RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	PRMT3	O60678	531 aa		9.4	□□□□□ -0.9
PVT1-225	ENST00000617087	SCNN1A	P37088	669 aa		9.4	□□□□□ -0.9
PVT1-225	ENST00000617087	SERPINB4	P48594	390 aa		9.4	□□□□□ -0.9
PVT1-225	ENST00000617087	KCTD15	Q96SI1	283 aa	Predicted RBP	9.39	□□□□□ -0.91
PVT1-225	ENST00000617087		M0R2N6	131 aa		9.38	□□□□□ -0.91
PVT1-225	ENST00000617087	ZBTB24	O43167	697 aa	Predicted RBP	9.38	□□□□□ -0.91
PVT1-225	ENST00000617087	PSME1	Q06323	249 aa		9.38	□□□□□ -0.91
PVT1-225	ENST00000617087	PRIMPOL	Q96LW4	560 aa		9.38	□□□□□ -0.91
PVT1-225	ENST00000617087	MAP4K5	Q9Y4K4	846 aa		9.38	□□□□□ -0.91
PVT1-225	ENST00000617087	VARS	P26640	1264 aa	Known RBP	9.37	□□□□□ -0.91
PVT1-225	ENST00000617087	WNT7B	P56706	349 aa		9.37	□□□□□ -0.91
PVT1-225	ENST00000617087	SKOR1	P84550	965 aa		9.37	□□□□□ -0.91
PVT1-225	ENST00000617087	TRIM32	Q13049	653 aa		9.37	□□□□□ -0.91
PVT1-225	ENST00000617087	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	9.37	□□□□□ -0.91
PVT1-225	ENST00000617087	ANKLE1	Q8NAG6	615 aa		9.37	□□□□□ -0.91
PVT1-225	ENST00000617087	RNF223	E7ERA6	249 aa		9.36	□□□□□ -0.91
PVT1-225	ENST00000617087	ERCC3	P19447	782 aa		9.36	□□□□□ -0.91
PVT1-225	ENST00000617087	INTS6L	Q5JSJ4	861 aa	Known RBP	9.36	□□□□□ -0.91
PVT1-225	ENST00000617087	PLA2G2C	Q5R387	149 aa		9.36	□□□□□ -0.91
PVT1-225	ENST00000617087		E9PSI1	815 aa		9.35	□□□□□ -0.91
PVT1-225	ENST00000617087	MYC	P01106	439 aa	Predicted RBP	9.35	□□□□□ -0.91
PVT1-225	ENST00000617087	WEE1	P30291	646 aa		9.35	□□□□□ -0.91
PVT1-225	ENST00000617087	KCNC4	Q03721	635 aa		9.35	□□□□□ -0.91
PVT1-225	ENST00000617087	CDAN1	Q8IWY9	1227 aa		9.35	□□□□□ -0.91
PVT1-225	ENST00000617087	HINFP	Q9BQA5	517 aa		9.35	□□□□□ -0.91
PVT1-225	ENST00000617087	EGFL7	Q9UHF1	273 aa		9.35	□□□□□ -0.91
PVT1-225	ENST00000617087	ERVH48-1	M5A8F1	160 aa		9.34	□□□□□ -0.91
PVT1-225	ENST00000617087	ITGBL1	O95965	494 aa	Predicted RBP	9.34	□□□□□ -0.91
PVT1-225	ENST00000617087	VASH1	Q7L8A9	365 aa	Predicted RBP	9.34	□□□□□ -0.91
PVT1-225	ENST00000617087	SCTR	P47872	440 aa		9.33	□□□□□ -0.92
PVT1-225	ENST00000617087	RPIA	P49247	311 aa		9.33	□□□□□ -0.92
PVT1-225	ENST00000617087	RAB15	P59190	212 aa		9.33	□□□□□ -0.92
PVT1-225	ENST00000617087	ERVK-9	P63128	1117 aa		9.33	□□□□□ -0.92
PVT1-225	ENST00000617087	NOM1	Q5C9Z4	860 aa	Known RBP	9.33	□□□□□ -0.92
PVT1-225	ENST00000617087	TSEN2	Q8NCE0	465 aa	Known RBP	9.33	□□□□□ -0.92
PVT1-225	ENST00000617087	RBM47	A0AV96	593 aa	Known RBP	9.32	□□□□□ -0.92
PVT1-225	ENST00000617087	LGR5	O75473	907 aa		9.32	□□□□□ -0.92
PVT1-225	ENST00000617087	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	9.32	□□□□□ -0.92
PVT1-225	ENST00000617087	CDK15	Q96Q40	435 aa		9.32	□□□□□ -0.92
PVT1-225	ENST00000617087	TMEM229A	B2RXF0	380 aa		9.31	□□□□□ -0.92
PVT1-225	ENST00000617087	GGCX	P38435	758 aa		9.31	□□□□□ -0.92
PVT1-225	ENST00000617087	CC2D2B	Q6DHV5	1058 aa		9.31	□□□□□ -0.92
PVT1-225	ENST00000617087	ZNF358	Q9NW07	568 aa		9.31	□□□□□ -0.92
PVT1-225	ENST00000617087	ICMT	O60725	284 aa		9.3	□□□□□ -0.92
PVT1-225	ENST00000617087	ABL1	P00519	1130 aa		9.3	□□□□□ -0.92
PVT1-225	ENST00000617087	MARS	P56192	900 aa	Known RBP	9.3	□□□□□ -0.92
PVT1-225	ENST00000617087	MPND	Q8N594	471 aa		9.3	□□□□□ -0.92
PVT1-225	ENST00000617087	BIN2	Q9UBW5	565 aa	Predicted RBP	9.3	□□□□□ -0.92
PVT1-225	ENST00000617087	WASL	O00401	505 aa	Predicted RBP	9.29	□□□□□ -0.92
PVT1-225	ENST00000617087	GRM5	P41594	1212 aa		9.29	□□□□□ -0.92
PVT1-225	ENST00000617087	FKBP5	Q13451	457 aa	Predicted RBP	9.29	□□□□□ -0.92
PVT1-225	ENST00000617087	EHBP1	Q8NDI1	1231 aa		9.29	□□□□□ -0.92
PVT1-225	ENST00000617087	OSBPL3	Q9H4L5	887 aa		9.29	□□□□□ -0.92
PVT1-225	ENST00000617087	PTCD1	O75127	700 aa	Known RBP	9.28	□□□□□ -0.92
PVT1-225	ENST00000617087	IGFBP4	P22692	258 aa		9.28	□□□□□ -0.92
PVT1-225	ENST00000617087	SCNN1D	P51172	638 aa		9.28	□□□□□ -0.92
PVT1-225	ENST00000617087	ZNF211	Q13398	564 aa	Predicted RBP	9.28	□□□□□ -0.92
PVT1-225	ENST00000617087	ECM1	Q16610	540 aa		9.28	□□□□□ -0.92
PVT1-225	ENST00000617087	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.28	□□□□□ -0.92
PVT1-225	ENST00000617087	COL26A1	Q96A83	441 aa		9.28	□□□□□ -0.92
PVT1-225	ENST00000617087	HCST	Q9UBK5	93 aa		9.28	□□□□□ -0.92
PVT1-225	ENST00000617087	SEPT3	Q9UH03	358 aa		9.28	□□□□□ -0.92
PVT1-225	ENST00000617087	UNCX	A6NJT0	531 aa		9.27	□□□□□ -0.93
PVT1-225	ENST00000617087		H3BRB1	525 aa		9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	DHX9	Q08211	1270 aa	Known RBP	9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	RC3H1	Q5TC82	1133 aa	Known RBP	9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	CAPN12	Q6ZSI9	719 aa		9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	TRIM52	Q96A61	297 aa		9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	PURB	Q96QR8	312 aa	Known RBP	9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	ESF1	Q9H501	851 aa	Known RBP	9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	TUT1	Q9H6E5	874 aa	Known RBP	9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	TMPRSS4	Q9NRS4	437 aa		9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	9.27	□□□□□ -0.93
PVT1-225	ENST00000617087	BACH1	O14867	736 aa		9.26	□□□□□ -0.93
PVT1-225	ENST00000617087	SIAH2	O43255	324 aa		9.26	□□□□□ -0.93
PVT1-225	ENST00000617087	C21orf2	O43822	256 aa		9.26	□□□□□ -0.93
PVT1-225	ENST00000617087	CD2BP2	O95400	341 aa	Known RBP	9.26	□□□□□ -0.93
PVT1-225	ENST00000617087	GDF10	P55107	478 aa		9.26	□□□□□ -0.93
PVT1-225	ENST00000617087	ARID5B	Q14865	1188 aa		9.26	□□□□□ -0.93
PVT1-225	ENST00000617087	PPP1R18	Q6NYC8	613 aa		9.26	□□□□□ -0.93
PVT1-225	ENST00000617087	POTEG	Q6S5H5	508 aa		9.26	□□□□□ -0.93
PVT1-225	ENST00000617087	ANO2	Q9NQ90	1003 aa		9.26	□□□□□ -0.93
PVT1-225	ENST00000617087	FOXO3	O43524	673 aa		9.25	□□□□□ -0.93
PVT1-225	ENST00000617087	FSHR	P23945	695 aa		9.25	□□□□□ -0.93
PVT1-225	ENST00000617087	EPHA4	P54764	986 aa		9.25	□□□□□ -0.93
PVT1-225	ENST00000617087	FKBP4	Q02790	459 aa	Known RBP eCLIP	9.25	□□□□□ -0.93
PVT1-225	ENST00000617087	SF3B2	Q13435	895 aa	Known RBP	9.25	□□□□□ -0.93
PVT1-225	ENST00000617087	GLYCTK	Q8IVS8	523 aa		9.25	□□□□□ -0.93
PVT1-225	ENST00000617087	MKNK1	Q9BUB5	465 aa		9.25	□□□□□ -0.93
PVT1-225	ENST00000617087	STAU1	O95793	577 aa	Known RBP	9.24	□□□□□ -0.93
PVT1-225	ENST00000617087	INHA	P05111	366 aa		9.24	□□□□□ -0.93
PVT1-225	ENST00000617087	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.24	□□□□□ -0.93
PVT1-225	ENST00000617087	GAS2L2	Q8NHY3	880 aa		9.24	□□□□□ -0.93
PVT1-225	ENST00000617087	SLC4A9	Q96Q91	983 aa		9.24	□□□□□ -0.93
PVT1-225	ENST00000617087	CYLD	Q9NQC7	956 aa		9.24	□□□□□ -0.93
PVT1-225	ENST00000617087	ATAD2	Q6PL18	1390 aa		9.24	□□□□□ -0.93
PVT1-225	ENST00000617087	ANKRD33B	A6NCL7	494 aa		9.23	□□□□□ -0.93
PVT1-225	ENST00000617087	LILRA1	O75019	489 aa		9.23	□□□□□ -0.93
PVT1-225	ENST00000617087	LIAT1	Q6ZQX7	453 aa		9.23	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms