RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 HMOX1P09601 288 aa21■□□□□ 0.95
MALAT1-213ENST00000618227 OVOS2A0A0G2JMS6 1433 aa21■□□□□ 0.95
MALAT1-213ENST00000618227 FAM98CQ17RN3 349 aaKnown RBP20.99■□□□□ 0.95
MALAT1-213ENST00000618227 PLEKHO1Q53GL0 409 aaPredicted RBP20.99■□□□□ 0.95
MALAT1-213ENST00000618227 RGPD2P0DJD1 1756 aa20.99■□□□□ 0.95
MALAT1-213ENST00000618227 NEFMP07197 916 aa20.98■□□□□ 0.95
MALAT1-213ENST00000618227 PLEKHF1Q96S99 279 aa20.98■□□□□ 0.95
MALAT1-213ENST00000618227 SPG7Q9UQ90 795 aa20.98■□□□□ 0.95
MALAT1-213ENST00000618227 EXOC5O00471 708 aa20.97■□□□□ 0.95
MALAT1-213ENST00000618227 PRKAR2BP31323 418 aa20.97■□□□□ 0.95
MALAT1-213ENST00000618227 ZCRB1Q8TBF4 217 aaKnown RBP20.97■□□□□ 0.95
MALAT1-213ENST00000618227 MEGF6O75095 1541 aa20.97■□□□□ 0.95
MALAT1-213ENST00000618227 RUNDC1Q96C34 613 aa20.96■□□□□ 0.95
MALAT1-213ENST00000618227 THSD7AQ9UPZ6 1657 aa20.96■□□□□ 0.95
MALAT1-213ENST00000618227 DDB1Q16531 1140 aa20.95■□□□□ 0.94
MALAT1-213ENST00000618227 SEPT12Q8IYM1 358 aa20.95■□□□□ 0.94
MALAT1-213ENST00000618227 NCBP3Q53F19 620 aaKnown RBP20.94■□□□□ 0.94
MALAT1-213ENST00000618227 GAS2L2Q8NHY3 880 aa20.94■□□□□ 0.94
MALAT1-213ENST00000618227 PARP4Q9UKK3 1724 aaKnown RBP20.94■□□□□ 0.94
MALAT1-213ENST00000618227 TNS2Q63HR2 1409 aa20.93■□□□□ 0.94
MALAT1-213ENST00000618227 FAM9BQ8IZU0 186 aa20.92■□□□□ 0.94
MALAT1-213ENST00000618227 PHACTR3Q96KR7 559 aa20.92■□□□□ 0.94
MALAT1-213ENST00000618227 PCDH11XQ9BZA7 1347 aa20.92■□□□□ 0.94
MALAT1-213ENST00000618227 PCDH11YQ9BZA8 1340 aa20.92■□□□□ 0.94
MALAT1-213ENST00000618227 MAPK8IP3Q9UPT6 1336 aa20.92■□□□□ 0.94
MALAT1-213ENST00000618227 WNK3Q9BYP7 1800 aa20.92■□□□□ 0.94
MALAT1-213ENST00000618227 NGEFQ8N5V2 710 aa20.91■□□□□ 0.94
MALAT1-213ENST00000618227 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
MALAT1-213ENST00000618227 HTATSF1O43719 755 aaKnown RBP20.89■□□□□ 0.93
MALAT1-213ENST00000618227 HSP90AB1P08238 724 aaKnown RBP20.89■□□□□ 0.93
MALAT1-213ENST00000618227 PDE3BQ13370 1112 aa20.89■□□□□ 0.93
MALAT1-213ENST00000618227 NKX1-1Q15270 411 aaPredicted RBP20.89■□□□□ 0.93
MALAT1-213ENST00000618227 MTHFSDQ2M296 383 aaKnown RBP20.89■□□□□ 0.93
MALAT1-213ENST00000618227 IFNL2Q8IZJ0 200 aa20.89■□□□□ 0.93
MALAT1-213ENST00000618227 BCL9O00512 1426 aa20.88■□□□□ 0.93
MALAT1-213ENST00000618227 A0A0G2JS52 829 aa20.88■□□□□ 0.93
MALAT1-213ENST00000618227 MYT1Q01538 1121 aa20.88■□□□□ 0.93
MALAT1-213ENST00000618227 NFE2L2Q16236 605 aa20.88■□□□□ 0.93
MALAT1-213ENST00000618227 AKAP4Q5JQC9 854 aa20.88■□□□□ 0.93
MALAT1-213ENST00000618227 CYP27B1O15528 508 aa20.87■□□□□ 0.93
MALAT1-213ENST00000618227 PHKG2P15735 406 aa20.87■□□□□ 0.93
MALAT1-213ENST00000618227 C1orf141Q5JVX7 400 aa20.87■□□□□ 0.93
MALAT1-213ENST00000618227 ZNF530Q6P9A1 599 aaPredicted RBP20.87■□□□□ 0.93
MALAT1-213ENST00000618227 RGS12O14924 1447 aa20.87■□□□□ 0.93
MALAT1-213ENST00000618227 LRRC37A3O60309 1634 aa20.86■□□□□ 0.93
MALAT1-213ENST00000618227 KRT27Q7Z3Y8 459 aa20.86■□□□□ 0.93
MALAT1-213ENST00000618227 TMPOP42166 694 aaKnown RBP20.85■□□□□ 0.93
MALAT1-213ENST00000618227 CCDC146Q8IYE0 955 aa20.85■□□□□ 0.93
MALAT1-213ENST00000618227 MARCH10Q8NA82 808 aaPredicted RBP20.85■□□□□ 0.93
MALAT1-213ENST00000618227 GNAT3A8MTJ3 354 aa20.84■□□□□ 0.93
MALAT1-213ENST00000618227 LMOD3Q0VAK6 560 aa20.84■□□□□ 0.93
MALAT1-213ENST00000618227 DDX54Q8TDD1 881 aaKnown RBP20.84■□□□□ 0.93
MALAT1-213ENST00000618227 DCAF5Q96JK2 942 aa20.84■□□□□ 0.93
MALAT1-213ENST00000618227 MAP3K5Q99683 1374 aa20.83■□□□□ 0.92
MALAT1-213ENST00000618227 APAF1O14727 1248 aa20.82■□□□□ 0.92
MALAT1-213ENST00000618227 CCDC27Q2M243 656 aa20.82■□□□□ 0.92
MALAT1-213ENST00000618227 FAM196AQ6ZSG2 479 aa20.81■□□□□ 0.92
MALAT1-213ENST00000618227 RIPK4P57078 832 aa20.8■□□□□ 0.92
MALAT1-213ENST00000618227 RTF1Q92541 710 aaKnown RBP20.8■□□□□ 0.92
MALAT1-213ENST00000618227 SHANK3Q9BYB0 1731 aa20.79■□□□□ 0.92
MALAT1-213ENST00000618227 ERVV-2B6SEH9 535 aa20.79■□□□□ 0.92
MALAT1-213ENST00000618227 CEMIPQ8WUJ3 1361 aa20.78■□□□□ 0.92
MALAT1-213ENST00000618227 RNMTO43148 476 aaKnown RBP20.76■□□□□ 0.91
MALAT1-213ENST00000618227 IL17REQ8NFR9 667 aa20.76■□□□□ 0.91
MALAT1-213ENST00000618227 TRIM35Q9UPQ4 493 aa20.76■□□□□ 0.91
MALAT1-213ENST00000618227 ADAMTS7Q9UKP4 1686 aa20.75■□□□□ 0.91
MALAT1-213ENST00000618227 MPRIPQ6WCQ1 1025 aa20.75■□□□□ 0.91
MALAT1-213ENST00000618227 BRWD3Q6RI45 1802 aa20.74■□□□□ 0.91
MALAT1-213ENST00000618227 KDM6AO15550 1401 aaPredicted RBP20.74■□□□□ 0.91
MALAT1-213ENST00000618227 CALD1Q05682 793 aaKnown RBP20.74■□□□□ 0.91
MALAT1-213ENST00000618227 LGR6Q9HBX8 967 aa20.73■□□□□ 0.91
MALAT1-213ENST00000618227 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
MALAT1-213ENST00000618227 NEUROD2Q15784 382 aa20.72■□□□□ 0.91
MALAT1-213ENST00000618227 BABAM1Q9NWV8 329 aa20.72■□□□□ 0.91
MALAT1-213ENST00000618227 WDR63Q8IWG1 891 aa20.71■□□□□ 0.91
MALAT1-213ENST00000618227 WWC1Q8IX03 1113 aa20.71■□□□□ 0.91
MALAT1-213ENST00000618227 SLC52A2Q9HAB3 445 aa20.71■□□□□ 0.91
MALAT1-213ENST00000618227 MRC1P22897 1456 aa20.7■□□□□ 0.9
MALAT1-213ENST00000618227 CABP4P57796 275 aa20.7■□□□□ 0.9
MALAT1-213ENST00000618227 TEFQ10587 303 aa20.7■□□□□ 0.9
MALAT1-213ENST00000618227 MCM10Q7L590 875 aa20.7■□□□□ 0.9
MALAT1-213ENST00000618227 BCL11BQ9C0K0 894 aaPredicted RBP20.7■□□□□ 0.9
MALAT1-213ENST00000618227 PRIM1P49642 420 aaKnown RBP20.69■□□□□ 0.9
MALAT1-213ENST00000618227 TAF7Q15545 349 aaPredicted RBP20.69■□□□□ 0.9
MALAT1-213ENST00000618227 IL16Q14005 1332 aa20.69■□□□□ 0.9
MALAT1-213ENST00000618227 SCN11AQ9UI33 1791 aa20.68■□□□□ 0.9
MALAT1-213ENST00000618227 FAM182BQ5T319 152 aa20.68■□□□□ 0.9
MALAT1-213ENST00000618227 TMOD3Q9NYL9 352 aa20.68■□□□□ 0.9
MALAT1-213ENST00000618227 ZNF521Q96K83 1311 aa20.68■□□□□ 0.9
MALAT1-213ENST00000618227 DLG5Q8TDM6 1919 aa20.67■□□□□ 0.9
MALAT1-213ENST00000618227 DCTN1Q14203 1278 aa20.67■□□□□ 0.9
MALAT1-213ENST00000618227 CCDC125Q86Z20 511 aa20.67■□□□□ 0.9
MALAT1-213ENST00000618227 NFATC2IPQ8NCF5 419 aa20.67■□□□□ 0.9
MALAT1-213ENST00000618227 PIGBQ92521 554 aa20.66■□□□□ 0.9
MALAT1-213ENST00000618227 HNRNPUQ00839 825 aaKnown RBP eCLIP20.65■□□□□ 0.9
MALAT1-213ENST00000618227 KCNQ2O43526 872 aa20.64■□□□□ 0.89
MALAT1-213ENST00000618227 SMARCC1Q92922 1105 aaPredicted RBP20.64■□□□□ 0.89
MALAT1-213ENST00000618227 ACSBG1Q96GR2 724 aa20.64■□□□□ 0.89
MALAT1-213ENST00000618227 CFAP44Q96MT7 982 aa20.64■□□□□ 0.89
MALAT1-213ENST00000618227 IFT57Q9NWB7 429 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms