RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 HIC1Q14526 733 aa10.62□□□□□ -0.71
MALAT1-208ENST00000616527 FBXO31Q5XUX0 539 aaPredicted RBP10.62□□□□□ -0.71
MALAT1-208ENST00000616527 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
MALAT1-208ENST00000616527 ADGRG1Q9Y653 693 aa10.62□□□□□ -0.71
MALAT1-208ENST00000616527 A2ML1A8K2U0 1454 aa10.61□□□□□ -0.71
MALAT1-208ENST00000616527 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
MALAT1-208ENST00000616527 HNRNPUQ00839 825 aaKnown RBP eCLIP10.61□□□□□ -0.711e-323■□□□□ 8.4
MALAT1-208ENST00000616527 RBM46Q8TBY0 533 aaKnown RBP10.61□□□□□ -0.71
MALAT1-208ENST00000616527 TMC1Q8TDI8 760 aa10.61□□□□□ -0.71
MALAT1-208ENST00000616527 ZC3H15Q8WU90 426 aaKnown RBP10.61□□□□□ -0.71
MALAT1-208ENST00000616527 KNSTRNQ9Y448 316 aa10.61□□□□□ -0.71
MALAT1-208ENST00000616527 SWT1Q5T5J6 900 aaKnown RBP10.6□□□□□ -0.71
MALAT1-208ENST00000616527 ESF1Q9H501 851 aaKnown RBP10.6□□□□□ -0.71
MALAT1-208ENST00000616527 NINLQ9Y2I6 1382 aa10.6□□□□□ -0.71
MALAT1-208ENST00000616527 KDM5AP29375 1690 aaKnown RBP10.6□□□□□ -0.71
MALAT1-208ENST00000616527 SIRT1Q96EB6 747 aa10.59□□□□□ -0.71
MALAT1-208ENST00000616527 ASXL1Q8IXJ9 1541 aa10.58□□□□□ -0.72
MALAT1-208ENST00000616527 CLTCQ00610 1675 aaKnown RBP10.58□□□□□ -0.72
MALAT1-208ENST00000616527 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
MALAT1-208ENST00000616527 DLC1Q96QB1 1528 aa10.58□□□□□ -0.72
MALAT1-208ENST00000616527 EVC2Q86UK5 1308 aa10.58□□□□□ -0.72
MALAT1-208ENST00000616527 TNRQ92752 1358 aa10.57□□□□□ -0.72
MALAT1-208ENST00000616527 RNF40O75150 1001 aa10.57□□□□□ -0.72
MALAT1-208ENST00000616527 DNAJB2P25686 324 aa10.57□□□□□ -0.72
MALAT1-208ENST00000616527 SLC4A3P48751 1232 aa10.57□□□□□ -0.72
MALAT1-208ENST00000616527 FAM9BQ8IZU0 186 aa10.57□□□□□ -0.72
MALAT1-208ENST00000616527 NECTIN2Q92692 538 aa10.57□□□□□ -0.72
MALAT1-208ENST00000616527 TRAK1Q9UPV9 953 aa10.57□□□□□ -0.72
MALAT1-208ENST00000616527 RIMS2Q9UQ26 1411 aa10.57□□□□□ -0.72
MALAT1-208ENST00000616527 CFAP65Q6ZU64 1925 aaKnown RBP10.56□□□□□ -0.72
MALAT1-208ENST00000616527 NLRP1Q9C000 1473 aa10.56□□□□□ -0.72
MALAT1-208ENST00000616527 ABCC11Q96J66 1382 aa10.56□□□□□ -0.72
MALAT1-208ENST00000616527 GNPATO15228 680 aa10.56□□□□□ -0.72
MALAT1-208ENST00000616527 GPR37O15354 613 aa10.56□□□□□ -0.72
MALAT1-208ENST00000616527 FAM161AQ3B820 660 aa10.56□□□□□ -0.72
MALAT1-208ENST00000616527 ERICH6BQ5W0A0 696 aa10.56□□□□□ -0.72
MALAT1-208ENST00000616527 YTHDC2Q9H6S0 1430 aaKnown RBP10.56□□□□□ -0.72
MALAT1-208ENST00000616527 OATP04181 439 aa10.55□□□□□ -0.72
MALAT1-208ENST00000616527 TMEM132EQ6IEE7 984 aa10.55□□□□□ -0.72
MALAT1-208ENST00000616527 ALKQ9UM73 1620 aa10.55□□□□□ -0.72
MALAT1-208ENST00000616527 MYOM1P52179 1685 aa10.54□□□□□ -0.72
MALAT1-208ENST00000616527 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
MALAT1-208ENST00000616527 KCNC4Q03721 635 aa10.54□□□□□ -0.72
MALAT1-208ENST00000616527 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
MALAT1-208ENST00000616527 TMEM134Q9H6X4 195 aa10.54□□□□□ -0.72
MALAT1-208ENST00000616527 PTPRMP28827 1452 aa10.54□□□□□ -0.72
MALAT1-208ENST00000616527 NSD2O96028 1365 aa10.53□□□□□ -0.72
MALAT1-208ENST00000616527 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
MALAT1-208ENST00000616527 SMG6Q86US8 1419 aaKnown RBP10.53□□□□□ -0.72
MALAT1-208ENST00000616527 A0A0G2JS52 829 aa10.53□□□□□ -0.72
MALAT1-208ENST00000616527 PPP2R1AP30153 589 aa10.53□□□□□ -0.72
MALAT1-208ENST00000616527 PDE3BQ13370 1112 aa10.53□□□□□ -0.72
MALAT1-208ENST00000616527 MLECQ14165 292 aa10.53□□□□□ -0.72
MALAT1-208ENST00000616527 ARHGEF28Q8N1W1 1705 aaKnown RBP10.53□□□□□ -0.72
MALAT1-208ENST00000616527 ANKRD36BQ8N2N9 1353 aa10.52□□□□□ -0.72
MALAT1-208ENST00000616527 TMEM2Q9UHN6 1383 aa10.52□□□□□ -0.72
MALAT1-208ENST00000616527 TECPR2O15040 1411 aa10.52□□□□□ -0.73
MALAT1-208ENST00000616527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.52□□□□□ -0.73
MALAT1-208ENST00000616527 FECHP22830 423 aa10.52□□□□□ -0.73
MALAT1-208ENST00000616527 CC2D1BQ5T0F9 858 aaKnown RBP10.52□□□□□ -0.73
MALAT1-208ENST00000616527 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
MALAT1-208ENST00000616527 CARD14Q9BXL6 1004 aa10.52□□□□□ -0.73
MALAT1-208ENST00000616527 SUPT16HQ9Y5B9 1047 aaKnown RBP10.52□□□□□ -0.73
MALAT1-208ENST00000616527 QRICH2Q9H0J4 1663 aa10.52□□□□□ -0.73
MALAT1-208ENST00000616527 USP32Q8NFA0 1604 aa10.51□□□□□ -0.73
MALAT1-208ENST00000616527 BLMP54132 1417 aaPredicted RBP10.51□□□□□ -0.73
MALAT1-208ENST00000616527 FAM135BQ49AJ0 1406 aa10.51□□□□□ -0.73
MALAT1-208ENST00000616527 NEFLP07196 543 aa10.51□□□□□ -0.73
MALAT1-208ENST00000616527 APLP1P51693 650 aa10.51□□□□□ -0.73
MALAT1-208ENST00000616527 NGEFQ8N5V2 710 aa10.51□□□□□ -0.73
MALAT1-208ENST00000616527 SLC24A3Q9HC58 644 aa10.51□□□□□ -0.73
MALAT1-208ENST00000616527 TULP4Q9NRJ4 1543 aa10.51□□□□□ -0.73
MALAT1-208ENST00000616527 TJAP1Q5JTD0 557 aa10.5□□□□□ -0.73
MALAT1-208ENST00000616527 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
MALAT1-208ENST00000616527 CGNL1Q0VF96 1302 aa10.5□□□□□ -0.73
MALAT1-208ENST00000616527 NUTM2DQ5VT03 806 aaPredicted RBP10.49□□□□□ -0.73
MALAT1-208ENST00000616527 POLR3AO14802 1390 aaPredicted RBP10.49□□□□□ -0.73
MALAT1-208ENST00000616527 PLEKHG1Q9ULL1 1385 aa10.49□□□□□ -0.73
MALAT1-208ENST00000616527 MYO5BQ9ULV0 1848 aa10.49□□□□□ -0.73
MALAT1-208ENST00000616527 ARHGAP23Q9P227 1491 aa10.49□□□□□ -0.73
MALAT1-208ENST00000616527 ZMYND10O75800 440 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 RGS20O76081 388 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 PRAM1Q96QH2 718 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 MTRQ99707 1265 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 SLC12A5Q9H2X9 1139 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 POGKQ9P215 609 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 NUDCQ9Y266 331 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 RNF123Q5XPI4 1314 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 MED14O60244 1454 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 SLIT1O75093 1534 aa10.48□□□□□ -0.73
MALAT1-208ENST00000616527 SETD1AO15047 1707 aaKnown RBP10.47□□□□□ -0.73
MALAT1-208ENST00000616527 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
MALAT1-208ENST00000616527 PRR14Q9BWN1 585 aa10.47□□□□□ -0.73
MALAT1-208ENST00000616527 IL21Q9HBE4 155 aa10.47□□□□□ -0.73
MALAT1-208ENST00000616527 NSD3Q9BZ95 1437 aa10.47□□□□□ -0.73
MALAT1-208ENST00000616527 TERF2IPQ9NYB0 399 aa10.46□□□□□ -0.73
MALAT1-208ENST00000616527 NRXN3Q9Y4C0 1643 aa10.46□□□□□ -0.74
MALAT1-208ENST00000616527 UBR1Q8IWV7 1749 aa10.45□□□□□ -0.74
MALAT1-208ENST00000616527 ADAMTS13Q76LX8 1427 aa10.45□□□□□ -0.74
MALAT1-208ENST00000616527 THEMISQ8N1K5 641 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms