RNA–Protein interactions for RNA: ENST00000614498.4

ARCN1-205, Transcript of archain 1, humanhuman

TSL 1 (best) BASIC

Gene ARCN1, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-205ENST00000614498 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
ARCN1-205ENST00000614498 GLI3P10071 1580 aa12.42□□□□□ -0.42
ARCN1-205ENST00000614498 NRKQ7Z2Y5 1582 aa12.42□□□□□ -0.42
ARCN1-205ENST00000614498 FAM83GA6ND36 823 aa12.41□□□□□ -0.42
ARCN1-205ENST00000614498 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
ARCN1-205ENST00000614498 RSPH6AQ9H0K4 717 aa12.41□□□□□ -0.42
ARCN1-205ENST00000614498 USP6P35125 1406 aa12.4□□□□□ -0.42
ARCN1-205ENST00000614498 RGPD5Q99666 1765 aa12.4□□□□□ -0.42
ARCN1-205ENST00000614498 CT47B1P0C2W7 299 aaPredicted RBP12.4□□□□□ -0.42
ARCN1-205ENST00000614498 U2AF1L5P0DN76 240 aaPredicted RBP12.4□□□□□ -0.42
ARCN1-205ENST00000614498 U2AF1Q01081 240 aaKnown RBP eCLIP12.4□□□□□ -0.42
ARCN1-205ENST00000614498 FTSJ3Q8IY81 847 aaKnown RBP12.4□□□□□ -0.42
ARCN1-205ENST00000614498 LRP5O75197 1615 aa12.39□□□□□ -0.43
ARCN1-205ENST00000614498 EIF5BO60841 1220 aaKnown RBP12.39□□□□□ -0.43
ARCN1-205ENST00000614498 C22orf23Q9BZE7 217 aa12.39□□□□□ -0.43
ARCN1-205ENST00000614498 SSH2Q76I76 1423 aa12.39□□□□□ -0.43
ARCN1-205ENST00000614498 MCM4P33991 863 aa12.38□□□□□ -0.43
ARCN1-205ENST00000614498 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
ARCN1-205ENST00000614498 UNC5CLQ8IV45 518 aa12.38□□□□□ -0.43
ARCN1-205ENST00000614498 ABTB2Q8N961 1025 aa12.38□□□□□ -0.43
ARCN1-205ENST00000614498 SPRYD3Q8NCJ5 442 aa12.38□□□□□ -0.43
ARCN1-205ENST00000614498 CD163L1Q9NR16 1453 aa12.38□□□□□ -0.43
ARCN1-205ENST00000614498 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
ARCN1-205ENST00000614498 MFAP1P55081 439 aaKnown RBP12.37□□□□□ -0.43
ARCN1-205ENST00000614498 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
ARCN1-205ENST00000614498 GJD4Q96KN9 370 aaPredicted RBP12.37□□□□□ -0.43
ARCN1-205ENST00000614498 CHMP5Q9NZZ3 219 aa12.37□□□□□ -0.43
ARCN1-205ENST00000614498 NSD2O96028 1365 aa12.37□□□□□ -0.43
ARCN1-205ENST00000614498 GOLGA6L3A6NEY3 463 aa12.37□□□□□ -0.43
ARCN1-205ENST00000614498 TSR2Q969E8 191 aaKnown RBP12.37□□□□□ -0.43
ARCN1-205ENST00000614498 RRAGDQ9NQL2 400 aaPredicted RBP12.37□□□□□ -0.43
ARCN1-205ENST00000614498 SMC4Q9NTJ3 1288 aa12.37□□□□□ -0.43
ARCN1-205ENST00000614498 LMO7Q8WWI1 1683 aa12.37□□□□□ -0.43
ARCN1-205ENST00000614498 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
ARCN1-205ENST00000614498 FSD2A1L4K1 749 aa12.36□□□□□ -0.43
ARCN1-205ENST00000614498 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
ARCN1-205ENST00000614498 EXOSC9Q06265 439 aaKnown RBP12.36□□□□□ -0.43
ARCN1-205ENST00000614498 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
ARCN1-205ENST00000614498 ANKRD36BQ8N2N9 1353 aa12.36□□□□□ -0.43
ARCN1-205ENST00000614498 XRCC6P12956 609 aaKnown RBP eCLIP12.35□□□□□ -0.43
ARCN1-205ENST00000614498 TRIM27P14373 513 aa12.35□□□□□ -0.43
ARCN1-205ENST00000614498 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
ARCN1-205ENST00000614498 BTG4Q9NY30 223 aa12.35□□□□□ -0.43
ARCN1-205ENST00000614498 COL18A1P39060 1754 aa12.35□□□□□ -0.43
ARCN1-205ENST00000614498 SLIT3O75094 1523 aa12.35□□□□□ -0.43
ARCN1-205ENST00000614498 LTN1O94822 1766 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 USP54Q70EL1 1684 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 ATF7IPQ6VMQ6 1270 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 ITPRIPQ8IWB1 547 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 SSH1Q8WYL5 1049 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 PRDM11Q9NQV5 511 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 TMPOP42166 694 aaKnown RBP12.34□□□□□ -0.43
ARCN1-205ENST00000614498 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 CAMTA1Q9Y6Y1 1673 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
ARCN1-205ENST00000614498 NLRP6P59044 892 aa12.33□□□□□ -0.44
ARCN1-205ENST00000614498 VPS72Q15906 364 aa12.33□□□□□ -0.44
ARCN1-205ENST00000614498 GZF1Q9H116 711 aaPredicted RBP12.33□□□□□ -0.44
ARCN1-205ENST00000614498 NOB1Q9ULX3 412 aaKnown RBP12.33□□□□□ -0.44
ARCN1-205ENST00000614498 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
ARCN1-205ENST00000614498 TRAK2O60296 914 aa12.33□□□□□ -0.44
ARCN1-205ENST00000614498 SF3B2Q13435 895 aaKnown RBP12.33□□□□□ -0.44
ARCN1-205ENST00000614498 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
ARCN1-205ENST00000614498 U2SURPO15042 1029 aaKnown RBP12.32□□□□□ -0.44
ARCN1-205ENST00000614498 GCP02774 474 aa12.32□□□□□ -0.44
ARCN1-205ENST00000614498 HSCBQ8IWL3 235 aa12.32□□□□□ -0.44
ARCN1-205ENST00000614498 ARXQ96QS3 562 aa12.32□□□□□ -0.44
ARCN1-205ENST00000614498 CCDC9Q9Y3X0 531 aaKnown RBP12.32□□□□□ -0.44
ARCN1-205ENST00000614498 IL16Q14005 1332 aa12.32□□□□□ -0.44
ARCN1-205ENST00000614498 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
ARCN1-205ENST00000614498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
ARCN1-205ENST00000614498 TMEM57Q8N5G2 664 aa12.31□□□□□ -0.44
ARCN1-205ENST00000614498 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
ARCN1-205ENST00000614498 NFAT5O94916 1531 aa12.3□□□□□ -0.44
ARCN1-205ENST00000614498 CPDO75976 1380 aa12.3□□□□□ -0.44
ARCN1-205ENST00000614498 IPO8O15397 1037 aaKnown RBP12.3□□□□□ -0.44
ARCN1-205ENST00000614498 RBM25P49756 843 aaKnown RBP12.3□□□□□ -0.44
ARCN1-205ENST00000614498 NUCB1Q02818 461 aa12.3□□□□□ -0.44
ARCN1-205ENST00000614498 PANK2Q9BZ23 570 aa12.3□□□□□ -0.44
ARCN1-205ENST00000614498 THSD7AQ9UPZ6 1657 aa12.3□□□□□ -0.44
ARCN1-205ENST00000614498 KIF20BQ96Q89 1820 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 DDX11L8A8MPP1 907 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 NME9Q86XW9 330 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 UBE2Q2Q8WVN8 375 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 STRN4Q9NRL3 753 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 WNK3Q9BYP7 1800 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 SOX12O15370 315 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 DDIT3P35638 169 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 MRE11P49959 708 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 RIPK4P57078 832 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 SNX21Q969T3 373 aa12.29□□□□□ -0.44
ARCN1-205ENST00000614498 FAM98CQ17RN3 349 aaKnown RBP12.28□□□□□ -0.44
ARCN1-205ENST00000614498 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
ARCN1-205ENST00000614498 GGNBP2Q9H3C7 697 aa12.28□□□□□ -0.44
ARCN1-205ENST00000614498 SPATA31A5Q5VU36 1347 aa12.28□□□□□ -0.44
ARCN1-205ENST00000614498 SPATA31A7Q8IWB4 1347 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms