RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 PLSCR2Q9NRY7 297 aa14.55□□□□□ -0.08
MMP28-206ENST00000616383 IGSF1Q8N6C5 1336 aa14.55□□□□□ -0.08
MMP28-206ENST00000616383 COL5A2P05997 1499 aaPredicted RBP14.55□□□□□ -0.08
MMP28-206ENST00000616383 HMOX1P09601 288 aa14.54□□□□□ -0.08
MMP28-206ENST00000616383 ANKRD24Q8TF21 1146 aa14.54□□□□□ -0.08
MMP28-206ENST00000616383 EYA1Q99502 592 aa14.54□□□□□ -0.08
MMP28-206ENST00000616383 RSPH6AQ9H0K4 717 aa14.54□□□□□ -0.08
MMP28-206ENST00000616383 ERBB3P21860 1342 aa14.54□□□□□ -0.08
MMP28-206ENST00000616383 WNK3Q9BYP7 1800 aa14.53□□□□□ -0.08
MMP28-206ENST00000616383 LRP6O75581 1613 aa14.53□□□□□ -0.08
MMP28-206ENST00000616383 NCAPD2Q15021 1401 aa14.53□□□□□ -0.08
MMP28-206ENST00000616383 KDRP35968 1356 aa14.53□□□□□ -0.08
MMP28-206ENST00000616383 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
MMP28-206ENST00000616383 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
MMP28-206ENST00000616383 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
MMP28-206ENST00000616383 AEBP1Q8IUX7 1158 aa14.53□□□□□ -0.08
MMP28-206ENST00000616383 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
MMP28-206ENST00000616383 RGS17Q9UGC6 210 aaPredicted RBP14.53□□□□□ -0.08
MMP28-206ENST00000616383 FCHSD2O94868 740 aa14.52□□□□□ -0.09
MMP28-206ENST00000616383 ADAMTS2O95450 1211 aa14.52□□□□□ -0.09
MMP28-206ENST00000616383 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
MMP28-206ENST00000616383 SULT6B1Q6IMI4 303 aa14.52□□□□□ -0.09
MMP28-206ENST00000616383 RUNDC1Q96C34 613 aa14.52□□□□□ -0.09
MMP28-206ENST00000616383 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
MMP28-206ENST00000616383 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
MMP28-206ENST00000616383 FAM83GA6ND36 823 aa14.51□□□□□ -0.09
MMP28-206ENST00000616383 PRKAR2BP31323 418 aa14.51□□□□□ -0.09
MMP28-206ENST00000616383 PARP4Q9UKK3 1724 aaKnown RBP14.51□□□□□ -0.09
MMP28-206ENST00000616383 VIRMAQ69YN4 1812 aaKnown RBP14.5□□□□□ -0.09
MMP28-206ENST00000616383 NBPF6Q5VWK0 638 aa14.5□□□□□ -0.09
MMP28-206ENST00000616383 USHBP1Q8N6Y0 703 aa14.5□□□□□ -0.09
MMP28-206ENST00000616383 NBPF4Q96M43 638 aa14.5□□□□□ -0.09
MMP28-206ENST00000616383 PLEKHF1Q96S99 279 aa14.5□□□□□ -0.09
MMP28-206ENST00000616383 PNNQ9H307 717 aaKnown RBP14.5□□□□□ -0.09
MMP28-206ENST00000616383 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.49□□□□□ -0.09
MMP28-206ENST00000616383 ZBED9Q6R2W3 1325 aa14.49□□□□□ -0.09
MMP28-206ENST00000616383 WDR17Q8IZU2 1322 aa14.49□□□□□ -0.09
MMP28-206ENST00000616383 APAF1O14727 1248 aa14.49□□□□□ -0.09
MMP28-206ENST00000616383 CSB-PGBD3P0DP91 1061 aa14.49□□□□□ -0.09
MMP28-206ENST00000616383 TSPYL2Q9H2G4 693 aaPredicted RBP14.49□□□□□ -0.09
MMP28-206ENST00000616383 PKD1L3Q7Z443 1732 aa14.49□□□□□ -0.09
MMP28-206ENST00000616383 TCP11L2Q8N4U5 519 aa14.48□□□□□ -0.09
MMP28-206ENST00000616383 NLRP2Q9NX02 1062 aa14.48□□□□□ -0.09
MMP28-206ENST00000616383 BTG4Q9NY30 223 aa14.48□□□□□ -0.09
MMP28-206ENST00000616383 SLIT2O94813 1529 aa14.47□□□□□ -0.09
MMP28-206ENST00000616383 NEFMP07197 916 aa14.47□□□□□ -0.09
MMP28-206ENST00000616383 OTUD5Q96G74 571 aa14.47□□□□□ -0.09
MMP28-206ENST00000616383 SALL2Q9Y467 1007 aaPredicted RBP14.47□□□□□ -0.09
MMP28-206ENST00000616383 POTEAQ6S8J7 498 aa14.46□□□□□ -0.09
MMP28-206ENST00000616383 MS4A3Q96HJ5 214 aa14.46□□□□□ -0.09
MMP28-206ENST00000616383 PHACTR3Q96KR7 559 aa14.46□□□□□ -0.09
MMP28-206ENST00000616383 STRN4Q9NRL3 753 aa14.46□□□□□ -0.09
MMP28-206ENST00000616383 RRP7AQ9Y3A4 280 aaKnown RBP14.46□□□□□ -0.09
MMP28-206ENST00000616383 CRB1P82279 1406 aa14.46□□□□□ -0.09
MMP28-206ENST00000616383 MEGF6O75095 1541 aa14.46□□□□□ -0.1
MMP28-206ENST00000616383 EVA1CP58658 441 aa14.45□□□□□ -0.1
MMP28-206ENST00000616383 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
MMP28-206ENST00000616383 TMPOP42166 694 aaKnown RBP14.44□□□□□ -0.1
MMP28-206ENST00000616383 LARP1Q6PKG0 1096 aaKnown RBP14.44□□□□□ -0.1
MMP28-206ENST00000616383 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
MMP28-206ENST00000616383 POTEB2H3BUK9 544 aa14.43□□□□□ -0.1
MMP28-206ENST00000616383 NEUROD2Q15784 382 aa14.43□□□□□ -0.1
MMP28-206ENST00000616383 NFE2L2Q16236 605 aa14.43□□□□□ -0.1
MMP28-206ENST00000616383 NGEFQ8N5V2 710 aa14.43□□□□□ -0.1
MMP28-206ENST00000616383 LRRC37A3O60309 1634 aa14.43□□□□□ -0.1
MMP28-206ENST00000616383 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
MMP28-206ENST00000616383 C8orf37Q96NL8 207 aa14.42□□□□□ -0.1
MMP28-206ENST00000616383 CARD10Q9BWT7 1032 aa14.42□□□□□ -0.1
MMP28-206ENST00000616383 MEX3CQ5U5Q3 659 aaKnown RBP14.41□□□□□ -0.1
MMP28-206ENST00000616383 NGLY1Q96IV0 654 aa14.41□□□□□ -0.1
MMP28-206ENST00000616383 METRNQ9UJH8 293 aa14.41□□□□□ -0.1
MMP28-206ENST00000616383 OVOS2A0A0G2JMS6 1433 aa14.41□□□□□ -0.1
MMP28-206ENST00000616383 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
MMP28-206ENST00000616383 BCL9LQ86UU0 1499 aa14.4□□□□□ -0.1
MMP28-206ENST00000616383 PLEKHG2Q9H7P9 1386 aa14.4□□□□□ -0.1
MMP28-206ENST00000616383 RIPK4P57078 832 aa14.4□□□□□ -0.1
MMP28-206ENST00000616383 MTHFSDQ2M296 383 aaKnown RBP14.4□□□□□ -0.1
MMP28-206ENST00000616383 RAPGEF4Q8WZA2 1011 aa14.4□□□□□ -0.1
MMP28-206ENST00000616383 SCN11AQ9UI33 1791 aa14.39□□□□□ -0.11
MMP28-206ENST00000616383 CENPBP07199 599 aaPredicted RBP14.39□□□□□ -0.11
MMP28-206ENST00000616383 CCDC27Q2M243 656 aa14.39□□□□□ -0.11
MMP28-206ENST00000616383 GAS2L2Q8NHY3 880 aa14.39□□□□□ -0.11
MMP28-206ENST00000616383 ADAMTS7Q9UKP4 1686 aa14.39□□□□□ -0.11
MMP28-206ENST00000616383 TATP17735 454 aaPredicted RBP14.38□□□□□ -0.11
MMP28-206ENST00000616383 WWC1Q8IX03 1113 aa14.38□□□□□ -0.11
MMP28-206ENST00000616383 TRIM35Q9UPQ4 493 aa14.38□□□□□ -0.11
MMP28-206ENST00000616383 DISP2A7MBM2 1401 aa14.38□□□□□ -0.11
MMP28-206ENST00000616383 MAP3K5Q99683 1374 aa14.37□□□□□ -0.11
MMP28-206ENST00000616383 PLEKHO1Q53GL0 409 aaPredicted RBP14.37□□□□□ -0.11
MMP28-206ENST00000616383 UNC5CLQ8IV45 518 aa14.37□□□□□ -0.11
MMP28-206ENST00000616383 FNBP4Q8N3X1 1017 aaPredicted RBP14.37□□□□□ -0.11
MMP28-206ENST00000616383 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
MMP28-206ENST00000616383 SIPA1L3O60292 1781 aaPredicted RBP14.37□□□□□ -0.11
MMP28-206ENST00000616383 GLI3P10071 1580 aa14.36□□□□□ -0.11
MMP28-206ENST00000616383 IL2RBP14784 551 aa14.36□□□□□ -0.11
MMP28-206ENST00000616383 LMOD3Q0VAK6 560 aa14.36□□□□□ -0.11
MMP28-206ENST00000616383 PDE3BQ13370 1112 aa14.36□□□□□ -0.11
MMP28-206ENST00000616383 AMOTQ4VCS5 1084 aa14.36□□□□□ -0.11
MMP28-206ENST00000616383 ZNF530Q6P9A1 599 aaPredicted RBP14.36□□□□□ -0.11
MMP28-206ENST00000616383 SLC39A7Q92504 469 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms