RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 MIS18AQ9NYP9 233 aa14.43□□□□□ -0.1
PCDHGA9-202ENST00000616887 HSP90AA1P07900 732 aaKnown RBP14.43□□□□□ -0.1
PCDHGA9-202ENST00000616887 EYA1Q99502 592 aa14.43□□□□□ -0.1
PCDHGA9-202ENST00000616887 KIF16BQ96L93 1317 aa14.43□□□□□ -0.1
PCDHGA9-202ENST00000616887 FLT4P35916 1363 aa14.43□□□□□ -0.1
PCDHGA9-202ENST00000616887 RRP9O43818 475 aaKnown RBP14.42□□□□□ -0.1
PCDHGA9-202ENST00000616887 PDZRN3Q9UPQ7 1066 aa14.42□□□□□ -0.1
PCDHGA9-202ENST00000616887 SBNO1A3KN83 1393 aa14.42□□□□□ -0.1
PCDHGA9-202ENST00000616887 ADGRL3Q9HAR2 1447 aa14.42□□□□□ -0.1
PCDHGA9-202ENST00000616887 MRPL50Q8N5N7 158 aaKnown RBP14.42□□□□□ -0.1
PCDHGA9-202ENST00000616887 ARXQ96QS3 562 aa14.42□□□□□ -0.1
PCDHGA9-202ENST00000616887 PHF8Q9UPP1 1060 aa14.42□□□□□ -0.1
PCDHGA9-202ENST00000616887 MTHFSDQ2M296 383 aaKnown RBP14.41□□□□□ -0.1
PCDHGA9-202ENST00000616887 ALDH1L2Q3SY69 923 aa14.41□□□□□ -0.1
PCDHGA9-202ENST00000616887 ESCO1Q5FWF5 840 aa14.41□□□□□ -0.1
PCDHGA9-202ENST00000616887 TMEM94Q12767 1356 aa14.41□□□□□ -0.1
PCDHGA9-202ENST00000616887 RGPD1P0DJD0 1748 aa14.41□□□□□ -0.1
PCDHGA9-202ENST00000616887 CALD1Q05682 793 aaKnown RBP14.41□□□□□ -0.1
PCDHGA9-202ENST00000616887 LMOD3Q0VAK6 560 aa14.41□□□□□ -0.1
PCDHGA9-202ENST00000616887 C1orf115Q9H7X2 142 aa14.41□□□□□ -0.1
PCDHGA9-202ENST00000616887 USHBP1Q8N6Y0 703 aa14.4□□□□□ -0.1
PCDHGA9-202ENST00000616887 DDX19BQ9UMR2 479 aa14.4□□□□□ -0.1
PCDHGA9-202ENST00000616887 XIRP1Q702N8 1843 aaKnown RBP14.4□□□□□ -0.1
PCDHGA9-202ENST00000616887 HOXC9P31274 260 aa14.4□□□□□ -0.1
PCDHGA9-202ENST00000616887 ORAI2Q96SN7 254 aa14.4□□□□□ -0.1
PCDHGA9-202ENST00000616887 ZBTB7CA1YPR0 619 aa14.39□□□□□ -0.11
PCDHGA9-202ENST00000616887 SEC24BO95487 1268 aa14.39□□□□□ -0.11
PCDHGA9-202ENST00000616887 NCOA3Q9Y6Q9 1424 aa14.39□□□□□ -0.11
PCDHGA9-202ENST00000616887 MARF1Q9Y4F3 1742 aaKnown RBP14.39□□□□□ -0.11
PCDHGA9-202ENST00000616887 ZBTB40Q9NUA8 1239 aa14.39□□□□□ -0.11
PCDHGA9-202ENST00000616887 ARHGEF10O15013 1369 aa14.38□□□□□ -0.11
PCDHGA9-202ENST00000616887 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA9-202ENST00000616887 IGSF1Q8N6C5 1336 aa14.38□□□□□ -0.11
PCDHGA9-202ENST00000616887 IPO8O15397 1037 aaKnown RBP14.38□□□□□ -0.11
PCDHGA9-202ENST00000616887 KDRP35968 1356 aa14.36□□□□□ -0.11
PCDHGA9-202ENST00000616887 CHL1O00533 1208 aa14.36□□□□□ -0.11
PCDHGA9-202ENST00000616887 AAMPQ13685 434 aa14.35□□□□□ -0.11
PCDHGA9-202ENST00000616887 CERKQ8TCT0 537 aa14.35□□□□□ -0.11
PCDHGA9-202ENST00000616887 CRB1P82279 1406 aa14.35□□□□□ -0.11
PCDHGA9-202ENST00000616887 PSME1Q06323 249 aa14.35□□□□□ -0.11
PCDHGA9-202ENST00000616887 BRPF1P55201 1214 aaPredicted RBP14.34□□□□□ -0.11
PCDHGA9-202ENST00000616887 ZBTB7BO15156 539 aaPredicted RBP14.34□□□□□ -0.11
PCDHGA9-202ENST00000616887 LMOD2Q6P5Q4 547 aa14.34□□□□□ -0.11
PCDHGA9-202ENST00000616887 ZNF428Q96B54 188 aa14.34□□□□□ -0.11
PCDHGA9-202ENST00000616887 L1TD1Q5T7N2 865 aaKnown RBP14.33□□□□□ -0.11
PCDHGA9-202ENST00000616887 C19orf44Q9H6X5 657 aa14.33□□□□□ -0.11
PCDHGA9-202ENST00000616887 ABCC4O15439 1325 aa14.33□□□□□ -0.12
PCDHGA9-202ENST00000616887 MSH6P52701 1360 aa14.33□□□□□ -0.12
PCDHGA9-202ENST00000616887 HDAC1Q13547 482 aaPredicted RBP14.33□□□□□ -0.12
PCDHGA9-202ENST00000616887 DCCP43146 1447 aa14.33□□□□□ -0.12
PCDHGA9-202ENST00000616887 USP19O94966 1318 aa14.32□□□□□ -0.12
PCDHGA9-202ENST00000616887 RTF1Q92541 710 aaKnown RBP14.32□□□□□ -0.12
PCDHGA9-202ENST00000616887 TSPYL4Q9UJ04 414 aa14.32□□□□□ -0.12
PCDHGA9-202ENST00000616887 DDX17Q92841 729 aaKnown RBP14.31□□□□□ -0.12
PCDHGA9-202ENST00000616887 LRRC59Q96AG4 307 aaKnown RBP14.31□□□□□ -0.12
PCDHGA9-202ENST00000616887 CLCN1P35523 988 aa14.3□□□□□ -0.12
PCDHGA9-202ENST00000616887 SIRT2Q8IXJ6 389 aa14.3□□□□□ -0.12
PCDHGA9-202ENST00000616887 LNPKQ9C0E8 428 aa14.3□□□□□ -0.12
PCDHGA9-202ENST00000616887 RGS12O14924 1447 aa14.3□□□□□ -0.12
PCDHGA9-202ENST00000616887 NBPF6Q5VWK0 638 aa14.3□□□□□ -0.12
PCDHGA9-202ENST00000616887 SMC5Q8IY18 1101 aa14.3□□□□□ -0.12
PCDHGA9-202ENST00000616887 ARHGAP45Q92619 1136 aa14.3□□□□□ -0.12
PCDHGA9-202ENST00000616887 NECTIN2Q92692 538 aa14.3□□□□□ -0.12
PCDHGA9-202ENST00000616887 NBPF4Q96M43 638 aa14.3□□□□□ -0.12
PCDHGA9-202ENST00000616887 NFAT5O94916 1531 aa14.29□□□□□ -0.12
PCDHGA9-202ENST00000616887 ATF3P18847 181 aa14.29□□□□□ -0.12
PCDHGA9-202ENST00000616887 G2E3Q7L622 706 aa14.29□□□□□ -0.12
PCDHGA9-202ENST00000616887 GAS2L2Q8NHY3 880 aa14.29□□□□□ -0.12
PCDHGA9-202ENST00000616887 KIF1AQ12756 1690 aa14.29□□□□□ -0.12
PCDHGA9-202ENST00000616887 IL17REQ8NFR9 667 aa14.29□□□□□ -0.12
PCDHGA9-202ENST00000616887 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
PCDHGA9-202ENST00000616887 LTN1O94822 1766 aa14.28□□□□□ -0.12
PCDHGA9-202ENST00000616887 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
PCDHGA9-202ENST00000616887 A0A0U1RQG5 324 aaPredicted RBP14.28□□□□□ -0.12
PCDHGA9-202ENST00000616887 F6X3S4 739 aa14.28□□□□□ -0.12
PCDHGA9-202ENST00000616887 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
PCDHGA9-202ENST00000616887 GNAT3A8MTJ3 354 aa14.27□□□□□ -0.13
PCDHGA9-202ENST00000616887 KLHL34Q8N239 644 aa14.27□□□□□ -0.13
PCDHGA9-202ENST00000616887 IP6K1Q92551 441 aa14.27□□□□□ -0.13
PCDHGA9-202ENST00000616887 API5Q9BZZ5 524 aaKnown RBP14.27□□□□□ -0.13
PCDHGA9-202ENST00000616887 KIAA0232Q92628 1395 aa14.27□□□□□ -0.13
PCDHGA9-202ENST00000616887 XRCC6P12956 609 aaKnown RBP eCLIP14.27□□□□□ -0.13
PCDHGA9-202ENST00000616887 GCP02774 474 aa14.26□□□□□ -0.13
PCDHGA9-202ENST00000616887 UBAP1LF5GYI3 381 aa14.26□□□□□ -0.13
PCDHGA9-202ENST00000616887 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 NUCB1Q02818 461 aa14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 PANK2Q9BZ23 570 aa14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 MST1RQ04912 1400 aa14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 KIF24Q5T7B8 1368 aa14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 MAP3K5Q99683 1374 aa14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 TOM1O60784 492 aa14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 ANKRD45Q5TZF3 282 aa14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 AXIN2Q9Y2T1 843 aa14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 VIRMAQ69YN4 1812 aaKnown RBP14.25□□□□□ -0.13
PCDHGA9-202ENST00000616887 RTL1A6NKG5 1358 aa14.24□□□□□ -0.13
PCDHGA9-202ENST00000616887 MEIS3Q99687 375 aa14.24□□□□□ -0.13
PCDHGA9-202ENST00000616887 LGR6Q9HBX8 967 aa14.24□□□□□ -0.13
PCDHGA9-202ENST00000616887 SLAIN2Q9P270 581 aa14.24□□□□□ -0.13
PCDHGA9-202ENST00000616887 RBM10P98175 930 aaKnown RBP14.24□□□□□ -0.13
PCDHGA9-202ENST00000616887 SLC4A10Q6U841 1118 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms