RNA–Protein interactions for RNA: ENST00000617408.1

PCDHA11-203, Transcript of protocadherin alpha 11, humanhuman

TSL 3

Gene PCDHA11, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-203ENST00000617408 AMER1Q5JTC6 1135 aaPredicted RBP28.67■■■□□ 2.18
PCDHA11-203ENST00000617408 TATP17735 454 aaPredicted RBP28.66■■■□□ 2.18
PCDHA11-203ENST00000617408 PSDA5PKW4 1024 aaPredicted RBP28.65■■■□□ 2.18
PCDHA11-203ENST00000617408 ZCRB1Q8TBF4 217 aaKnown RBP28.65■■■□□ 2.18
PCDHA11-203ENST00000617408 DOT1LQ8TEK3 1739 aa28.65■■■□□ 2.18
PCDHA11-203ENST00000617408 KCNQ2O43526 872 aa28.64■■■□□ 2.18
PCDHA11-203ENST00000617408 NCAPD2Q15021 1401 aa28.63■■■□□ 2.17
PCDHA11-203ENST00000617408 BTAF1O14981 1849 aa28.62■■■□□ 2.17
PCDHA11-203ENST00000617408 PLSCR1O15162 318 aa28.61■■■□□ 2.17
PCDHA11-203ENST00000617408 EIF4A2Q14240 407 aaKnown RBP28.61■■■□□ 2.17
PCDHA11-203ENST00000617408 CC2D1BQ5T0F9 858 aaKnown RBP28.61■■■□□ 2.17
PCDHA11-203ENST00000617408 PKD1L3Q7Z443 1732 aa28.6■■■□□ 2.17
PCDHA11-203ENST00000617408 PER1O15534 1290 aaPredicted RBP28.6■■■□□ 2.17
PCDHA11-203ENST00000617408 EYA1Q99502 592 aa28.6■■■□□ 2.17
PCDHA11-203ENST00000617408 KAT6BQ8WYB5 2073 aa28.59■■■□□ 2.17
PCDHA11-203ENST00000617408 R3HDM1Q15032 1099 aaKnown RBP28.59■■■□□ 2.17
PCDHA11-203ENST00000617408 CNGB1Q14028 1251 aaPredicted RBP28.58■■■□□ 2.17
PCDHA11-203ENST00000617408 PCDH11XQ9BZA7 1347 aa28.58■■■□□ 2.17
PCDHA11-203ENST00000617408 PCDH11YQ9BZA8 1340 aa28.58■■■□□ 2.17
PCDHA11-203ENST00000617408 NBPF14Q5TI25 921 aa28.55■■■□□ 2.16
PCDHA11-203ENST00000617408 SYTL4Q96C24 671 aaPredicted RBP28.55■■■□□ 2.16
PCDHA11-203ENST00000617408 IGSF1Q8N6C5 1336 aa28.52■■■□□ 2.16
PCDHA11-203ENST00000617408 NPC1L1Q9UHC9 1359 aa28.51■■■□□ 2.16
PCDHA11-203ENST00000617408 PRIM1P49642 420 aaKnown RBP28.5■■■□□ 2.15
PCDHA11-203ENST00000617408 TXNRD1Q16881 649 aa28.5■■■□□ 2.15
PCDHA11-203ENST00000617408 PROM2Q8N271 834 aa28.49■■■□□ 2.15
PCDHA11-203ENST00000617408 SPG7Q9UQ90 795 aa28.49■■■□□ 2.15
PCDHA11-203ENST00000617408 LRP5O75197 1615 aa28.48■■■□□ 2.15
PCDHA11-203ENST00000617408 CYP27B1O15528 508 aa28.48■■■□□ 2.15
PCDHA11-203ENST00000617408 TOGARAM1Q9Y4F4 1720 aa28.48■■■□□ 2.15
PCDHA11-203ENST00000617408 MTHFSP49914 203 aa28.47■■■□□ 2.15
PCDHA11-203ENST00000617408 ANO8Q9HCE9 1232 aaPredicted RBP28.46■■■□□ 2.15
PCDHA11-203ENST00000617408 IL13P35225 146 aa28.42■■■□□ 2.14
PCDHA11-203ENST00000617408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.42■■■□□ 2.14
PCDHA11-203ENST00000617408 PAPPAQ13219 1627 aa28.42■■■□□ 2.14
PCDHA11-203ENST00000617408 PLEKHG2Q9H7P9 1386 aa28.41■■■□□ 2.14
PCDHA11-203ENST00000617408 AEBP1Q8IUX7 1158 aa28.41■■■□□ 2.14
PCDHA11-203ENST00000617408 ITGB4P16144 1822 aa28.41■■■□□ 2.14
PCDHA11-203ENST00000617408 LY75O60449 1722 aa28.4■■■□□ 2.14
PCDHA11-203ENST00000617408 STK32BQ9NY57 414 aa28.4■■■□□ 2.14
PCDHA11-203ENST00000617408 SULT6B1Q6IMI4 303 aa28.39■■■□□ 2.14
PCDHA11-203ENST00000617408 IFNL2Q8IZJ0 200 aa28.38■■■□□ 2.13
PCDHA11-203ENST00000617408 PHKG2P15735 406 aa28.37■■■□□ 2.13
PCDHA11-203ENST00000617408 MPRIPQ6WCQ1 1025 aa28.37■■■□□ 2.13
PCDHA11-203ENST00000617408 CASZ1Q86V15 1759 aa28.36■■■□□ 2.13
PCDHA11-203ENST00000617408 KDRP35968 1356 aa28.36■■■□□ 2.13
PCDHA11-203ENST00000617408 COL3A1P02461 1466 aaPredicted RBP28.35■■■□□ 2.13
PCDHA11-203ENST00000617408 DIAPH1O60610 1272 aaKnown RBP28.35■■■□□ 2.13
PCDHA11-203ENST00000617408 NKX1-1Q15270 411 aaPredicted RBP28.35■■■□□ 2.13
PCDHA11-203ENST00000617408 PLEKHO1Q53GL0 409 aaPredicted RBP28.35■■■□□ 2.13
PCDHA11-203ENST00000617408 LRRC4BQ9NT99 713 aa28.35■■■□□ 2.13
PCDHA11-203ENST00000617408 SLC15A2Q16348 729 aa28.34■■■□□ 2.13
PCDHA11-203ENST00000617408 SLC27A3Q5K4L6 730 aa28.34■■■□□ 2.13
PCDHA11-203ENST00000617408 ZNF530Q6P9A1 599 aaPredicted RBP28.33■■■□□ 2.13
PCDHA11-203ENST00000617408 KCNQ4P56696 695 aa28.32■■■□□ 2.12
PCDHA11-203ENST00000617408 AMOTQ4VCS5 1084 aa28.32■■■□□ 2.12
PCDHA11-203ENST00000617408 CCNL1Q9UK58 526 aaPredicted RBP28.31■■■□□ 2.12
PCDHA11-203ENST00000617408 PALLDQ8WX93 1383 aa28.31■■■□□ 2.12
PCDHA11-203ENST00000617408 SRCAPQ6ZRS2 3230 aa28.31■■■□□ 2.12
PCDHA11-203ENST00000617408 HMOX1P09601 288 aa28.3■■■□□ 2.12
PCDHA11-203ENST00000617408 ZNF827Q17R98 1081 aa28.29■■■□□ 2.12
PCDHA11-203ENST00000617408 TMOD3Q9NYL9 352 aa28.29■■■□□ 2.12
PCDHA11-203ENST00000617408 C1orf141Q5JVX7 400 aa28.28■■■□□ 2.12
PCDHA11-203ENST00000617408 PIGBQ92521 554 aa28.28■■■□□ 2.12
PCDHA11-203ENST00000617408 C5P01031 1676 aa28.28■■■□□ 2.12
PCDHA11-203ENST00000617408 U2SURPO15042 1029 aaKnown RBP28.27■■■□□ 2.12
PCDHA11-203ENST00000617408 HSP90AB1P08238 724 aaKnown RBP28.27■■■□□ 2.12
PCDHA11-203ENST00000617408 CFAP53Q96M91 514 aa28.27■■■□□ 2.12
PCDHA11-203ENST00000617408 PDGFDQ9GZP0 370 aaPredicted RBP28.27■■■□□ 2.12
PCDHA11-203ENST00000617408 TUBGCP6Q96RT7 1819 aa28.26■■■□□ 2.11
PCDHA11-203ENST00000617408 KDM6AO15550 1401 aaPredicted RBP28.26■■■□□ 2.11
PCDHA11-203ENST00000617408 PPP2R1AP30153 589 aa28.25■■■□□ 2.11
PCDHA11-203ENST00000617408 SMARCC1Q92922 1105 aaPredicted RBP28.25■■■□□ 2.11
PCDHA11-203ENST00000617408 DCAF5Q96JK2 942 aa28.25■■■□□ 2.11
PCDHA11-203ENST00000617408 SPON1Q9HCB6 807 aa28.25■■■□□ 2.11
PCDHA11-203ENST00000617408 QSER1Q2KHR3 1735 aa28.23■■■□□ 2.11
PCDHA11-203ENST00000617408 AKT1S1Q96B36 256 aa28.23■■■□□ 2.11
PCDHA11-203ENST00000617408 ZBTB7AO95365 584 aa28.22■■■□□ 2.11
PCDHA11-203ENST00000617408 TAF1LQ8IZX4 1826 aa28.22■■■□□ 2.11
PCDHA11-203ENST00000617408 ZEB1P37275 1124 aaPredicted RBP28.2■■■□□ 2.1
PCDHA11-203ENST00000617408 TFCP2L1Q9NZI6 479 aa28.2■■■□□ 2.1
PCDHA11-203ENST00000617408 SCN11AQ9UI33 1791 aa28.19■■■□□ 2.1
PCDHA11-203ENST00000617408 ERVV-2B6SEH9 535 aa28.19■■■□□ 2.1
PCDHA11-203ENST00000617408 ASAP1Q9ULH1 1129 aa28.18■■■□□ 2.1
PCDHA11-203ENST00000617408 CABP4P57796 275 aa28.17■■■□□ 2.1
PCDHA11-203ENST00000617408 DDX10Q13206 875 aaKnown RBP28.17■■■□□ 2.1
PCDHA11-203ENST00000617408 AKAP4Q5JQC9 854 aa28.17■■■□□ 2.1
PCDHA11-203ENST00000617408 PPP1R1BQ9UD71 204 aaPredicted RBP28.17■■■□□ 2.1
PCDHA11-203ENST00000617408 VIRMAQ69YN4 1812 aaKnown RBP28.17■■■□□ 2.1
PCDHA11-203ENST00000617408 C4BP0C0L5 1744 aa28.16■■■□□ 2.1
PCDHA11-203ENST00000617408 ATF5Q9Y2D1 282 aaPredicted RBP28.16■■■□□ 2.1
PCDHA11-203ENST00000617408 PNPLA7Q6ZV29 1317 aa28.16■■■□□ 2.1
PCDHA11-203ENST00000617408 NUDCQ9Y266 331 aa28.15■■■□□ 2.1
PCDHA11-203ENST00000617408 LOC102724428A0A0B4J2F2 783 aa28.14■■■□□ 2.1
PCDHA11-203ENST00000617408 SIK1P57059 783 aa28.14■■■□□ 2.1
PCDHA11-203ENST00000617408 MTHFSDQ2M296 383 aaKnown RBP28.14■■■□□ 2.1
PCDHA11-203ENST00000617408 MTFR1LQ9H019 292 aa28.14■■■□□ 2.1
PCDHA11-203ENST00000617408 ATG3Q9NT62 314 aa28.14■■■□□ 2.1
PCDHA11-203ENST00000617408 HMGB2P26583 209 aaKnown RBP28.11■■■□□ 2.09
PCDHA11-203ENST00000617408 U2AF1L5P0DN76 240 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms