RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 CANXP27824 592 aaKnown RBP26.56■■□□□ 1.84
CNTNAP3B-212ENST00000617422 GAS2L2Q8NHY3 880 aa26.56■■□□□ 1.84
CNTNAP3B-212ENST00000617422 SMC4Q9NTJ3 1288 aa26.56■■□□□ 1.84
CNTNAP3B-212ENST00000617422 SOS2Q07890 1332 aaPredicted RBP26.55■■□□□ 1.84
CNTNAP3B-212ENST00000617422 C8orf58Q8NAV2 365 aa26.55■■□□□ 1.84
CNTNAP3B-212ENST00000617422 NCAPD2Q15021 1401 aa26.55■■□□□ 1.84
CNTNAP3B-212ENST00000617422 VAMP4O75379 141 aa26.54■■□□□ 1.84
CNTNAP3B-212ENST00000617422 CAMTA1Q9Y6Y1 1673 aa26.53■■□□□ 1.84
CNTNAP3B-212ENST00000617422 ELL2O00472 640 aaPredicted RBP26.53■■□□□ 1.84
CNTNAP3B-212ENST00000617422 CHL1O00533 1208 aa26.53■■□□□ 1.84
CNTNAP3B-212ENST00000617422 COG6Q9Y2V7 657 aa26.53■■□□□ 1.84
CNTNAP3B-212ENST00000617422 LRRC37A3O60309 1634 aa26.52■■□□□ 1.84
CNTNAP3B-212ENST00000617422 KRT24Q2M2I5 525 aa26.51■■□□□ 1.83
CNTNAP3B-212ENST00000617422 CLUAP1Q96AJ1 413 aa26.51■■□□□ 1.83
CNTNAP3B-212ENST00000617422 ERBB3P21860 1342 aa26.51■■□□□ 1.83
CNTNAP3B-212ENST00000617422 MIS18AQ9NYP9 233 aa26.5■■□□□ 1.83
CNTNAP3B-212ENST00000617422 GNAT3A8MTJ3 354 aa26.49■■□□□ 1.83
CNTNAP3B-212ENST00000617422 CHRNA2Q15822 529 aa26.49■■□□□ 1.83
CNTNAP3B-212ENST00000617422 RTF1Q92541 710 aaKnown RBP26.49■■□□□ 1.83
CNTNAP3B-212ENST00000617422 NHSL1Q5SYE7 1610 aa26.49■■□□□ 1.83
CNTNAP3B-212ENST00000617422 LMO7Q8WWI1 1683 aa26.49■■□□□ 1.83
CNTNAP3B-212ENST00000617422 TWISTNBQ3B726 338 aaPredicted RBP26.48■■□□□ 1.83
CNTNAP3B-212ENST00000617422 ALDH1L2Q3SY69 923 aa26.48■■□□□ 1.83
CNTNAP3B-212ENST00000617422 ZKSCAN2Q63HK3 967 aa26.48■■□□□ 1.83
CNTNAP3B-212ENST00000617422 ERICH6Q7L0X2 663 aa26.48■■□□□ 1.83
CNTNAP3B-212ENST00000617422 IL17REQ8NFR9 667 aa26.48■■□□□ 1.83
CNTNAP3B-212ENST00000617422 NOB1Q9ULX3 412 aaKnown RBP26.48■■□□□ 1.83
CNTNAP3B-212ENST00000617422 KIAA0232Q92628 1395 aa26.48■■□□□ 1.83
CNTNAP3B-212ENST00000617422 MAP3K5Q99683 1374 aa26.48■■□□□ 1.83
CNTNAP3B-212ENST00000617422 TRIM27P14373 513 aa26.47■■□□□ 1.83
CNTNAP3B-212ENST00000617422 LTBP4Q8N2S1 1624 aa26.46■■□□□ 1.83
CNTNAP3B-212ENST00000617422 TCERG1O14776 1098 aaKnown RBP26.46■■□□□ 1.83
CNTNAP3B-212ENST00000617422 HTATSF1O43719 755 aaKnown RBP26.46■■□□□ 1.83
CNTNAP3B-212ENST00000617422 ZNF428Q96B54 188 aa26.44■■□□□ 1.82
CNTNAP3B-212ENST00000617422 CPDO75976 1380 aa26.44■■□□□ 1.82
CNTNAP3B-212ENST00000617422 MRPL50Q8N5N7 158 aaKnown RBP26.43■■□□□ 1.82
CNTNAP3B-212ENST00000617422 KDM2BQ8NHM5 1336 aa26.43■■□□□ 1.82
CNTNAP3B-212ENST00000617422 ABCA3Q99758 1704 aa26.43■■□□□ 1.82
CNTNAP3B-212ENST00000617422 FAM208AQ9UK61 1670 aaKnown RBP26.43■■□□□ 1.82
CNTNAP3B-212ENST00000617422 BRPF1P55201 1214 aaPredicted RBP26.42■■□□□ 1.82
CNTNAP3B-212ENST00000617422 ATF7IPQ6VMQ6 1270 aa26.42■■□□□ 1.82
CNTNAP3B-212ENST00000617422 DZIP1LQ8IYY4 767 aaKnown RBP26.41■■□□□ 1.82
CNTNAP3B-212ENST00000617422 TSPYL4Q9UJ04 414 aa26.4■■□□□ 1.82
CNTNAP3B-212ENST00000617422 KIF16BQ96L93 1317 aa26.4■■□□□ 1.82
CNTNAP3B-212ENST00000617422 ABCC6O95255 1503 aa26.4■■□□□ 1.82
CNTNAP3B-212ENST00000617422 LGR6Q9HBX8 967 aa26.39■■□□□ 1.82
CNTNAP3B-212ENST00000617422 CEMIPQ8WUJ3 1361 aa26.39■■□□□ 1.82
CNTNAP3B-212ENST00000617422 MVPQ14764 893 aaKnown RBP26.38■■□□□ 1.81
CNTNAP3B-212ENST00000617422 NLRP2Q9NX02 1062 aa26.38■■□□□ 1.81
CNTNAP3B-212ENST00000617422 ZNF530Q6P9A1 599 aaPredicted RBP26.37■■□□□ 1.81
CNTNAP3B-212ENST00000617422 SKAP1Q86WV1 359 aa26.37■■□□□ 1.81
CNTNAP3B-212ENST00000617422 FTSJ3Q8IY81 847 aaKnown RBP26.37■■□□□ 1.81
CNTNAP3B-212ENST00000617422 ROBO1Q9Y6N7 1651 aa26.37■■□□□ 1.81
CNTNAP3B-212ENST00000617422 PLEKHO1Q53GL0 409 aaPredicted RBP26.37■■□□□ 1.81
CNTNAP3B-212ENST00000617422 VIRMAQ69YN4 1812 aaKnown RBP26.35■■□□□ 1.81
CNTNAP3B-212ENST00000617422 TMEM57Q8N5G2 664 aa26.34■■□□□ 1.81
CNTNAP3B-212ENST00000617422 MEGF6O75095 1541 aa26.34■■□□□ 1.81
CNTNAP3B-212ENST00000617422 AMOTQ4VCS5 1084 aa26.34■■□□□ 1.81
CNTNAP3B-212ENST00000617422 AKAP4Q5JQC9 854 aa26.34■■□□□ 1.81
CNTNAP3B-212ENST00000617422 IPO8O15397 1037 aaKnown RBP26.33■■□□□ 1.81
CNTNAP3B-212ENST00000617422 IGHDP01880 384 aa26.33■■□□□ 1.81
CNTNAP3B-212ENST00000617422 PRDM11Q9NQV5 511 aa26.33■■□□□ 1.81
CNTNAP3B-212ENST00000617422 TAF7Q15545 349 aaPredicted RBP26.33■■□□□ 1.81
CNTNAP3B-212ENST00000617422 MPRIPQ6WCQ1 1025 aa26.33■■□□□ 1.81
CNTNAP3B-212ENST00000617422 PCDHB15Q9Y5E8 787 aa26.33■■□□□ 1.81
CNTNAP3B-212ENST00000617422 CSB-PGBD3P0DP91 1061 aa26.32■■□□□ 1.8
CNTNAP3B-212ENST00000617422 MS4A1P11836 297 aa26.31■■□□□ 1.8
CNTNAP3B-212ENST00000617422 CENPQQ7L2Z9 268 aaPredicted RBP26.31■■□□□ 1.8
CNTNAP3B-212ENST00000617422 ITPRIPQ8IWB1 547 aa26.3■■□□□ 1.8
CNTNAP3B-212ENST00000617422 ARHGAP45Q92619 1136 aa26.29■■□□□ 1.8
CNTNAP3B-212ENST00000617422 HAP1P54257 671 aaPredicted RBP26.28■■□□□ 1.8
CNTNAP3B-212ENST00000617422 RAPGEF4Q8WZA2 1011 aa26.28■■□□□ 1.8
CNTNAP3B-212ENST00000617422 COL5A2P05997 1499 aaPredicted RBP26.27■■□□□ 1.8
CNTNAP3B-212ENST00000617422 RNMTO43148 476 aaKnown RBP26.27■■□□□ 1.8
CNTNAP3B-212ENST00000617422 C1orf141Q5JVX7 400 aa26.27■■□□□ 1.8
CNTNAP3B-212ENST00000617422 KDM3BQ7LBC6 1761 aa26.27■■□□□ 1.8
CNTNAP3B-212ENST00000617422 ADAMTS7Q9UKP4 1686 aa26.26■■□□□ 1.8
CNTNAP3B-212ENST00000617422 AHDC1Q5TGY3 1603 aaPredicted RBP26.26■■□□□ 1.79
CNTNAP3B-212ENST00000617422 BABAM1Q9NWV8 329 aa26.26■■□□□ 1.79
CNTNAP3B-212ENST00000617422 ABCC4O15439 1325 aa26.25■■□□□ 1.79
CNTNAP3B-212ENST00000617422 RGS12O14924 1447 aa26.25■■□□□ 1.79
CNTNAP3B-212ENST00000617422 AAMPQ13685 434 aa26.25■■□□□ 1.79
CNTNAP3B-212ENST00000617422 DDX19BQ9UMR2 479 aa26.25■■□□□ 1.79
CNTNAP3B-212ENST00000617422 KCNQ3O43525 872 aa26.24■■□□□ 1.79
CNTNAP3B-212ENST00000617422 WDR17Q8IZU2 1322 aa26.24■■□□□ 1.79
CNTNAP3B-212ENST00000617422 TATP17735 454 aaPredicted RBP26.24■■□□□ 1.79
CNTNAP3B-212ENST00000617422 SIPA1L3O60292 1781 aaPredicted RBP26.23■■□□□ 1.79
CNTNAP3B-212ENST00000617422 PKD1L3Q7Z443 1732 aa26.22■■□□□ 1.79
CNTNAP3B-212ENST00000617422 ZBTB40Q9NUA8 1239 aa26.22■■□□□ 1.79
CNTNAP3B-212ENST00000617422 SLC4A2P04920 1241 aa26.22■■□□□ 1.79
CNTNAP3B-212ENST00000617422 G2E3Q7L622 706 aa26.22■■□□□ 1.79
CNTNAP3B-212ENST00000617422 OVOS2A0A0G2JMS6 1433 aa26.21■■□□□ 1.79
CNTNAP3B-212ENST00000617422 KDM6AO15550 1401 aaPredicted RBP26.21■■□□□ 1.79
CNTNAP3B-212ENST00000617422 TEFQ10587 303 aa26.21■■□□□ 1.79
CNTNAP3B-212ENST00000617422 SCN11AQ9UI33 1791 aa26.2■■□□□ 1.78
CNTNAP3B-212ENST00000617422 PHKG2P15735 406 aa26.19■■□□□ 1.78
CNTNAP3B-212ENST00000617422 EIF4A1P60842 406 aaKnown RBP26.19■■□□□ 1.78
CNTNAP3B-212ENST00000617422 NECTIN2Q92692 538 aa26.19■■□□□ 1.78
CNTNAP3B-212ENST00000617422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.19■■□□□ 1.78
CNTNAP3B-212ENST00000617422 CYP27B1O15528 508 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms