RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, human

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-223	ENST00000618001	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.42	□□□□□ -0.58
TGIF1-223	ENST00000618001	MTFR1L	Q9H019	292 aa		11.42	□□□□□ -0.58
TGIF1-223	ENST00000618001	CGNL1	Q0VF96	1302 aa		11.42	□□□□□ -0.58
TGIF1-223	ENST00000618001	NSD2	O96028	1365 aa		11.42	□□□□□ -0.58
TGIF1-223	ENST00000618001	FYB1	O15117	783 aa		11.41	□□□□□ -0.58
TGIF1-223	ENST00000618001	ACSBG1	Q96GR2	724 aa		11.41	□□□□□ -0.58
TGIF1-223	ENST00000618001	NCAPD2	Q15021	1401 aa		11.41	□□□□□ -0.58
TGIF1-223	ENST00000618001	SMG6	Q86US8	1419 aa	Known RBP	11.41	□□□□□ -0.58
TGIF1-223	ENST00000618001	INSR	P06213	1382 aa		11.4	□□□□□ -0.58
TGIF1-223	ENST00000618001	AKT1S1	Q96B36	256 aa		11.4	□□□□□ -0.58
TGIF1-223	ENST00000618001	ZBTB7A	O95365	584 aa		11.4	□□□□□ -0.58
TGIF1-223	ENST00000618001	AMPH	P49418	695 aa		11.4	□□□□□ -0.58
TGIF1-223	ENST00000618001	TUBGCP6	Q96RT7	1819 aa		11.39	□□□□□ -0.59
TGIF1-223	ENST00000618001	LRRC4B	Q9NT99	713 aa		11.39	□□□□□ -0.59
TGIF1-223	ENST00000618001	PKD1L3	Q7Z443	1732 aa		11.39	□□□□□ -0.59
TGIF1-223	ENST00000618001	FLT4	P35916	1363 aa		11.39	□□□□□ -0.59
TGIF1-223	ENST00000618001	ZNF827	Q17R98	1081 aa		11.38	□□□□□ -0.59
TGIF1-223	ENST00000618001	DCAF8L1	A6NGE4	600 aa		11.38	□□□□□ -0.59
TGIF1-223	ENST00000618001	ZCRB1	Q8TBF4	217 aa	Known RBP	11.38	□□□□□ -0.59
TGIF1-223	ENST00000618001	YY1	P25490	414 aa		11.37	□□□□□ -0.59
TGIF1-223	ENST00000618001	SLC16A10	Q8TF71	515 aa		11.37	□□□□□ -0.59
TGIF1-223	ENST00000618001	LTV1	Q96GA3	475 aa	Predicted RBP	11.37	□□□□□ -0.59
TGIF1-223	ENST00000618001	NBPF6	Q5VWK0	638 aa		11.37	□□□□□ -0.59
TGIF1-223	ENST00000618001	DDX54	Q8TDD1	881 aa	Known RBP	11.37	□□□□□ -0.59
TGIF1-223	ENST00000618001	NBPF4	Q96M43	638 aa		11.37	□□□□□ -0.59
TGIF1-223	ENST00000618001	GGNBP2	Q9H3C7	697 aa		11.37	□□□□□ -0.59
TGIF1-223	ENST00000618001	PLEKHG2	Q9H7P9	1386 aa		11.37	□□□□□ -0.59
TGIF1-223	ENST00000618001	RRS1	Q15050	365 aa	Known RBP	11.36	□□□□□ -0.59
TGIF1-223	ENST00000618001	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.36	□□□□□ -0.59
TGIF1-223	ENST00000618001	FBLN1	P23142	703 aa		11.36	□□□□□ -0.59
TGIF1-223	ENST00000618001	NSD3	Q9BZ95	1437 aa		11.36	□□□□□ -0.59
TGIF1-223	ENST00000618001	C5	P01031	1676 aa		11.35	□□□□□ -0.59
TGIF1-223	ENST00000618001	PRIM1	P49642	420 aa	Known RBP	11.35	□□□□□ -0.59
TGIF1-223	ENST00000618001	SYT17	Q9BSW7	474 aa		11.35	□□□□□ -0.59
TGIF1-223	ENST00000618001	CARD14	Q9BXL6	1004 aa		11.35	□□□□□ -0.59
TGIF1-223	ENST00000618001	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.35	□□□□□ -0.59
TGIF1-223	ENST00000618001	TOGARAM1	Q9Y4F4	1720 aa		11.35	□□□□□ -0.59
TGIF1-223	ENST00000618001	PNPLA7	Q6ZV29	1317 aa		11.34	□□□□□ -0.59
TGIF1-223	ENST00000618001	PCDH11X	Q9BZA7	1347 aa		11.34	□□□□□ -0.59
TGIF1-223	ENST00000618001	PCDH11Y	Q9BZA8	1340 aa		11.34	□□□□□ -0.59
TGIF1-223	ENST00000618001	HMGB2	P26583	209 aa	Known RBP	11.34	□□□□□ -0.59
TGIF1-223	ENST00000618001	ARX	Q96QS3	562 aa		11.34	□□□□□ -0.59
TGIF1-223	ENST00000618001	RAPGEF4	Q8WZA2	1011 aa		11.34	□□□□□ -0.59
TGIF1-223	ENST00000618001	TAT	P17735	454 aa	Predicted RBP	11.33	□□□□□ -0.6
TGIF1-223	ENST00000618001	HSP90AB2P	Q58FF8	381 aa		11.33	□□□□□ -0.6
TGIF1-223	ENST00000618001	TAF1L	Q8IZX4	1826 aa		11.32	□□□□□ -0.6
TGIF1-223	ENST00000618001	UBE2Q2	Q8WVN8	375 aa		11.32	□□□□□ -0.6
TGIF1-223	ENST00000618001	WASHC2A	Q641Q2	1341 aa		11.32	□□□□□ -0.6
TGIF1-223	ENST00000618001	NKX1-1	Q15270	411 aa	Predicted RBP	11.31	□□□□□ -0.6
TGIF1-223	ENST00000618001	USHBP1	Q8N6Y0	703 aa		11.31	□□□□□ -0.6
TGIF1-223	ENST00000618001	SYTL4	Q96C24	671 aa	Predicted RBP	11.31	□□□□□ -0.6
TGIF1-223	ENST00000618001	CCNL1	Q9UK58	526 aa	Predicted RBP	11.31	□□□□□ -0.6
TGIF1-223	ENST00000618001	ITGB4	P16144	1822 aa		11.31	□□□□□ -0.6
TGIF1-223	ENST00000618001	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
TGIF1-223	ENST00000618001	TFCP2L1	Q9NZI6	479 aa		11.3	□□□□□ -0.6
TGIF1-223	ENST00000618001	CYP27B1	O15528	508 aa		11.3	□□□□□ -0.6
TGIF1-223	ENST00000618001	POLD1	P28340	1107 aa		11.3	□□□□□ -0.6
TGIF1-223	ENST00000618001	EMILIN1	Q9Y6C2	1016 aa		11.3	□□□□□ -0.6
TGIF1-223	ENST00000618001	CHD4	Q14839	1912 aa		11.3	□□□□□ -0.6
TGIF1-223	ENST00000618001	C4B	P0C0L5	1744 aa		11.29	□□□□□ -0.6
TGIF1-223	ENST00000618001	MAP2	P11137	1827 aa	Known RBP	11.29	□□□□□ -0.6
TGIF1-223	ENST00000618001	PALLD	Q8WX93	1383 aa		11.29	□□□□□ -0.6
TGIF1-223	ENST00000618001	ZNF831	Q5JPB2	1677 aa		11.29	□□□□□ -0.6
TGIF1-223	ENST00000618001	ERICH6B	Q5W0A0	696 aa		11.28	□□□□□ -0.6
TGIF1-223	ENST00000618001	UTRN	P46939	3433 aa		11.28	□□□□□ -0.6
TGIF1-223	ENST00000618001	FLAD1	Q8NFF5	587 aa		11.27	□□□□□ -0.61
TGIF1-223	ENST00000618001	SMARCC1	Q92922	1105 aa	Predicted RBP	11.27	□□□□□ -0.61
TGIF1-223	ENST00000618001	KCNQ4	P56696	695 aa		11.27	□□□□□ -0.61
TGIF1-223	ENST00000618001	POLK	Q9UBT6	870 aa		11.27	□□□□□ -0.61
TGIF1-223	ENST00000618001	SPG7	Q9UQ90	795 aa		11.27	□□□□□ -0.61
TGIF1-223	ENST00000618001	UBR3	Q6ZT12	1888 aa		11.26	□□□□□ -0.61
TGIF1-223	ENST00000618001	COL23A1	Q86Y22	540 aa	Predicted RBP	11.26	□□□□□ -0.61
TGIF1-223	ENST00000618001	EYA1	Q99502	592 aa		11.25	□□□□□ -0.61
TGIF1-223	ENST00000618001	KAT6B	Q8WYB5	2073 aa		11.25	□□□□□ -0.61
TGIF1-223	ENST00000618001	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.25	□□□□□ -0.61
TGIF1-223	ENST00000618001	IGSF1	Q8N6C5	1336 aa		11.24	□□□□□ -0.61
TGIF1-223	ENST00000618001	EIF5B	O60841	1220 aa	Known RBP	11.24	□□□□□ -0.61
TGIF1-223	ENST00000618001	PIGB	Q92521	554 aa		11.24	□□□□□ -0.61
TGIF1-223	ENST00000618001	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
TGIF1-223	ENST00000618001	MPRIP	Q6WCQ1	1025 aa		11.23	□□□□□ -0.61
TGIF1-223	ENST00000618001	CIC	Q96RK0	1608 aa	Predicted RBP	11.23	□□□□□ -0.61
TGIF1-223	ENST00000618001	PHKG2	P15735	406 aa		11.23	□□□□□ -0.61
TGIF1-223	ENST00000618001	EIF4A2	Q14240	407 aa	Known RBP	11.23	□□□□□ -0.61
TGIF1-223	ENST00000618001	KDR	P35968	1356 aa		11.22	□□□□□ -0.61
TGIF1-223	ENST00000618001	IFNL2	Q8IZJ0	200 aa		11.22	□□□□□ -0.61
TGIF1-223	ENST00000618001	CD2AP	Q9Y5K6	639 aa		11.22	□□□□□ -0.61
TGIF1-223	ENST00000618001	HSPA5	P11021	654 aa	Known RBP	11.22	□□□□□ -0.61
TGIF1-223	ENST00000618001	NLGN2	Q8NFZ4	835 aa		11.22	□□□□□ -0.61
TGIF1-223	ENST00000618001	COL5A3	P25940	1745 aa	Predicted RBP	11.21	□□□□□ -0.61
TGIF1-223	ENST00000618001	PPM1G	O15355	546 aa	Predicted RBP	11.21	□□□□□ -0.61
TGIF1-223	ENST00000618001	SSFA2	P28290	1259 aa		11.21	□□□□□ -0.61
TGIF1-223	ENST00000618001	GPR162	Q16538	588 aa		11.21	□□□□□ -0.61
TGIF1-223	ENST00000618001	LOC102724428	A0A0B4J2F2	783 aa		11.2	□□□□□ -0.62
TGIF1-223	ENST00000618001	SIK1	P57059	783 aa		11.2	□□□□□ -0.62
TGIF1-223	ENST00000618001	AK7	Q96M32	723 aa		11.2	□□□□□ -0.62
TGIF1-223	ENST00000618001	TMOD3	Q9NYL9	352 aa		11.2	□□□□□ -0.62
TGIF1-223	ENST00000618001	GRIN3B	O60391	1043 aa		11.2	□□□□□ -0.62
TGIF1-223	ENST00000618001	PANK3	Q9H999	370 aa		11.19	□□□□□ -0.62
TGIF1-223	ENST00000618001	ERVV-2	B6SEH9	535 aa		11.19	□□□□□ -0.62
TGIF1-223	ENST00000618001	AMIGO3	Q86WK7	504 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 80 ms