RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
AL353770.3-201ENST00000616253 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
AL353770.3-201ENST00000616253 CAMTA1Q9Y6Y1 1673 aa12.87□□□□□ -0.35
AL353770.3-201ENST00000616253 RLBP1P12271 317 aa12.87□□□□□ -0.35
AL353770.3-201ENST00000616253 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
AL353770.3-201ENST00000616253 TSPYL6Q8N831 410 aa12.87□□□□□ -0.35
AL353770.3-201ENST00000616253 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
AL353770.3-201ENST00000616253 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
AL353770.3-201ENST00000616253 LRRC59Q96AG4 307 aaKnown RBP12.86□□□□□ -0.35
AL353770.3-201ENST00000616253 ZNF428Q96B54 188 aa12.86□□□□□ -0.35
AL353770.3-201ENST00000616253 SPATA31A3Q5VYP0 1347 aa12.86□□□□□ -0.35
AL353770.3-201ENST00000616253 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 PIP4K2BP78356 416 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 CLUAP1Q96AJ1 413 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 SLAIN2Q9P270 581 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 MAP3K5Q99683 1374 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 CHL1O00533 1208 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 VAMP4O75379 141 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 TWISTNBQ3B726 338 aaPredicted RBP12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 AXIN2Q9Y2T1 843 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 COL18A1P39060 1754 aa12.85□□□□□ -0.35
AL353770.3-201ENST00000616253 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
AL353770.3-201ENST00000616253 TRIM27P14373 513 aa12.84□□□□□ -0.35
AL353770.3-201ENST00000616253 FTSJ3Q8IY81 847 aaKnown RBP12.84□□□□□ -0.35
AL353770.3-201ENST00000616253 C8orf58Q8NAV2 365 aa12.84□□□□□ -0.35
AL353770.3-201ENST00000616253 NOB1Q9ULX3 412 aaKnown RBP12.84□□□□□ -0.35
AL353770.3-201ENST00000616253 KDM2BQ8NHM5 1336 aa12.83□□□□□ -0.35
AL353770.3-201ENST00000616253 GNAT3A8MTJ3 354 aa12.83□□□□□ -0.35
AL353770.3-201ENST00000616253 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.35
AL353770.3-201ENST00000616253 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.35
AL353770.3-201ENST00000616253 DZIP1LQ8IYY4 767 aaKnown RBP12.83□□□□□ -0.35
AL353770.3-201ENST00000616253 CABLES1Q8TDN4 633 aa12.83□□□□□ -0.35
AL353770.3-201ENST00000616253 LMO7Q8WWI1 1683 aa12.83□□□□□ -0.36
AL353770.3-201ENST00000616253 MS4A1P11836 297 aa12.83□□□□□ -0.36
AL353770.3-201ENST00000616253 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.36
AL353770.3-201ENST00000616253 ABCC6O95255 1503 aa12.82□□□□□ -0.36
AL353770.3-201ENST00000616253 ERBB3P21860 1342 aa12.82□□□□□ -0.36
AL353770.3-201ENST00000616253 BRPF1P55201 1214 aaPredicted RBP12.82□□□□□ -0.36
AL353770.3-201ENST00000616253 SOS2Q07890 1332 aaPredicted RBP12.82□□□□□ -0.36
AL353770.3-201ENST00000616253 IPO8O15397 1037 aaKnown RBP12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 MVPQ14764 893 aaKnown RBP12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 CENPQQ7L2Z9 268 aaPredicted RBP12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 MRPL50Q8N5N7 158 aaKnown RBP12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 ABCA3Q99758 1704 aa12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 FAM208AQ9UK61 1670 aaKnown RBP12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 KIAA0232Q92628 1395 aa12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 KRT24Q2M2I5 525 aa12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 TSPYL4Q9UJ04 414 aa12.81□□□□□ -0.36
AL353770.3-201ENST00000616253 MIS18AQ9NYP9 233 aa12.8□□□□□ -0.36
AL353770.3-201ENST00000616253 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
AL353770.3-201ENST00000616253 AAMPQ13685 434 aa12.8□□□□□ -0.36
AL353770.3-201ENST00000616253 IL17REQ8NFR9 667 aa12.8□□□□□ -0.36
AL353770.3-201ENST00000616253 CPDO75976 1380 aa12.79□□□□□ -0.36
AL353770.3-201ENST00000616253 CHRNA2Q15822 529 aa12.79□□□□□ -0.36
AL353770.3-201ENST00000616253 ITPRIPQ8IWB1 547 aa12.79□□□□□ -0.36
AL353770.3-201ENST00000616253 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
AL353770.3-201ENST00000616253 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
AL353770.3-201ENST00000616253 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
AL353770.3-201ENST00000616253 AMOTQ4VCS5 1084 aa12.78□□□□□ -0.36
AL353770.3-201ENST00000616253 TMEM57Q8N5G2 664 aa12.78□□□□□ -0.36
AL353770.3-201ENST00000616253 CEMIPQ8WUJ3 1361 aa12.77□□□□□ -0.36
AL353770.3-201ENST00000616253 ARHGAP45Q92619 1136 aa12.77□□□□□ -0.37
AL353770.3-201ENST00000616253 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.37
AL353770.3-201ENST00000616253 DDX19BQ9UMR2 479 aa12.77□□□□□ -0.37
AL353770.3-201ENST00000616253 AKAP4Q5JQC9 854 aa12.76□□□□□ -0.37
AL353770.3-201ENST00000616253 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
AL353770.3-201ENST00000616253 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
AL353770.3-201ENST00000616253 KDM3BQ7LBC6 1761 aa12.76□□□□□ -0.37
AL353770.3-201ENST00000616253 IGHDP01880 384 aa12.76□□□□□ -0.37
AL353770.3-201ENST00000616253 CSB-PGBD3P0DP91 1061 aa12.76□□□□□ -0.37
AL353770.3-201ENST00000616253 PCDHB15Q9Y5E8 787 aa12.76□□□□□ -0.37
AL353770.3-201ENST00000616253 ROBO1Q9Y6N7 1651 aa12.75□□□□□ -0.37
AL353770.3-201ENST00000616253 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
AL353770.3-201ENST00000616253 BABAM1Q9NWV8 329 aa12.75□□□□□ -0.37
AL353770.3-201ENST00000616253 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
AL353770.3-201ENST00000616253 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
AL353770.3-201ENST00000616253 MEGF6O75095 1541 aa12.74□□□□□ -0.37
AL353770.3-201ENST00000616253 ABCC4O15439 1325 aa12.74□□□□□ -0.37
AL353770.3-201ENST00000616253 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
AL353770.3-201ENST00000616253 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
AL353770.3-201ENST00000616253 PRDM11Q9NQV5 511 aa12.74□□□□□ -0.37
AL353770.3-201ENST00000616253 OVOS2A0A0G2JMS6 1433 aa12.74□□□□□ -0.37
AL353770.3-201ENST00000616253 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
AL353770.3-201ENST00000616253 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
AL353770.3-201ENST00000616253 SIPA1L3O60292 1781 aaPredicted RBP12.72□□□□□ -0.37
AL353770.3-201ENST00000616253 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
AL353770.3-201ENST00000616253 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
AL353770.3-201ENST00000616253 RGS12O14924 1447 aa12.72□□□□□ -0.37
AL353770.3-201ENST00000616253 RNMTO43148 476 aaKnown RBP12.72□□□□□ -0.37
AL353770.3-201ENST00000616253 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
AL353770.3-201ENST00000616253 TEFQ10587 303 aa12.71□□□□□ -0.37
AL353770.3-201ENST00000616253 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.37
AL353770.3-201ENST00000616253 RGS17Q9UGC6 210 aaPredicted RBP12.71□□□□□ -0.37
AL353770.3-201ENST00000616253 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
AL353770.3-201ENST00000616253 AHDC1Q5TGY3 1603 aaPredicted RBP12.71□□□□□ -0.37
AL353770.3-201ENST00000616253 COL5A2P05997 1499 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms