RNA–Protein interactions for RNA: ENST00000615596.1

GTF2I-216, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 717 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-216ENST00000615596 BCL9O00512 1426 aa18.71■□□□□ 0.59
GTF2I-216ENST00000615596 MEGF6O75095 1541 aa18.7■□□□□ 0.58
GTF2I-216ENST00000615596 ZEB1P37275 1124 aaPredicted RBP18.7■□□□□ 0.58
GTF2I-216ENST00000615596 EIF4A2Q14240 407 aaKnown RBP18.7■□□□□ 0.58
GTF2I-216ENST00000615596 TNS1Q9HBL0 1735 aaKnown RBP18.7■□□□□ 0.58
GTF2I-216ENST00000615596 APBA3O96018 575 aa18.69■□□□□ 0.58
GTF2I-216ENST00000615596 CACNB1Q02641 598 aaPredicted RBP18.69■□□□□ 0.58
GTF2I-216ENST00000615596 EN1Q05925 392 aaPredicted RBP18.69■□□□□ 0.58
GTF2I-216ENST00000615596 RAPGEF4Q8WZA2 1011 aa18.69■□□□□ 0.58
GTF2I-216ENST00000615596 EYA1Q99502 592 aa18.69■□□□□ 0.58
GTF2I-216ENST00000615596 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
GTF2I-216ENST00000615596 NCAPD2Q15021 1401 aa18.67■□□□□ 0.58
GTF2I-216ENST00000615596 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
GTF2I-216ENST00000615596 CNGB1Q14028 1251 aaPredicted RBP18.67■□□□□ 0.58
GTF2I-216ENST00000615596 PTF1AQ7RTS3 328 aa18.67■□□□□ 0.58
GTF2I-216ENST00000615596 DDX54Q8TDD1 881 aaKnown RBP18.67■□□□□ 0.58
GTF2I-216ENST00000615596 SBF2Q86WG5 1849 aa18.66■□□□□ 0.58
GTF2I-216ENST00000615596 BCL11BQ9C0K0 894 aaPredicted RBP18.66■□□□□ 0.58
GTF2I-216ENST00000615596 MTHFSP49914 203 aa18.65■□□□□ 0.58
GTF2I-216ENST00000615596 CAMKK2Q96RR4 588 aa18.65■□□□□ 0.58
GTF2I-216ENST00000615596 EZH2Q15910 746 aaKnown RBP18.64■□□□□ 0.57
GTF2I-216ENST00000615596 KCNQ2O43526 872 aa18.63■□□□□ 0.57
GTF2I-216ENST00000615596 U3KPZ7 1027 aaPredicted RBP18.63■□□□□ 0.57
GTF2I-216ENST00000615596 IGSF1Q8N6C5 1336 aa18.63■□□□□ 0.57
GTF2I-216ENST00000615596 ACSBG1Q96GR2 724 aa18.62■□□□□ 0.57
GTF2I-216ENST00000615596 SHANK3Q9BYB0 1731 aa18.61■□□□□ 0.57
GTF2I-216ENST00000615596 PARD3Q8TEW0 1356 aa18.61■□□□□ 0.57
GTF2I-216ENST00000615596 IL13P35225 146 aa18.61■□□□□ 0.57
GTF2I-216ENST00000615596 PCDH11XQ9BZA7 1347 aa18.59■□□□□ 0.57
GTF2I-216ENST00000615596 PCDH11YQ9BZA8 1340 aa18.59■□□□□ 0.57
GTF2I-216ENST00000615596 PLSCR1O15162 318 aa18.59■□□□□ 0.57
GTF2I-216ENST00000615596 NHSQ6T4R5 1651 aa18.58■□□□□ 0.57
GTF2I-216ENST00000615596 CYP27B1O15528 508 aa18.58■□□□□ 0.56
GTF2I-216ENST00000615596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.58■□□□□ 0.564e-9■□□□□ 10.5
GTF2I-216ENST00000615596 SPG7Q9UQ90 795 aa18.58■□□□□ 0.56
GTF2I-216ENST00000615596 AEBP1Q8IUX7 1158 aa18.57■□□□□ 0.56
GTF2I-216ENST00000615596 DDX10Q13206 875 aaKnown RBP18.56■□□□□ 0.56
GTF2I-216ENST00000615596 PKD1L3Q7Z443 1732 aa18.56■□□□□ 0.56
GTF2I-216ENST00000615596 PLEKHG2Q9H7P9 1386 aa18.55■□□□□ 0.56
GTF2I-216ENST00000615596 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
GTF2I-216ENST00000615596 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
GTF2I-216ENST00000615596 SULT6B1Q6IMI4 303 aa18.55■□□□□ 0.56
GTF2I-216ENST00000615596 SRCAPQ6ZRS2 3230 aa18.54■□□□□ 0.56
GTF2I-216ENST00000615596 PPP2R1AP30153 589 aa18.54■□□□□ 0.56
GTF2I-216ENST00000615596 PROM2Q8N271 834 aa18.54■□□□□ 0.56
GTF2I-216ENST00000615596 SYTL4Q96C24 671 aaPredicted RBP18.54■□□□□ 0.56
GTF2I-216ENST00000615596 KAT6BQ8WYB5 2073 aa18.54■□□□□ 0.56
GTF2I-216ENST00000615596 KDRP35968 1356 aa18.54■□□□□ 0.56
GTF2I-216ENST00000615596 RREB1Q92766 1687 aa18.54■□□□□ 0.56
GTF2I-216ENST00000615596 COL3A1P02461 1466 aaPredicted RBP18.53■□□□□ 0.56
GTF2I-216ENST00000615596 RGPD3A6NKT7 1758 aaPredicted RBP18.53■□□□□ 0.56
GTF2I-216ENST00000615596 RGPD4Q7Z3J3 1758 aa18.53■□□□□ 0.56
GTF2I-216ENST00000615596 NKX1-1Q15270 411 aaPredicted RBP18.52■□□□□ 0.56
GTF2I-216ENST00000615596 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.55
GTF2I-216ENST00000615596 BTAF1O14981 1849 aa18.51■□□□□ 0.55
GTF2I-216ENST00000615596 PHKG2P15735 406 aa18.51■□□□□ 0.55
GTF2I-216ENST00000615596 TXNRD1Q16881 649 aa18.51■□□□□ 0.55
GTF2I-216ENST00000615596 PLEKHO1Q53GL0 409 aaPredicted RBP18.51■□□□□ 0.55
GTF2I-216ENST00000615596 IFNL2Q8IZJ0 200 aa18.51■□□□□ 0.55
GTF2I-216ENST00000615596 FOXD4L1Q9NU39 408 aa18.51■□□□□ 0.55
GTF2I-216ENST00000615596 NUP188Q5SRE5 1749 aa18.5■□□□□ 0.55
GTF2I-216ENST00000615596 PSDA5PKW4 1024 aaPredicted RBP18.5■□□□□ 0.55
GTF2I-216ENST00000615596 AMOTQ4VCS5 1084 aa18.5■□□□□ 0.55
GTF2I-216ENST00000615596 CFAP53Q96M91 514 aa18.5■□□□□ 0.55
GTF2I-216ENST00000615596 HMOX1P09601 288 aa18.49■□□□□ 0.55
GTF2I-216ENST00000615596 R3HDM1Q15032 1099 aaKnown RBP18.49■□□□□ 0.55
GTF2I-216ENST00000615596 NBPF14Q5TI25 921 aa18.49■□□□□ 0.55
GTF2I-216ENST00000615596 U2SURPO15042 1029 aaKnown RBP18.47■□□□□ 0.55
GTF2I-216ENST00000615596 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
GTF2I-216ENST00000615596 MPRIPQ6WCQ1 1025 aa18.46■□□□□ 0.55
GTF2I-216ENST00000615596 TOGARAM1Q9Y4F4 1720 aa18.46■□□□□ 0.55
GTF2I-216ENST00000615596 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
GTF2I-216ENST00000615596 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
GTF2I-216ENST00000615596 RALBP1Q15311 655 aa18.44■□□□□ 0.54
GTF2I-216ENST00000615596 LRRC4BQ9NT99 713 aa18.44■□□□□ 0.54
GTF2I-216ENST00000615596 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
GTF2I-216ENST00000615596 SLC27A3Q5K4L6 730 aa18.43■□□□□ 0.54
GTF2I-216ENST00000615596 PIGBQ92521 554 aa18.43■□□□□ 0.54
GTF2I-216ENST00000615596 DCAF5Q96JK2 942 aa18.43■□□□□ 0.54
GTF2I-216ENST00000615596 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
GTF2I-216ENST00000615596 ITGB4P16144 1822 aa18.42■□□□□ 0.54
GTF2I-216ENST00000615596 ERVV-2B6SEH9 535 aa18.41■□□□□ 0.54
GTF2I-216ENST00000615596 TMOD3Q9NYL9 352 aa18.41■□□□□ 0.54
GTF2I-216ENST00000615596 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
GTF2I-216ENST00000615596 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
GTF2I-216ENST00000615596 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
GTF2I-216ENST00000615596 KCNQ4P56696 695 aa18.4■□□□□ 0.54
GTF2I-216ENST00000615596 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
GTF2I-216ENST00000615596 AKAP4Q5JQC9 854 aa18.4■□□□□ 0.54
GTF2I-216ENST00000615596 STK32BQ9NY57 414 aa18.4■□□□□ 0.54
GTF2I-216ENST00000615596 U2AF1L5P0DN76 240 aaPredicted RBP18.39■□□□□ 0.53
GTF2I-216ENST00000615596 U2AF1Q01081 240 aaKnown RBP eCLIP18.39■□□□□ 0.53
GTF2I-216ENST00000615596 SLC15A2Q16348 729 aa18.39■□□□□ 0.53
GTF2I-216ENST00000615596 SMARCC1Q92922 1105 aaPredicted RBP18.39■□□□□ 0.53
GTF2I-216ENST00000615596 RSPH6AQ9H0K4 717 aa18.39■□□□□ 0.53
GTF2I-216ENST00000615596 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
GTF2I-216ENST00000615596 LY75O60449 1722 aa18.39■□□□□ 0.53
GTF2I-216ENST00000615596 PALLDQ8WX93 1383 aa18.39■□□□□ 0.53
GTF2I-216ENST00000615596 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
GTF2I-216ENST00000615596 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms