RNA–Protein interactions for RNA: ENST00000617020.1

PCDH9-206, Transcript of protocadherin 9, humanhuman

TSL 5

Gene PCDH9, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-206ENST00000617020 EZH2Q15910 746 aaKnown RBP9.72□□□□□ -0.85
PCDH9-206ENST00000617020 ORAI2Q96SN7 254 aa9.72□□□□□ -0.85
PCDH9-206ENST00000617020 NRAPQ86VF7 1730 aa9.72□□□□□ -0.85
PCDH9-206ENST00000617020 LCE2BO14633 110 aa9.71□□□□□ -0.86
PCDH9-206ENST00000617020 LAPTM4AQ15012 233 aa9.71□□□□□ -0.86
PCDH9-206ENST00000617020 FAM98CQ17RN3 349 aaKnown RBP9.71□□□□□ -0.86
PCDH9-206ENST00000617020 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.86
PCDH9-206ENST00000617020 TRIM6-TRIM34B2RNG4 842 aa9.7□□□□□ -0.86
PCDH9-206ENST00000617020 C6orf132Q5T0Z8 1188 aa9.7□□□□□ -0.86
PCDH9-206ENST00000617020 EPAS1Q99814 870 aa9.7□□□□□ -0.86
PCDH9-206ENST00000617020 TSR3Q9UJK0 312 aaKnown RBP9.7□□□□□ -0.86
PCDH9-206ENST00000617020 IQGAP3Q86VI3 1631 aa9.7□□□□□ -0.86
PCDH9-206ENST00000617020 ADGRL2O95490 1459 aa9.69□□□□□ -0.86
PCDH9-206ENST00000617020 VPS72Q15906 364 aa9.69□□□□□ -0.86
PCDH9-206ENST00000617020 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
PCDH9-206ENST00000617020 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.69□□□□□ -0.86
PCDH9-206ENST00000617020 THSD7AQ9UPZ6 1657 aa9.68□□□□□ -0.86
PCDH9-206ENST00000617020 MYT1Q01538 1121 aa9.68□□□□□ -0.86
PCDH9-206ENST00000617020 FAM182BQ5T319 152 aa9.68□□□□□ -0.86
PCDH9-206ENST00000617020 SPON1Q9HCB6 807 aa9.68□□□□□ -0.86
PCDH9-206ENST00000617020 HPS5Q9UPZ3 1129 aa9.68□□□□□ -0.86
PCDH9-206ENST00000617020 METP08581 1390 aa9.67□□□□□ -0.86
PCDH9-206ENST00000617020 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
PCDH9-206ENST00000617020 LRCH3Q96II8 777 aa9.67□□□□□ -0.86
PCDH9-206ENST00000617020 CAMKK2Q96RR4 588 aa9.67□□□□□ -0.86
PCDH9-206ENST00000617020 RRP7BPQ9NSQ0 103 aa9.67□□□□□ -0.86
PCDH9-206ENST00000617020 E9PCH4 1651 aa9.67□□□□□ -0.86
PCDH9-206ENST00000617020 XPCQ01831 940 aaPredicted RBP9.66□□□□□ -0.86
PCDH9-206ENST00000617020 CCDC9Q9Y3X0 531 aaKnown RBP9.66□□□□□ -0.86
PCDH9-206ENST00000617020 MYOM3Q5VTT5 1437 aa9.65□□□□□ -0.86
PCDH9-206ENST00000617020 SHANK3Q9BYB0 1731 aa9.65□□□□□ -0.86
PCDH9-206ENST00000617020 PARD3Q8TEW0 1356 aa9.65□□□□□ -0.86
PCDH9-206ENST00000617020 NPHP3Q7Z494 1330 aa9.65□□□□□ -0.86
PCDH9-206ENST00000617020 KCNQ2O43526 872 aa9.65□□□□□ -0.86
PCDH9-206ENST00000617020 CDC42BPGQ6DT37 1551 aa9.64□□□□□ -0.87
PCDH9-206ENST00000617020 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
PCDH9-206ENST00000617020 GFRA3O60609 400 aa9.63□□□□□ -0.87
PCDH9-206ENST00000617020 TRAF7Q6Q0C0 670 aa9.63□□□□□ -0.87
PCDH9-206ENST00000617020 ABCC5O15440 1437 aa9.63□□□□□ -0.87
PCDH9-206ENST00000617020 GOLGB1Q14789 3259 aaKnown RBP9.62□□□□□ -0.87
PCDH9-206ENST00000617020 KIF1AQ12756 1690 aa9.61□□□□□ -0.87
PCDH9-206ENST00000617020 DPYSL4O14531 572 aa9.61□□□□□ -0.87
PCDH9-206ENST00000617020 NEXMIFQ5QGS0 1516 aa9.61□□□□□ -0.87
PCDH9-206ENST00000617020 RGPD3A6NKT7 1758 aaPredicted RBP9.6□□□□□ -0.87
PCDH9-206ENST00000617020 RGPD4Q7Z3J3 1758 aa9.6□□□□□ -0.87
PCDH9-206ENST00000617020 TRIM37O94972 964 aa9.6□□□□□ -0.87
PCDH9-206ENST00000617020 NBPF8Q3BBV2 869 aa9.6□□□□□ -0.87
PCDH9-206ENST00000617020 NBPF14Q5TI25 921 aa9.6□□□□□ -0.87
PCDH9-206ENST00000617020 DLC1Q96QB1 1528 aa9.6□□□□□ -0.87
PCDH9-206ENST00000617020 ROBO2Q9HCK4 1378 aa9.6□□□□□ -0.87
PCDH9-206ENST00000617020 RGPD8O14715 1765 aaPredicted RBP9.6□□□□□ -0.87
PCDH9-206ENST00000617020 DAPK1P53355 1430 aa9.59□□□□□ -0.87
PCDH9-206ENST00000617020 FOXO3O43524 673 aa9.59□□□□□ -0.87
PCDH9-206ENST00000617020 APBA3O96018 575 aa9.59□□□□□ -0.87
PCDH9-206ENST00000617020 ESCO1Q5FWF5 840 aa9.59□□□□□ -0.87
PCDH9-206ENST00000617020 TJAP1Q5JTD0 557 aa9.59□□□□□ -0.87
PCDH9-206ENST00000617020 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
PCDH9-206ENST00000617020 COL14A1Q05707 1796 aaKnown RBP9.59□□□□□ -0.87
PCDH9-206ENST00000617020 NRG2O14511 850 aaPredicted RBP9.58□□□□□ -0.88
PCDH9-206ENST00000617020 PRKD2Q9BZL6 878 aa9.58□□□□□ -0.88
PCDH9-206ENST00000617020 SPATA31A3Q5VYP0 1347 aa9.57□□□□□ -0.88
PCDH9-206ENST00000617020 FMN2Q9NZ56 1722 aa9.57□□□□□ -0.88
PCDH9-206ENST00000617020 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
PCDH9-206ENST00000617020 PPP4CP60510 307 aa9.57□□□□□ -0.88
PCDH9-206ENST00000617020 PACS2Q86VP3 889 aa9.57□□□□□ -0.88
PCDH9-206ENST00000617020 DDX12PQ92771 950 aa9.57□□□□□ -0.88
PCDH9-206ENST00000617020 LRPPRCP42704 1394 aaKnown RBP9.57□□□□□ -0.88
PCDH9-206ENST00000617020 CABLES1Q8TDN4 633 aa9.56□□□□□ -0.88
PCDH9-206ENST00000617020 CCDC144AA2RUR9 1427 aa9.56□□□□□ -0.88
PCDH9-206ENST00000617020 TNS3Q68CZ2 1445 aa9.56□□□□□ -0.88
PCDH9-206ENST00000617020 PRAG1Q86YV5 1406 aa9.56□□□□□ -0.88
PCDH9-206ENST00000617020 ANKRD30AQ9BXX3 1397 aa9.55□□□□□ -0.88
PCDH9-206ENST00000617020 SBF2Q86WG5 1849 aa9.55□□□□□ -0.88
PCDH9-206ENST00000617020 FHDC1Q9C0D6 1143 aaPredicted RBP9.55□□□□□ -0.88
PCDH9-206ENST00000617020 TSR1Q2NL82 804 aaKnown RBP9.54□□□□□ -0.88
PCDH9-206ENST00000617020 SYT17Q9BSW7 474 aa9.54□□□□□ -0.88
PCDH9-206ENST00000617020 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-206ENST00000617020 HFM1A2PYH4 1435 aa9.54□□□□□ -0.88
PCDH9-206ENST00000617020 IFT172Q9UG01 1749 aa9.53□□□□□ -0.88
PCDH9-206ENST00000617020 CRYBG1Q9Y4K1 1723 aa9.53□□□□□ -0.88
PCDH9-206ENST00000617020 FAM83GA6ND36 823 aa9.53□□□□□ -0.88
PCDH9-206ENST00000617020 FAM196AQ6ZSG2 479 aa9.53□□□□□ -0.88
PCDH9-206ENST00000617020 SAMD7Q7Z3H4 446 aa9.53□□□□□ -0.88
PCDH9-206ENST00000617020 MTRQ99707 1265 aa9.53□□□□□ -0.88
PCDH9-206ENST00000617020 PDGFDQ9GZP0 370 aaPredicted RBP9.53□□□□□ -0.88
PCDH9-206ENST00000617020 IL21Q9HBE4 155 aa9.53□□□□□ -0.88
PCDH9-206ENST00000617020 SPATA31A5Q5VU36 1347 aa9.53□□□□□ -0.88
PCDH9-206ENST00000617020 SPATA31A7Q8IWB4 1347 aa9.53□□□□□ -0.88
PCDH9-206ENST00000617020 MAP3K7O43318 606 aa9.52□□□□□ -0.89
PCDH9-206ENST00000617020 ZBTB7AO95365 584 aa9.52□□□□□ -0.89
PCDH9-206ENST00000617020 HSPA6P17066 643 aa9.52□□□□□ -0.89
PCDH9-206ENST00000617020 NBR1Q14596 966 aa9.52□□□□□ -0.89
PCDH9-206ENST00000617020 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
PCDH9-206ENST00000617020 BTG4Q9NY30 223 aa9.52□□□□□ -0.89
PCDH9-206ENST00000617020 CHIC2Q9UKJ5 165 aa9.52□□□□□ -0.89
PCDH9-206ENST00000617020 KIF1BO60333 1816 aa9.52□□□□□ -0.89
PCDH9-206ENST00000617020 RRBP1Q9P2E9 1410 aaKnown RBP9.51□□□□□ -0.89
PCDH9-206ENST00000617020 NAIPQ13075 1403 aa9.5□□□□□ -0.89
PCDH9-206ENST00000617020 NUTM2FA1L443 756 aa9.5□□□□□ -0.89
PCDH9-206ENST00000617020 SMAPO00193 183 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms