RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 RSPH6AQ9H0K4 717 aa26.8■■□□□ 1.88
SDHA-220ENST00000617470 TRPC5Q9UL62 973 aaPredicted RBP26.8■■□□□ 1.88
SDHA-220ENST00000617470 SPATA31A1Q5TZJ5 1347 aa26.8■■□□□ 1.88
SDHA-220ENST00000617470 QTRT2Q9H974 415 aaKnown RBP26.8■■□□□ 1.88
SDHA-220ENST00000617470 RRP1P56182 461 aaKnown RBP26.79■■□□□ 1.88
SDHA-220ENST00000617470 ZNF772Q68DY9 489 aaPredicted RBP26.79■■□□□ 1.88
SDHA-220ENST00000617470 WWC1Q8IX03 1113 aa26.79■■□□□ 1.88
SDHA-220ENST00000617470 RAPGEF4Q8WZA2 1011 aa26.79■■□□□ 1.88
SDHA-220ENST00000617470 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.79■■□□□ 1.88
SDHA-220ENST00000617470 PLEKHF1Q96S99 279 aa26.78■■□□□ 1.88
SDHA-220ENST00000617470 PPP4R2Q9NY27 417 aa26.78■■□□□ 1.88
SDHA-220ENST00000617470 KDRP35968 1356 aa26.78■■□□□ 1.88
SDHA-220ENST00000617470 PNNQ9H307 717 aaKnown RBP26.78■■□□□ 1.88
SDHA-220ENST00000617470 RRP7AQ9Y3A4 280 aaKnown RBP26.78■■□□□ 1.88
SDHA-220ENST00000617470 NEFMP07197 916 aa26.77■■□□□ 1.88
SDHA-220ENST00000617470 NCAPD2Q15021 1401 aa26.76■■□□□ 1.87
SDHA-220ENST00000617470 TATP17735 454 aaPredicted RBP26.75■■□□□ 1.87
SDHA-220ENST00000617470 ATRNO75882 1429 aa26.75■■□□□ 1.87
SDHA-220ENST00000617470 MAPK8IP3Q9UPT6 1336 aa26.75■■□□□ 1.87
SDHA-220ENST00000617470 IL2RBP14784 551 aa26.75■■□□□ 1.87
SDHA-220ENST00000617470 GJD4Q96KN9 370 aaPredicted RBP26.75■■□□□ 1.87
SDHA-220ENST00000617470 THRAP3Q9Y2W1 955 aaKnown RBP26.74■■□□□ 1.87
SDHA-220ENST00000617470 NEUROD2Q15784 382 aa26.73■■□□□ 1.87
SDHA-220ENST00000617470 FAM98CQ17RN3 349 aaKnown RBP26.73■■□□□ 1.87
SDHA-220ENST00000617470 NCBP3Q53F19 620 aaKnown RBP26.73■■□□□ 1.87
SDHA-220ENST00000617470 E9PSI1 815 aa26.73■■□□□ 1.87
SDHA-220ENST00000617470 PHACTR3Q96KR7 559 aa26.73■■□□□ 1.87
SDHA-220ENST00000617470 MEGF6O75095 1541 aa26.72■■□□□ 1.87
SDHA-220ENST00000617470 A0A0G2JS52 829 aa26.72■■□□□ 1.87
SDHA-220ENST00000617470 MYT1Q01538 1121 aa26.72■■□□□ 1.87
SDHA-220ENST00000617470 CCDC27Q2M243 656 aa26.72■■□□□ 1.87
SDHA-220ENST00000617470 RGS17Q9UGC6 210 aaPredicted RBP26.69■■□□□ 1.86
SDHA-220ENST00000617470 BARGINQ6ZT62 677 aa26.68■■□□□ 1.86
SDHA-220ENST00000617470 PLEKHO1Q53GL0 409 aaPredicted RBP26.67■■□□□ 1.86
SDHA-220ENST00000617470 GLI3P10071 1580 aa26.67■■□□□ 1.86
SDHA-220ENST00000617470 WDR63Q8IWG1 891 aa26.66■■□□□ 1.86
SDHA-220ENST00000617470 CDCA7Q9BWT1 371 aaPredicted RBP26.66■■□□□ 1.86
SDHA-220ENST00000617470 OVOS2A0A0G2JMS6 1433 aa26.66■■□□□ 1.86
SDHA-220ENST00000617470 MTHFSDQ2M296 383 aaKnown RBP26.66■■□□□ 1.86
SDHA-220ENST00000617470 DISP2A7MBM2 1401 aa26.65■■□□□ 1.86
SDHA-220ENST00000617470 PARP4Q9UKK3 1724 aaKnown RBP26.65■■□□□ 1.86
SDHA-220ENST00000617470 TMPOP42166 694 aaKnown RBP26.65■■□□□ 1.86
SDHA-220ENST00000617470 AMOTQ4VCS5 1084 aa26.65■■□□□ 1.86
SDHA-220ENST00000617470 B4GALNT3Q6L9W6 998 aa26.65■■□□□ 1.86
SDHA-220ENST00000617470 ZCRB1Q8TBF4 217 aaKnown RBP26.65■■□□□ 1.86
SDHA-220ENST00000617470 SPG7Q9UQ90 795 aa26.65■■□□□ 1.86
SDHA-220ENST00000617470 RBM6P78332 1123 aaKnown RBP26.64■■□□□ 1.86
SDHA-220ENST00000617470 PELP1Q8IZL8 1130 aaKnown RBP26.64■■□□□ 1.86
SDHA-220ENST00000617470 PLIN1O60240 522 aa26.64■■□□□ 1.85
SDHA-220ENST00000617470 ZNF530Q6P9A1 599 aaPredicted RBP26.63■■□□□ 1.85
SDHA-220ENST00000617470 POTEAQ6S8J7 498 aa26.63■■□□□ 1.85
SDHA-220ENST00000617470 EXOC5O00471 708 aa26.62■■□□□ 1.85
SDHA-220ENST00000617470 RXRBP28702 533 aa26.62■■□□□ 1.85
SDHA-220ENST00000617470 DDB1Q16531 1140 aa26.62■■□□□ 1.85
SDHA-220ENST00000617470 GAS2L2Q8NHY3 880 aa26.62■■□□□ 1.85
SDHA-220ENST00000617470 WNK3Q9BYP7 1800 aa26.62■■□□□ 1.85
SDHA-220ENST00000617470 DDX54Q8TDD1 881 aaKnown RBP26.62■■□□□ 1.85
SDHA-220ENST00000617470 TRIM35Q9UPQ4 493 aa26.62■■□□□ 1.85
SDHA-220ENST00000617470 NFE2L2Q16236 605 aa26.61■■□□□ 1.85
SDHA-220ENST00000617470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.6■■□□□ 1.85
SDHA-220ENST00000617470 RIPK4P57078 832 aa26.59■■□□□ 1.85
SDHA-220ENST00000617470 C1orf141Q5JVX7 400 aa26.59■■□□□ 1.85
SDHA-220ENST00000617470 EXOC6Q8TAG9 804 aa26.59■■□□□ 1.85
SDHA-220ENST00000617470 SEPT12Q8IYM1 358 aa26.58■■□□□ 1.85
SDHA-220ENST00000617470 PCDH11XQ9BZA7 1347 aa26.58■■□□□ 1.84
SDHA-220ENST00000617470 PCDH11YQ9BZA8 1340 aa26.58■■□□□ 1.84
SDHA-220ENST00000617470 PLEKHG2Q9H7P9 1386 aa26.57■■□□□ 1.84
SDHA-220ENST00000617470 ONECUT3O60422 494 aaPredicted RBP26.56■■□□□ 1.84
SDHA-220ENST00000617470 TNS2Q63HR2 1409 aa26.56■■□□□ 1.84
SDHA-220ENST00000617470 PKD1L3Q7Z443 1732 aa26.56■■□□□ 1.84
SDHA-220ENST00000617470 CYP27B1O15528 508 aa26.55■■□□□ 1.84
SDHA-220ENST00000617470 IFNL2Q8IZJ0 200 aa26.55■■□□□ 1.84
SDHA-220ENST00000617470 AKAP4Q5JQC9 854 aa26.55■■□□□ 1.84
SDHA-220ENST00000617470 LRRC37A3O60309 1634 aa26.54■■□□□ 1.84
SDHA-220ENST00000617470 THSD7AQ9UPZ6 1657 aa26.54■■□□□ 1.84
SDHA-220ENST00000617470 GNAT3A8MTJ3 354 aa26.54■■□□□ 1.84
SDHA-220ENST00000617470 PHKG2P15735 406 aa26.54■■□□□ 1.84
SDHA-220ENST00000617470 C20orf194Q5TEA3 1177 aa26.54■■□□□ 1.84
SDHA-220ENST00000617470 RTF1Q92541 710 aaKnown RBP26.53■■□□□ 1.84
SDHA-220ENST00000617470 MAP3K5Q99683 1374 aa26.53■■□□□ 1.84
SDHA-220ENST00000617470 MPRIPQ6WCQ1 1025 aa26.51■■□□□ 1.83
SDHA-220ENST00000617470 BCAR3O75815 825 aa26.51■■□□□ 1.83
SDHA-220ENST00000617470 LMOD3Q0VAK6 560 aa26.5■■□□□ 1.83
SDHA-220ENST00000617470 DCTN1Q14203 1278 aa26.5■■□□□ 1.83
SDHA-220ENST00000617470 SHANK3Q9BYB0 1731 aa26.5■■□□□ 1.83
SDHA-220ENST00000617470 MCM10Q7L590 875 aa26.49■■□□□ 1.83
SDHA-220ENST00000617470 MARCH10Q8NA82 808 aaPredicted RBP26.49■■□□□ 1.83
SDHA-220ENST00000617470 CRBNQ96SW2 442 aa26.49■■□□□ 1.83
SDHA-220ENST00000617470 DLG5Q8TDM6 1919 aa26.49■■□□□ 1.83
SDHA-220ENST00000617470 CCDC136Q96JN2 1154 aa26.48■■□□□ 1.83
SDHA-220ENST00000617470 MYH16Q9H6N6 1097 aa26.48■■□□□ 1.83
SDHA-220ENST00000617470 IL16Q14005 1332 aa26.48■■□□□ 1.83
SDHA-220ENST00000617470 HSP90AB1P08238 724 aaKnown RBP26.47■■□□□ 1.83
SDHA-220ENST00000617470 FAM182BQ5T319 152 aa26.47■■□□□ 1.83
SDHA-220ENST00000617470 THUMPD2Q9BTF0 503 aaKnown RBP26.47■■□□□ 1.83
SDHA-220ENST00000617470 TSHZ2Q9NRE2 1034 aa26.47■■□□□ 1.83
SDHA-220ENST00000617470 FANCIQ9NVI1 1328 aa26.46■■□□□ 1.83
SDHA-220ENST00000617470 LGR6Q9HBX8 967 aa26.46■■□□□ 1.83
SDHA-220ENST00000617470 RGS12O14924 1447 aa26.45■■□□□ 1.83
SDHA-220ENST00000617470 HTATSF1O43719 755 aaKnown RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms