RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 POLR3GLQ9BT43 218 aa14.7□□□□□ -0.06
COL4A1-205ENST00000615732 LRRC4BQ9NT99 713 aa14.7□□□□□ -0.06
COL4A1-205ENST00000615732 TUBGCP6Q96RT7 1819 aa14.7□□□□□ -0.06
COL4A1-205ENST00000615732 COL24A1Q17RW2 1714 aa14.69□□□□□ -0.06
COL4A1-205ENST00000615732 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
COL4A1-205ENST00000615732 SHANK3Q9BYB0 1731 aa14.69□□□□□ -0.06
COL4A1-205ENST00000615732 GOLGB1Q14789 3259 aaKnown RBP14.68□□□□□ -0.06
COL4A1-205ENST00000615732 MAP3K19Q56UN5 1328 aa14.68□□□□□ -0.06
COL4A1-205ENST00000615732 DDX54Q8TDD1 881 aaKnown RBP14.68□□□□□ -0.06
COL4A1-205ENST00000615732 IP6K1Q92551 441 aa14.68□□□□□ -0.06
COL4A1-205ENST00000615732 COG3Q96JB2 828 aa14.68□□□□□ -0.06
COL4A1-205ENST00000615732 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
COL4A1-205ENST00000615732 ANKRD36BQ8N2N9 1353 aa14.67□□□□□ -0.06
COL4A1-205ENST00000615732 MEGF6O75095 1541 aa14.66□□□□□ -0.06
COL4A1-205ENST00000615732 HOXC9P31274 260 aa14.66□□□□□ -0.06
COL4A1-205ENST00000615732 PUS7Q96PZ0 661 aaKnown RBP14.66□□□□□ -0.06
COL4A1-205ENST00000615732 LY75O60449 1722 aa14.66□□□□□ -0.06
COL4A1-205ENST00000615732 NSD2O96028 1365 aa14.65□□□□□ -0.06
COL4A1-205ENST00000615732 AMPHP49418 695 aa14.65□□□□□ -0.06
COL4A1-205ENST00000615732 RRS1Q15050 365 aaKnown RBP14.65□□□□□ -0.06
COL4A1-205ENST00000615732 RGPD2P0DJD1 1756 aa14.65□□□□□ -0.06
COL4A1-205ENST00000615732 PNPLA7Q6ZV29 1317 aa14.65□□□□□ -0.06
COL4A1-205ENST00000615732 KAT6BQ8WYB5 2073 aa14.64□□□□□ -0.07
COL4A1-205ENST00000615732 CCER2I3L3R5 266 aa14.64□□□□□ -0.07
COL4A1-205ENST00000615732 KCNQ4P56696 695 aa14.64□□□□□ -0.07
COL4A1-205ENST00000615732 SLC27A3Q5K4L6 730 aa14.64□□□□□ -0.07
COL4A1-205ENST00000615732 USHBP1Q8N6Y0 703 aa14.64□□□□□ -0.07
COL4A1-205ENST00000615732 SYTL4Q96C24 671 aaPredicted RBP14.64□□□□□ -0.07
COL4A1-205ENST00000615732 GGNBP2Q9H3C7 697 aa14.64□□□□□ -0.07
COL4A1-205ENST00000615732 RTL1A6NKG5 1358 aa14.62□□□□□ -0.07
COL4A1-205ENST00000615732 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
COL4A1-205ENST00000615732 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
COL4A1-205ENST00000615732 TMF1P82094 1093 aa14.61□□□□□ -0.07
COL4A1-205ENST00000615732 SLC16A10Q8TF71 515 aa14.61□□□□□ -0.07
COL4A1-205ENST00000615732 SENP3-EIF4A1A0A087X0R7 540 aa14.6□□□□□ -0.07
COL4A1-205ENST00000615732 POLD1P28340 1107 aa14.6□□□□□ -0.07
COL4A1-205ENST00000615732 C1QTNF8P60827 252 aa14.6□□□□□ -0.07
COL4A1-205ENST00000615732 GPR162Q16538 588 aa14.6□□□□□ -0.07
COL4A1-205ENST00000615732 SMG6Q86US8 1419 aaKnown RBP14.59□□□□□ -0.07
COL4A1-205ENST00000615732 FYB1O15117 783 aa14.59□□□□□ -0.07
COL4A1-205ENST00000615732 NBPF6Q5VWK0 638 aa14.59□□□□□ -0.07
COL4A1-205ENST00000615732 NLGN2Q8NFZ4 835 aa14.59□□□□□ -0.07
COL4A1-205ENST00000615732 ZCRB1Q8TBF4 217 aaKnown RBP14.59□□□□□ -0.07
COL4A1-205ENST00000615732 NBPF4Q96M43 638 aa14.59□□□□□ -0.07
COL4A1-205ENST00000615732 TFCP2L1Q9NZI6 479 aa14.59□□□□□ -0.07
COL4A1-205ENST00000615732 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
COL4A1-205ENST00000615732 C5P01031 1676 aa14.57□□□□□ -0.08
COL4A1-205ENST00000615732 KIF20BQ96Q89 1820 aa14.57□□□□□ -0.08
COL4A1-205ENST00000615732 NSD3Q9BZ95 1437 aa14.57□□□□□ -0.08
COL4A1-205ENST00000615732 HSP90AB2PQ58FF8 381 aa14.56□□□□□ -0.08
COL4A1-205ENST00000615732 CCNL1Q9UK58 526 aaPredicted RBP14.56□□□□□ -0.08
COL4A1-205ENST00000615732 SLC24A1O60721 1099 aa14.55□□□□□ -0.08
COL4A1-205ENST00000615732 CDCA8Q53HL2 280 aa14.55□□□□□ -0.08
COL4A1-205ENST00000615732 RAPGEF4Q8WZA2 1011 aa14.55□□□□□ -0.08
COL4A1-205ENST00000615732 FLT4P35916 1363 aa14.55□□□□□ -0.08
COL4A1-205ENST00000615732 COL23A1Q86Y22 540 aaPredicted RBP14.54□□□□□ -0.08
COL4A1-205ENST00000615732 EMILIN1Q9Y6C2 1016 aa14.54□□□□□ -0.08
COL4A1-205ENST00000615732 INSRP06213 1382 aa14.54□□□□□ -0.08
COL4A1-205ENST00000615732 TOGARAM1Q9Y4F4 1720 aa14.53□□□□□ -0.08
COL4A1-205ENST00000615732 GIGYF1O75420 1035 aaPredicted RBP14.53□□□□□ -0.08
COL4A1-205ENST00000615732 YBX3P16989 372 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL4A1-205ENST00000615732 CARD14Q9BXL6 1004 aa14.53□□□□□ -0.08
COL4A1-205ENST00000615732 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.08
COL4A1-205ENST00000615732 PCDH11XQ9BZA7 1347 aa14.52□□□□□ -0.08
COL4A1-205ENST00000615732 PCDH11YQ9BZA8 1340 aa14.52□□□□□ -0.08
COL4A1-205ENST00000615732 MSH5O43196 834 aa14.52□□□□□ -0.09
COL4A1-205ENST00000615732 TATP17735 454 aaPredicted RBP14.52□□□□□ -0.09
COL4A1-205ENST00000615732 MSL1Q68DK7 614 aa14.52□□□□□ -0.09
COL4A1-205ENST00000615732 PRKRIP1Q9H875 184 aaPredicted RBP14.52□□□□□ -0.09
COL4A1-205ENST00000615732 CEP350Q5VT06 3117 aa14.51□□□□□ -0.09
COL4A1-205ENST00000615732 PPM1GO15355 546 aaPredicted RBP14.51□□□□□ -0.09
COL4A1-205ENST00000615732 CGNL1Q0VF96 1302 aa14.5□□□□□ -0.09
COL4A1-205ENST00000615732 C4BP0C0L5 1744 aa14.49□□□□□ -0.09
COL4A1-205ENST00000615732 PKD1L3Q7Z443 1732 aa14.49□□□□□ -0.09
COL4A1-205ENST00000615732 PALLDQ8WX93 1383 aa14.49□□□□□ -0.09
COL4A1-205ENST00000615732 CYP27B1O15528 508 aa14.49□□□□□ -0.09
COL4A1-205ENST00000615732 ITGB4P16144 1822 aa14.48□□□□□ -0.09
COL4A1-205ENST00000615732 MPRIPQ6WCQ1 1025 aa14.48□□□□□ -0.09
COL4A1-205ENST00000615732 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
COL4A1-205ENST00000615732 GRIN3BO60391 1043 aa14.47□□□□□ -0.09
COL4A1-205ENST00000615732 NCAPD2Q15021 1401 aa14.47□□□□□ -0.09
COL4A1-205ENST00000615732 ATP10DQ9P241 1426 aa14.47□□□□□ -0.09
COL4A1-205ENST00000615732 UBR3Q6ZT12 1888 aa14.46□□□□□ -0.09
COL4A1-205ENST00000615732 CNGB1Q14028 1251 aaPredicted RBP14.46□□□□□ -0.09
COL4A1-205ENST00000615732 AMIGO3Q86WK7 504 aa14.46□□□□□ -0.09
COL4A1-205ENST00000615732 ANKRD26Q9UPS8 1709 aa14.46□□□□□ -0.1
COL4A1-205ENST00000615732 TNNT2P45379 298 aaPredicted RBP14.45□□□□□ -0.1
COL4A1-205ENST00000615732 SMIM5Q71RC9 77 aa14.45□□□□□ -0.1
COL4A1-205ENST00000615732 MRS2Q9HD23 443 aa14.45□□□□□ -0.1
COL4A1-205ENST00000615732 ADCY9O60503 1353 aa14.45□□□□□ -0.1
COL4A1-205ENST00000615732 MAP2P11137 1827 aaKnown RBP14.44□□□□□ -0.1
COL4A1-205ENST00000615732 CD2APQ9Y5K6 639 aa14.44□□□□□ -0.1
COL4A1-205ENST00000615732 PHF14O94880 888 aa14.43□□□□□ -0.1
COL4A1-205ENST00000615732 RALBP1Q15311 655 aa14.43□□□□□ -0.1
COL4A1-205ENST00000615732 FLAD1Q8NFF5 587 aa14.43□□□□□ -0.1
COL4A1-205ENST00000615732 EYA1Q99502 592 aa14.43□□□□□ -0.1
COL4A1-205ENST00000615732 PANK3Q9H999 370 aa14.43□□□□□ -0.1
COL4A1-205ENST00000615732 PIGBQ92521 554 aa14.42□□□□□ -0.1
COL4A1-205ENST00000615732 AK7Q96M32 723 aa14.42□□□□□ -0.1
COL4A1-205ENST00000615732 POLKQ9UBT6 870 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms