21860 1342 aa7.25□□□□□ -1.25
GTDC1-220ENST00000618778 PRKRIP1Q9H875 184 aaPredicted RBP7.24□□□□□ -1.25
GTDC1-220ENST00000618778 WDR17Q8IZU2 1322 aa7.24□□□□□ -1.25
GTDC1-220ENST00000618778 ONECUT3O60422 494 aaPredicted RBP7.24□□□□□ -1.25
GTDC1-220ENST00000618778 CCDC184Q52MB2 194 aa7.24□□□□□ -1.25
GTDC1-220ENST00000618778 ASTLQ6HA08 431 aaPredicted RBP7.24□□□□□ -1.25
GTDC1-220ENST00000618778 KAT6BQ8WYB5 2073 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 EVA1CP58658 441 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 KRT27Q7Z3Y8 459 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 KCNH5Q8NCM2 988 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 LTV1Q96GA3 475 aaPredicted RBP7.23□□□□□ -1.25
GTDC1-220ENST00000618778 COG3Q96JB2 828 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 PANK3Q9H999 370 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 EMILIN1Q9Y6C2 1016 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 DOT1LQ8TEK3 1739 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 MEGF6O75095 1541 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 TOM1L2Q6ZVM7 507 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 SGIP1Q9BQI5 828 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 NUP188Q5SRE5 1749 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 RREB1Q92766 1687 aa7.23□□□□□ -1.25
GTDC1-220ENST00000618778 TOGARAM1Q9Y4F4 1720 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 ATMINO43313 823 aaPredicted RBP7.22□□□□□ -1.25
GTDC1-220ENST00000618778 HOXC9P31274 260 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 TNNT2P45379 298 aaPredicted RBP7.22□□□□□ -1.25
GTDC1-220ENST00000618778 LHX8Q68G74 356 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 DEFB132Q7Z7B7 95 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 TCP11L2Q8N4U5 519 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 USHBP1Q8N6Y0 703 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 ANKRD24Q8TF21 1146 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 BLMP54132 1417 aaPredicted RBP7.22□□□□□ -1.25
GTDC1-220ENST00000618778 CSB-PGBD3P0DP91 1061 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 CDCA8Q53HL2 280 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 DCAF8Q5TAQ9 597 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 PTF1AQ7RTS3 328 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 TRPC6Q9Y210 931 aa7.22□□□□□ -1.25
GTDC1-220ENST00000618778 TNS2Q63HR2 1409 aa7.21□□□□□ -1.25
GTDC1-220ENST00000618778 CNGB1Q14028 1251 aaPredicted RBP7.21□□□□□ -1.26
GTDC1-220ENST00000618778 BARGINQ6ZT62 677 aa7.21□□□□□ -1.26
GTDC1-220ENST00000618778 BTAF1O14981 1849 aa7.21□□□□□ -1.26
GTDC1-220ENST00000618778 NHSQ6T4R5 1651 aa7.21□□□□□ -1.26
GTDC1-220ENST00000618778 PKD1L3Q7Z443 1732 aa7.21□□□□□ -1.26
GTDC1-220ENST00000618778 HSP90AB2PQ58FF8 381 aa7.21□□□□□ -1.26
GTDC1-220ENST00000618778 PCDHB13Q9Y5F0 798 aa7.21□□□□□ -1.26
GTDC1-220ENST00000618778 VIRMAQ69YN4 1812 aaKnown RBP7.2□□□□□ -1.26
GTDC1-220ENST00000618778 RTL1A6NKG5 1358 aa7.2□□□□□ -1.26
GTDC1-220ENST00000618778 HNRNPUQ00839 825 aaKnown RBP eCLIP7.2□□□□□ -1.26
GTDC1-220ENST00000618778 IP6K1Q92551 441 aa7.2□□□□□ -1.26
GTDC1-220ENST00000618778 NLRP2Q9NX02 1062 aa7.2□□□□□ -1.26
GTDC1-220ENST00000618778 CGNL1Q0VF96 1302 aa7.2□□□□□ -1.26
GTDC1-220ENST00000618778 FLT4P35916 1363 aa7.19□□□□□ -1.26
GTDC1-220ENST00000618778 TRIM37O94972 964 aa7.19□□□□□ -1.26
GTDC1-220ENST00000618778 AMPHP49418 695 aa7.19□□□□□ -1.26
GTDC1-220ENST00000618778 MARCH10Q8NA82 808 aaPredicted RBP7.19□□□□□ -1.26
GTDC1-220ENST00000618778 CARD10Q9BWT7 1032 aa7.19□□□□□ -1.26
GTDC1-220ENST00000618778 BMP2KQ9NSY1 1161 aaPredicted RBP7.19□□□□□ -1.26
GTDC1-220ENST00000618778 SMG6Q86US8 1419 aaKnown RBP7.19□□□□□ -1.26
GTDC1-220ENST00000618778 PPM1GO15355 546 aaPredicted RBP7.18□□□□□ -1.26
GTDC1-220ENST00000618778 TIE1P35590 1138 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 IFNL1Q8IU54 200 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 MRS2Q9HD23 443 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 ITGB4P16144 1822 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 OVOS2A0A0G2JMS6 1433 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 ATN1P54259 1190 aaPredicted RBP7.18□□□□□ -1.26
GTDC1-220ENST00000618778 NBPF6Q5VWK0 638 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 SPOCK2Q92563 424 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 NBPF4Q96M43 638 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 POLKQ9UBT6 870 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 THRAP3Q9Y2W1 955 aaKnown RBP7.18□□□□□ -1.26
GTDC1-220ENST00000618778 RGPD3A6NKT7 1758 aaPredicted RBP7.18□□□□□ -1.26
GTDC1-220ENST00000618778 RGPD4Q7Z3J3 1758 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 TUBGCP6Q96RT7 1819 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 INSRP06213 1382 aa7.18□□□□□ -1.26
GTDC1-220ENST00000618778 NCAPD2Q15021 1401 aa7.17□□□□□ -1.26
GTDC1-220ENST00000618778 PER1O15534 1290 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms