RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 CHRNA2Q15822 529 aa22.92■■□□□ 1.26
GEN1-208ENST00000614478 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.92■■□□□ 1.26
GEN1-208ENST00000614478 EXOSC9Q06265 439 aaKnown RBP22.91■■□□□ 1.26
GEN1-208ENST00000614478 EXOC6Q8TAG9 804 aa22.91■■□□□ 1.26
GEN1-208ENST00000614478 LAS1LQ9Y4W2 734 aaKnown RBP22.91■■□□□ 1.26
GEN1-208ENST00000614478 NRAPQ86VF7 1730 aa22.91■■□□□ 1.26
GEN1-208ENST00000614478 RARSP54136 660 aaKnown RBP22.9■■□□□ 1.26
GEN1-208ENST00000614478 MTHFSDQ2M296 383 aaKnown RBP22.9■■□□□ 1.26
GEN1-208ENST00000614478 FNBP4Q8N3X1 1017 aaPredicted RBP22.9■■□□□ 1.26
GEN1-208ENST00000614478 CAMTA1Q9Y6Y1 1673 aa22.9■■□□□ 1.26
GEN1-208ENST00000614478 CT47B1P0C2W7 299 aaPredicted RBP22.9■■□□□ 1.26
GEN1-208ENST00000614478 DCTN1Q14203 1278 aa22.9■■□□□ 1.26
GEN1-208ENST00000614478 IFT57Q9NWB7 429 aa22.9■■□□□ 1.26
GEN1-208ENST00000614478 C20orf194Q5TEA3 1177 aa22.89■■□□□ 1.25
GEN1-208ENST00000614478 NBPF6Q5VWK0 638 aa22.89■■□□□ 1.25
GEN1-208ENST00000614478 USHBP1Q8N6Y0 703 aa22.89■■□□□ 1.25
GEN1-208ENST00000614478 NBPF4Q96M43 638 aa22.89■■□□□ 1.25
GEN1-208ENST00000614478 GNAI1P63096 354 aa22.88■■□□□ 1.25
GEN1-208ENST00000614478 B4GALNT3Q6L9W6 998 aa22.88■■□□□ 1.25
GEN1-208ENST00000614478 BTG4Q9NY30 223 aa22.88■■□□□ 1.25
GEN1-208ENST00000614478 AFF2P51816 1311 aa22.88■■□□□ 1.25
GEN1-208ENST00000614478 ZNF853P0CG23 659 aa22.88■■□□□ 1.25
GEN1-208ENST00000614478 GAS2L2Q8NHY3 880 aa22.88■■□□□ 1.25
GEN1-208ENST00000614478 AXIN2Q9Y2T1 843 aa22.88■■□□□ 1.25
GEN1-208ENST00000614478 ANKRD24Q8TF21 1146 aa22.87■■□□□ 1.25
GEN1-208ENST00000614478 RGPD2P0DJD1 1756 aa22.86■■□□□ 1.25
GEN1-208ENST00000614478 CRBNQ96SW2 442 aa22.86■■□□□ 1.25
GEN1-208ENST00000614478 BCL9LQ86UU0 1499 aa22.86■■□□□ 1.25
GEN1-208ENST00000614478 CFAP44Q96MT7 982 aa22.85■■□□□ 1.25
GEN1-208ENST00000614478 COL5A2P05997 1499 aaPredicted RBP22.85■■□□□ 1.25
GEN1-208ENST00000614478 MCM10Q7L590 875 aa22.85■■□□□ 1.25
GEN1-208ENST00000614478 USP21Q9UK80 565 aa22.85■■□□□ 1.25
GEN1-208ENST00000614478 FAM208AQ9UK61 1670 aaKnown RBP22.84■■□□□ 1.25
GEN1-208ENST00000614478 UNC5CLQ8IV45 518 aa22.83■■□□□ 1.25
GEN1-208ENST00000614478 MBIPQ9NS73 344 aa22.83■■□□□ 1.25
GEN1-208ENST00000614478 RTF1Q92541 710 aaKnown RBP22.83■■□□□ 1.24
GEN1-208ENST00000614478 CCDC136Q96JN2 1154 aa22.82■■□□□ 1.24
GEN1-208ENST00000614478 BCL2L13Q9BXK5 485 aa22.82■■□□□ 1.24
GEN1-208ENST00000614478 ZNF772Q68DY9 489 aaPredicted RBP22.81■■□□□ 1.24
GEN1-208ENST00000614478 ERBB3P21860 1342 aa22.81■■□□□ 1.24
GEN1-208ENST00000614478 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
GEN1-208ENST00000614478 HTATSF1O43719 755 aaKnown RBP22.8■■□□□ 1.24
GEN1-208ENST00000614478 EVA1CP58658 441 aa22.8■■□□□ 1.24
GEN1-208ENST00000614478 FRAT1Q92837 279 aaPredicted RBP22.8■■□□□ 1.24
GEN1-208ENST00000614478 STRN4Q9NRL3 753 aa22.79■■□□□ 1.24
GEN1-208ENST00000614478 NCAPD2Q15021 1401 aa22.79■■□□□ 1.24
GEN1-208ENST00000614478 WDR17Q8IZU2 1322 aa22.79■■□□□ 1.24
GEN1-208ENST00000614478 GNAT3A8MTJ3 354 aa22.79■■□□□ 1.24
GEN1-208ENST00000614478 PDE3AQ14432 1141 aa22.78■■□□□ 1.24
GEN1-208ENST00000614478 CRB1P82279 1406 aa22.78■■□□□ 1.24
GEN1-208ENST00000614478 SSH1Q8WYL5 1049 aa22.77■■□□□ 1.24
GEN1-208ENST00000614478 TRPC5Q9UL62 973 aaPredicted RBP22.77■■□□□ 1.24
GEN1-208ENST00000614478 ATRNO75882 1429 aa22.77■■□□□ 1.24
GEN1-208ENST00000614478 CHL1O00533 1208 aa22.77■■□□□ 1.24
GEN1-208ENST00000614478 SMC4Q9NTJ3 1288 aa22.77■■□□□ 1.24
GEN1-208ENST00000614478 MAP3K5Q99683 1374 aa22.76■■□□□ 1.23
GEN1-208ENST00000614478 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
GEN1-208ENST00000614478 VPS72Q15906 364 aa22.76■■□□□ 1.23
GEN1-208ENST00000614478 TSHZ2Q9NRE2 1034 aa22.76■■□□□ 1.23
GEN1-208ENST00000614478 LARP1Q6PKG0 1096 aaKnown RBP22.75■■□□□ 1.23
GEN1-208ENST00000614478 ZNF428Q96B54 188 aa22.75■■□□□ 1.23
GEN1-208ENST00000614478 RGS17Q9UGC6 210 aaPredicted RBP22.75■■□□□ 1.23
GEN1-208ENST00000614478 VAMP4O75379 141 aa22.75■■□□□ 1.23
GEN1-208ENST00000614478 TSPYL6Q8N831 410 aa22.75■■□□□ 1.23
GEN1-208ENST00000614478 QTRT2Q9H974 415 aaKnown RBP22.74■■□□□ 1.23
GEN1-208ENST00000614478 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
GEN1-208ENST00000614478 PLEKHO1Q53GL0 409 aaPredicted RBP22.73■■□□□ 1.23
GEN1-208ENST00000614478 TOM1L2Q6ZVM7 507 aa22.73■■□□□ 1.23
GEN1-208ENST00000614478 C8orf58Q8NAV2 365 aa22.73■■□□□ 1.23
GEN1-208ENST00000614478 ELL2O00472 640 aaPredicted RBP22.73■■□□□ 1.23
GEN1-208ENST00000614478 TWISTNBQ3B726 338 aaPredicted RBP22.73■■□□□ 1.23
GEN1-208ENST00000614478 PANK1Q8TE04 598 aa22.73■■□□□ 1.23
GEN1-208ENST00000614478 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
GEN1-208ENST00000614478 AMOTQ4VCS5 1084 aa22.72■■□□□ 1.23
GEN1-208ENST00000614478 IL17REQ8NFR9 667 aa22.72■■□□□ 1.23
GEN1-208ENST00000614478 SPATA31A5Q5VU36 1347 aa22.72■■□□□ 1.23
GEN1-208ENST00000614478 SPATA31A7Q8IWB4 1347 aa22.72■■□□□ 1.23
GEN1-208ENST00000614478 CCDC9Q9Y3X0 531 aaKnown RBP22.71■■□□□ 1.23
GEN1-208ENST00000614478 GLI3P10071 1580 aa22.71■■□□□ 1.23
GEN1-208ENST00000614478 SPATA31A1Q5TZJ5 1347 aa22.71■■□□□ 1.23
GEN1-208ENST00000614478 ZKSCAN2Q63HK3 967 aa22.71■■□□□ 1.23
GEN1-208ENST00000614478 CARD10Q9BWT7 1032 aa22.71■■□□□ 1.23
GEN1-208ENST00000614478 WNK3Q9BYP7 1800 aa22.7■■□□□ 1.23
GEN1-208ENST00000614478 LRRC37A3O60309 1634 aa22.7■■□□□ 1.22
GEN1-208ENST00000614478 GJD4Q96KN9 370 aaPredicted RBP22.7■■□□□ 1.22
GEN1-208ENST00000614478 MIS18AQ9NYP9 233 aa22.7■■□□□ 1.22
GEN1-208ENST00000614478 TNNQ9UQP3 1299 aa22.7■■□□□ 1.22
GEN1-208ENST00000614478 TSPYL4Q9UJ04 414 aa22.69■■□□□ 1.22
GEN1-208ENST00000614478 ZNF530Q6P9A1 599 aaPredicted RBP22.68■■□□□ 1.22
GEN1-208ENST00000614478 NOB1Q9ULX3 412 aaKnown RBP22.68■■□□□ 1.22
GEN1-208ENST00000614478 COG6Q9Y2V7 657 aa22.68■■□□□ 1.22
GEN1-208ENST00000614478 AKAP4Q5JQC9 854 aa22.68■■□□□ 1.22
GEN1-208ENST00000614478 THRAP3Q9Y2W1 955 aaKnown RBP22.68■■□□□ 1.22
GEN1-208ENST00000614478 KIF16BQ96L93 1317 aa22.67■■□□□ 1.22
GEN1-208ENST00000614478 RLBP1P12271 317 aa22.67■■□□□ 1.22
GEN1-208ENST00000614478 BRPF1P55201 1214 aaPredicted RBP22.67■■□□□ 1.22
GEN1-208ENST00000614478 CLUAP1Q96AJ1 413 aa22.67■■□□□ 1.22
GEN1-208ENST00000614478 USP35Q9P2H5 1018 aa22.67■■□□□ 1.22
GEN1-208ENST00000614478 RBM6P78332 1123 aaKnown RBP22.66■■□□□ 1.22
GEN1-208ENST00000614478 POTEAQ6S8J7 498 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms