RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
TARDBP-218ENST00000617172 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-218ENST00000617172 EMILIN1Q9Y6C2 1016 aa13.32□□□□□ -0.28
TARDBP-218ENST00000617172 WASHC2AQ641Q2 1341 aa13.32□□□□□ -0.28
TARDBP-218ENST00000617172 USHBP1Q8N6Y0 703 aa13.31□□□□□ -0.28
TARDBP-218ENST00000617172 PANK3Q9H999 370 aa13.31□□□□□ -0.28
TARDBP-218ENST00000617172 POLKQ9UBT6 870 aa13.3□□□□□ -0.28
TARDBP-218ENST00000617172 PCDH11XQ9BZA7 1347 aa13.3□□□□□ -0.28
TARDBP-218ENST00000617172 PCDH11YQ9BZA8 1340 aa13.3□□□□□ -0.28
TARDBP-218ENST00000617172 NHSQ6T4R5 1651 aa13.29□□□□□ -0.28
TARDBP-218ENST00000617172 MEGF6O75095 1541 aa13.29□□□□□ -0.28
TARDBP-218ENST00000617172 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
TARDBP-218ENST00000617172 MTFR1LQ9H019 292 aa13.28□□□□□ -0.28
TARDBP-218ENST00000617172 LRRC4BQ9NT99 713 aa13.28□□□□□ -0.28
TARDBP-218ENST00000617172 ZBTB7AO95365 584 aa13.27□□□□□ -0.29
TARDBP-218ENST00000617172 PDGFDQ9GZP0 370 aaPredicted RBP13.27□□□□□ -0.29
TARDBP-218ENST00000617172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.293e-7■■□□□ 13.1
TARDBP-218ENST00000617172 SPG7Q9UQ90 795 aa13.27□□□□□ -0.29
TARDBP-218ENST00000617172 NSD2O96028 1365 aa13.27□□□□□ -0.29
TARDBP-218ENST00000617172 MYOM1P52179 1685 aa13.27□□□□□ -0.29
TARDBP-218ENST00000617172 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-218ENST00000617172 SLC16A10Q8TF71 515 aa13.26□□□□□ -0.29
TARDBP-218ENST00000617172 EYA1Q99502 592 aa13.26□□□□□ -0.29
TARDBP-218ENST00000617172 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-218ENST00000617172 KNSTRNQ9Y448 316 aa13.26□□□□□ -0.29
TARDBP-218ENST00000617172 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
TARDBP-218ENST00000617172 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
TARDBP-218ENST00000617172 CYP27B1O15528 508 aa13.24□□□□□ -0.29
TARDBP-218ENST00000617172 PTGER2P43116 358 aa13.24□□□□□ -0.29
TARDBP-218ENST00000617172 NKX1-1Q15270 411 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-218ENST00000617172 ZNF827Q17R98 1081 aa13.24□□□□□ -0.29
TARDBP-218ENST00000617172 MORC1Q86VD1 984 aa13.24□□□□□ -0.29
TARDBP-218ENST00000617172 TFCP2L1Q9NZI6 479 aa13.24□□□□□ -0.29
TARDBP-218ENST00000617172 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
TARDBP-218ENST00000617172 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
TARDBP-218ENST00000617172 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
TARDBP-218ENST00000617172 EIF4A2Q14240 407 aaKnown RBP13.23□□□□□ -0.29
TARDBP-218ENST00000617172 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
TARDBP-218ENST00000617172 KAT6BQ8WYB5 2073 aa13.22□□□□□ -0.29
TARDBP-218ENST00000617172 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
TARDBP-218ENST00000617172 IFNL2Q8IZJ0 200 aa13.22□□□□□ -0.29
TARDBP-218ENST00000617172 BTAF1O14981 1849 aa13.22□□□□□ -0.29
TARDBP-218ENST00000617172 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
TARDBP-218ENST00000617172 RGPD2P0DJD1 1756 aa13.2□□□□□ -0.3
TARDBP-218ENST00000617172 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
TARDBP-218ENST00000617172 KCNQ4P56696 695 aa13.2□□□□□ -0.3
TARDBP-218ENST00000617172 ARXQ96QS3 562 aa13.2□□□□□ -0.3
TARDBP-218ENST00000617172 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
TARDBP-218ENST00000617172 POLD1P28340 1107 aa13.19□□□□□ -0.3
TARDBP-218ENST00000617172 FLAD1Q8NFF5 587 aa13.19□□□□□ -0.3
TARDBP-218ENST00000617172 SYT17Q9BSW7 474 aa13.19□□□□□ -0.3
TARDBP-218ENST00000617172 KIF7Q2M1P5 1343 aa13.18□□□□□ -0.3
TARDBP-218ENST00000617172 PNPLA7Q6ZV29 1317 aa13.18□□□□□ -0.3
TARDBP-218ENST00000617172 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
TARDBP-218ENST00000617172 HSP90AB1P08238 724 aaKnown RBP13.18□□□□□ -0.3
TARDBP-218ENST00000617172 PHKG2P15735 406 aa13.18□□□□□ -0.3
TARDBP-218ENST00000617172 AMOTQ4VCS5 1084 aa13.18□□□□□ -0.3
TARDBP-218ENST00000617172 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-218ENST00000617172 PIGBQ92521 554 aa13.18□□□□□ -0.3
TARDBP-218ENST00000617172 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-218ENST00000617172 TMOD3Q9NYL9 352 aa13.18□□□□□ -0.3
TARDBP-218ENST00000617172 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
TARDBP-218ENST00000617172 ANKRD26Q9UPS8 1709 aa13.17□□□□□ -0.3
TARDBP-218ENST00000617172 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
TARDBP-218ENST00000617172 SHANK3Q9BYB0 1731 aa13.16□□□□□ -0.3
TARDBP-218ENST00000617172 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
TARDBP-218ENST00000617172 ERVV-2B6SEH9 535 aa13.16□□□□□ -0.3
TARDBP-218ENST00000617172 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
TARDBP-218ENST00000617172 DOT1LQ8TEK3 1739 aa13.16□□□□□ -0.3
TARDBP-218ENST00000617172 PER1O15534 1290 aaPredicted RBP13.15□□□□□ -0.3
TARDBP-218ENST00000617172 MSH5O43196 834 aa13.15□□□□□ -0.3
TARDBP-218ENST00000617172 MAP3K5Q99683 1374 aa13.15□□□□□ -0.3
TARDBP-218ENST00000617172 LOC102724428A0A0B4J2F2 783 aa13.14□□□□□ -0.31
TARDBP-218ENST00000617172 YY1P25490 414 aa13.14□□□□□ -0.31
TARDBP-218ENST00000617172 SIK1P57059 783 aa13.14□□□□□ -0.31
TARDBP-218ENST00000617172 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
TARDBP-218ENST00000617172 LY75O60449 1722 aa13.13□□□□□ -0.31
TARDBP-218ENST00000617172 IL13P35225 146 aa13.13□□□□□ -0.31
TARDBP-218ENST00000617172 MTHFSP49914 203 aa13.13□□□□□ -0.31
TARDBP-218ENST00000617172 C1orf141Q5JVX7 400 aa13.13□□□□□ -0.31
TARDBP-218ENST00000617172 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
TARDBP-218ENST00000617172 AK7Q96M32 723 aa13.13□□□□□ -0.31
TARDBP-218ENST00000617172 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
TARDBP-218ENST00000617172 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-218ENST00000617172 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
TARDBP-218ENST00000617172 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
TARDBP-218ENST00000617172 CABP4P57796 275 aa13.11□□□□□ -0.31
TARDBP-218ENST00000617172 ATG3Q9NT62 314 aa13.11□□□□□ -0.31
TARDBP-218ENST00000617172 KDRP35968 1356 aa13.1□□□□□ -0.31
TARDBP-218ENST00000617172 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
TARDBP-218ENST00000617172 SSFA2P28290 1259 aa13.1□□□□□ -0.31
TARDBP-218ENST00000617172 CC2D1BQ5T0F9 858 aaKnown RBP13.1□□□□□ -0.31
TARDBP-218ENST00000617172 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
TARDBP-218ENST00000617172 QSER1Q2KHR3 1735 aa13.09□□□□□ -0.31
TARDBP-218ENST00000617172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
TARDBP-218ENST00000617172 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
TARDBP-218ENST00000617172 GPR162Q16538 588 aa13.08□□□□□ -0.32
TARDBP-218ENST00000617172 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
TARDBP-218ENST00000617172 LINC00116Q8NCU8 138 aa13.08□□□□□ -0.32
TARDBP-218ENST00000617172 ITPK1Q13572 414 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms