RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 SPATA31A7Q8IWB4 1347 aa15.33■□□□□ 0.04
TARDBP-217ENST00000616545 PDE3BQ13370 1112 aa15.32■□□□□ 0.04
TARDBP-217ENST00000616545 BARGINQ6ZT62 677 aa15.32■□□□□ 0.04
TARDBP-217ENST00000616545 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
TARDBP-217ENST00000616545 TRPC5Q9UL62 973 aaPredicted RBP15.31■□□□□ 0.04
TARDBP-217ENST00000616545 AFF2P51816 1311 aa15.31■□□□□ 0.04
TARDBP-217ENST00000616545 RGPD2P0DJD1 1756 aa15.31■□□□□ 0.04
TARDBP-217ENST00000616545 OVOS2A0A0G2JMS6 1433 aa15.3■□□□□ 0.04
TARDBP-217ENST00000616545 RIPK4P57078 832 aa15.3■□□□□ 0.04
TARDBP-217ENST00000616545 CALD1Q05682 793 aaKnown RBP15.3■□□□□ 0.04
TARDBP-217ENST00000616545 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
TARDBP-217ENST00000616545 YTHDC1Q96MU7 727 aaKnown RBP15.3■□□□□ 0.04
TARDBP-217ENST00000616545 MTHFSDQ2M296 383 aaKnown RBP15.29■□□□□ 0.04
TARDBP-217ENST00000616545 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
TARDBP-217ENST00000616545 DISP2A7MBM2 1401 aa15.28■□□□□ 0.04
TARDBP-217ENST00000616545 HSP90AB1P08238 724 aaKnown RBP15.28■□□□□ 0.04
TARDBP-217ENST00000616545 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
TARDBP-217ENST00000616545 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
TARDBP-217ENST00000616545 WWC1Q8IX03 1113 aa15.28■□□□□ 0.04
TARDBP-217ENST00000616545 ZCRB1Q8TBF4 217 aaKnown RBP15.28■□□□□ 0.04
TARDBP-217ENST00000616545 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
TARDBP-217ENST00000616545 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
TARDBP-217ENST00000616545 PARP4Q9UKK3 1724 aaKnown RBP15.28■□□□□ 0.04
TARDBP-217ENST00000616545 MEGF6O75095 1541 aa15.27■□□□□ 0.04
TARDBP-217ENST00000616545 ATRNO75882 1429 aa15.27■□□□□ 0.04
TARDBP-217ENST00000616545 ZNF521Q96K83 1311 aa15.27■□□□□ 0.04
TARDBP-217ENST00000616545 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.04
TARDBP-217ENST00000616545 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.04
TARDBP-217ENST00000616545 GNAT3A8MTJ3 354 aa15.27■□□□□ 0.04
TARDBP-217ENST00000616545 USP35Q9P2H5 1018 aa15.27■□□□□ 0.04
TARDBP-217ENST00000616545 MAP3K5Q99683 1374 aa15.26■□□□□ 0.03
TARDBP-217ENST00000616545 IL16Q14005 1332 aa15.26■□□□□ 0.03
TARDBP-217ENST00000616545 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
TARDBP-217ENST00000616545 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
TARDBP-217ENST00000616545 IFNL2Q8IZJ0 200 aa15.26■□□□□ 0.03
TARDBP-217ENST00000616545 GJD4Q96KN9 370 aaPredicted RBP15.26■□□□□ 0.03
TARDBP-217ENST00000616545 EXOC5O00471 708 aa15.25■□□□□ 0.03
TARDBP-217ENST00000616545 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
TARDBP-217ENST00000616545 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
TARDBP-217ENST00000616545 PKD1L3Q7Z443 1732 aa15.24■□□□□ 0.03
TARDBP-217ENST00000616545 ONECUT3O60422 494 aaPredicted RBP15.24■□□□□ 0.03
TARDBP-217ENST00000616545 GOLGA2Q08379 1002 aa15.24■□□□□ 0.03
TARDBP-217ENST00000616545 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
TARDBP-217ENST00000616545 PHKG2P15735 406 aa15.23■□□□□ 0.03
TARDBP-217ENST00000616545 SALL2Q9Y467 1007 aaPredicted RBP15.23■□□□□ 0.03
TARDBP-217ENST00000616545 E9PSI1 815 aa15.22■□□□□ 0.03
TARDBP-217ENST00000616545 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
TARDBP-217ENST00000616545 DDB1Q16531 1140 aa15.22■□□□□ 0.03
TARDBP-217ENST00000616545 DCAF5Q96JK2 942 aa15.22■□□□□ 0.03
TARDBP-217ENST00000616545 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
TARDBP-217ENST00000616545 TNS2Q63HR2 1409 aa15.21■□□□□ 0.03
TARDBP-217ENST00000616545 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
TARDBP-217ENST00000616545 MYH16Q9H6N6 1097 aa15.21■□□□□ 0.03
TARDBP-217ENST00000616545 WNK3Q9BYP7 1800 aa15.21■□□□□ 0.03
TARDBP-217ENST00000616545 CEMIPQ8WUJ3 1361 aa15.21■□□□□ 0.02
TARDBP-217ENST00000616545 CYP27B1O15528 508 aa15.2■□□□□ 0.02
TARDBP-217ENST00000616545 GNAI1P63096 354 aa15.2■□□□□ 0.02
TARDBP-217ENST00000616545 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
TARDBP-217ENST00000616545 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
TARDBP-217ENST00000616545 IFT57Q9NWB7 429 aa15.19■□□□□ 0.02
TARDBP-217ENST00000616545 DLG5Q8TDM6 1919 aa15.19■□□□□ 0.02
TARDBP-217ENST00000616545 ERVV-2B6SEH9 535 aa15.18■□□□□ 0.02
TARDBP-217ENST00000616545 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
TARDBP-217ENST00000616545 SLFN5Q08AF3 891 aa15.18■□□□□ 0.02
TARDBP-217ENST00000616545 IL17REQ8NFR9 667 aa15.18■□□□□ 0.02
TARDBP-217ENST00000616545 CFAP44Q96MT7 982 aa15.18■□□□□ 0.02
TARDBP-217ENST00000616545 GLI3P10071 1580 aa15.18■□□□□ 0.02
TARDBP-217ENST00000616545 TEFQ10587 303 aa15.17■□□□□ 0.02
TARDBP-217ENST00000616545 MCM10Q7L590 875 aa15.17■□□□□ 0.02
TARDBP-217ENST00000616545 ILDR1Q86SU0 546 aaPredicted RBP15.17■□□□□ 0.02
TARDBP-217ENST00000616545 TRMT2AQ8IZ69 625 aaKnown RBP15.17■□□□□ 0.02
TARDBP-217ENST00000616545 DDX54Q8TDD1 881 aaKnown RBP15.17■□□□□ 0.02
TARDBP-217ENST00000616545 ADAMTS7Q9UKP4 1686 aa15.16■□□□□ 0.02
TARDBP-217ENST00000616545 THSD7AQ9UPZ6 1657 aa15.16■□□□□ 0.02
TARDBP-217ENST00000616545 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
TARDBP-217ENST00000616545 TAF7Q15545 349 aaPredicted RBP15.16■□□□□ 0.02
TARDBP-217ENST00000616545 MPRIPQ6WCQ1 1025 aa15.16■□□□□ 0.02
TARDBP-217ENST00000616545 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
TARDBP-217ENST00000616545 CHL1O00533 1208 aa15.15■□□□□ 0.02
TARDBP-217ENST00000616545 RXRBP28702 533 aa15.15■□□□□ 0.02
TARDBP-217ENST00000616545 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
TARDBP-217ENST00000616545 LRRC37A3O60309 1634 aa15.14■□□□□ 0.01
TARDBP-217ENST00000616545 A0A0G2JS52 829 aa15.14■□□□□ 0.01
TARDBP-217ENST00000616545 CT47B1P0C2W7 299 aaPredicted RBP15.14■□□□□ 0.01
TARDBP-217ENST00000616545 MYT1Q01538 1121 aa15.14■□□□□ 0.01
TARDBP-217ENST00000616545 SLC52A2Q9HAB3 445 aa15.14■□□□□ 0.01
TARDBP-217ENST00000616545 LGR6Q9HBX8 967 aa15.14■□□□□ 0.01
TARDBP-217ENST00000616545 BCL9O00512 1426 aa15.14■□□□□ 0.01
TARDBP-217ENST00000616545 KDM6AO15550 1401 aaPredicted RBP15.13■□□□□ 0.01
TARDBP-217ENST00000616545 DUSP27Q5VZP5 1158 aa15.13■□□□□ 0.01
TARDBP-217ENST00000616545 SEPT12Q8IYM1 358 aa15.13■□□□□ 0.01
TARDBP-217ENST00000616545 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
TARDBP-217ENST00000616545 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
TARDBP-217ENST00000616545 SHANK3Q9BYB0 1731 aa15.13■□□□□ 0.01
TARDBP-217ENST00000616545 MRC1P22897 1456 aa15.13■□□□□ 0.01
TARDBP-217ENST00000616545 CABP4P57796 275 aa15.12■□□□□ 0.01
TARDBP-217ENST00000616545 CHMP4AQ9BY43 222 aa15.12■□□□□ 0.01
TARDBP-217ENST00000616545 SOS1Q07889 1333 aaPredicted RBP15.12■□□□□ 0.01
TARDBP-217ENST00000616545 SCN11AQ9UI33 1791 aa15.11■□□□□ 0.01
TARDBP-217ENST00000616545 MARCH10Q8NA82 808 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms