RNA–Protein interactions for RNA: ENST00000614337.4

KNL1-213, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 3,211 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-213ENST00000614337 PDLIM2Q96JY6 352 aa8.5□□□□□ -1.05
KNL1-213ENST00000614337 LRRC59Q96AG4 307 aaKnown RBP8.5□□□□□ -1.05
KNL1-213ENST00000614337 STRN4Q9NRL3 753 aa8.5□□□□□ -1.05
KNL1-213ENST00000614337 ZNF330Q9Y3S2 320 aaPredicted RBP8.5□□□□□ -1.05
KNL1-213ENST00000614337 NLRP1Q9C000 1473 aa8.5□□□□□ -1.05
KNL1-213ENST00000614337 UTRNP46939 3433 aa8.49□□□□□ -1.05
KNL1-213ENST00000614337 A0A1W2PP64 1363 aa8.49□□□□□ -1.05
KNL1-213ENST00000614337 DIP2CQ9Y2E4 1556 aa8.49□□□□□ -1.05
KNL1-213ENST00000614337 KLHL40Q2TBA0 621 aa8.49□□□□□ -1.05
KNL1-213ENST00000614337 EIF2AK4Q9P2K8 1649 aaKnown RBP8.49□□□□□ -1.05
KNL1-213ENST00000614337 ERICH4A6NGS2 130 aa8.49□□□□□ -1.05
KNL1-213ENST00000614337 GTF2F1P35269 517 aaKnown RBP eCLIP8.49□□□□□ -1.05
KNL1-213ENST00000614337 CAVIN1Q6NZI2 390 aaKnown RBP8.49□□□□□ -1.05
KNL1-213ENST00000614337 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.05
KNL1-213ENST00000614337 RBSNQ9H1K0 784 aa8.49□□□□□ -1.05
KNL1-213ENST00000614337 CIZ1Q9ULV3 898 aaPredicted RBP8.49□□□□□ -1.05
KNL1-213ENST00000614337 RPGRIP1LQ68CZ1 1315 aa8.49□□□□□ -1.05
KNL1-213ENST00000614337 ZNF521Q96K83 1311 aa8.49□□□□□ -1.05
KNL1-213ENST00000614337 YTHDC2Q9H6S0 1430 aaKnown RBP8.49□□□□□ -1.05
KNL1-213ENST00000614337 CHAF1AQ13111 956 aaPredicted RBP8.48□□□□□ -1.05
KNL1-213ENST00000614337 MCM10Q7L590 875 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 PHACTR3Q96KR7 559 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 KAT6BQ8WYB5 2073 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 DIAPH1O60610 1272 aaKnown RBP8.48□□□□□ -1.05
KNL1-213ENST00000614337 ATF3P18847 181 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 GEMIN8Q9NWZ8 242 aaKnown RBP8.48□□□□□ -1.05
KNL1-213ENST00000614337 ZNF335Q9H4Z2 1342 aaPredicted RBP8.48□□□□□ -1.05
KNL1-213ENST00000614337 PTPRTO14522 1441 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 PLXNC1O60486 1568 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 PPRC1Q5VV67 1664 aaKnown RBP8.48□□□□□ -1.05
KNL1-213ENST00000614337 CAPN2P17655 700 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 RAB3GAP1Q15042 981 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 ZNF692Q9BU19 519 aaPredicted RBP8.48□□□□□ -1.05
KNL1-213ENST00000614337 YY1AP1Q9H869 796 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 FOXD4L1Q9NU39 408 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 TMEM2Q9UHN6 1383 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 NINLQ9Y2I6 1382 aa8.48□□□□□ -1.05
KNL1-213ENST00000614337 RNF17Q9BXT8 1623 aaKnown RBP8.47□□□□□ -1.05
KNL1-213ENST00000614337 ADAMTS2O95450 1211 aa8.47□□□□□ -1.05
KNL1-213ENST00000614337 PSEN1P49768 467 aa8.47□□□□□ -1.05
KNL1-213ENST00000614337 ZNF445P59923 1031 aa8.47□□□□□ -1.05
KNL1-213ENST00000614337 PANK1Q8TE04 598 aa8.47□□□□□ -1.05
KNL1-213ENST00000614337 CCDC9Q9Y3X0 531 aaKnown RBP8.47□□□□□ -1.05
KNL1-213ENST00000614337 IBTKQ9P2D0 1353 aaPredicted RBP8.47□□□□□ -1.05
KNL1-213ENST00000614337 COG6Q9Y2V7 657 aa8.47□□□□□ -1.05
KNL1-213ENST00000614337 LOC102724159A0A0B4J2E5 919 aa8.46□□□□□ -1.05
KNL1-213ENST00000614337 SLFN14P0C7P3 912 aa8.46□□□□□ -1.05
KNL1-213ENST00000614337 PWP2Q15269 919 aaKnown RBP8.46□□□□□ -1.05
KNL1-213ENST00000614337 DUSP27Q5VZP5 1158 aa8.46□□□□□ -1.05
KNL1-213ENST00000614337 KDM4FA0A1W2PPD8 638 aa8.46□□□□□ -1.06
KNL1-213ENST00000614337 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.06
KNL1-213ENST00000614337 GOLGA2Q08379 1002 aa8.46□□□□□ -1.06
KNL1-213ENST00000614337 NOLC1Q14978 699 aaKnown RBP eCLIP8.46□□□□□ -1.06
KNL1-213ENST00000614337 ZSCAN23Q3MJ62 389 aa8.46□□□□□ -1.06
KNL1-213ENST00000614337 DIAPH3Q9NSV4 1193 aa8.46□□□□□ -1.06
KNL1-213ENST00000614337 ERVK-7P63135 1459 aa8.46□□□□□ -1.06
KNL1-213ENST00000614337 HSP90B1P14625 803 aaKnown RBP8.46□□□□□ -1.06
KNL1-213ENST00000614337 EFCC1Q9HA90 598 aa8.46□□□□□ -1.06
KNL1-213ENST00000614337 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.06
KNL1-213ENST00000614337 POLKQ9UBT6 870 aa8.46□□□□□ -1.06
KNL1-213ENST00000614337 TULP2O00295 520 aa8.45□□□□□ -1.06
KNL1-213ENST00000614337 TRMT2AQ8IZ69 625 aaKnown RBP8.45□□□□□ -1.06
KNL1-213ENST00000614337 PHF8Q9UPP1 1060 aa8.45□□□□□ -1.06
KNL1-213ENST00000614337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.45□□□□□ -1.06
KNL1-213ENST00000614337 PIP4K2AP48426 406 aaPredicted RBP8.45□□□□□ -1.06
KNL1-213ENST00000614337 INO80Q9ULG1 1556 aaPredicted RBP8.45□□□□□ -1.06
KNL1-213ENST00000614337 EFCAB6Q5THR3 1501 aa8.45□□□□□ -1.06
KNL1-213ENST00000614337 GTF2A1P52655 376 aaPredicted RBP8.44□□□□□ -1.06
KNL1-213ENST00000614337 LMOD3Q0VAK6 560 aa8.44□□□□□ -1.06
KNL1-213ENST00000614337 MPNDQ8N594 471 aa8.44□□□□□ -1.06
KNL1-213ENST00000614337 EIF2S2P20042 333 aaKnown RBP8.44□□□□□ -1.06
KNL1-213ENST00000614337 TERF2Q15554 542 aa8.44□□□□□ -1.06
KNL1-213ENST00000614337 RNF214Q8ND24 703 aa8.44□□□□□ -1.06
KNL1-213ENST00000614337 ANXA1P04083 346 aa8.44□□□□□ -1.06
KNL1-213ENST00000614337 MCTP1Q6DN14 999 aa8.44□□□□□ -1.06
KNL1-213ENST00000614337 SMC5Q8IY18 1101 aa8.44□□□□□ -1.06
KNL1-213ENST00000614337 PPIP5K1Q6PFW1 1433 aa8.44□□□□□ -1.06
KNL1-213ENST00000614337 SSFA2P28290 1259 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 PIBF1Q8WXW3 757 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 A2ML1A8K2U0 1454 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 SETD1BQ9UPS6 1966 aaKnown RBP8.43□□□□□ -1.06
KNL1-213ENST00000614337 SYNMO15061 1565 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 PIK3C2GO75747 1445 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 EXOSC9Q06265 439 aaKnown RBP8.43□□□□□ -1.06
KNL1-213ENST00000614337 SLC4A10Q6U841 1118 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 BANK1Q8NDB2 785 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 SYTL4Q96C24 671 aaPredicted RBP8.43□□□□□ -1.06
KNL1-213ENST00000614337 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 FEZ2Q9UHY8 353 aaPredicted RBP8.43□□□□□ -1.06
KNL1-213ENST00000614337 UNC13BO14795 1591 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 TRPM2O94759 1503 aa8.43□□□□□ -1.06
KNL1-213ENST00000614337 BAG4O95429 457 aaKnown RBP8.42□□□□□ -1.06
KNL1-213ENST00000614337 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.42□□□□□ -1.06
KNL1-213ENST00000614337 RSPH14Q9UHP6 348 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 FBXO3Q9UK99 471 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 NKTRP30414 1462 aaKnown RBP8.42□□□□□ -1.06
KNL1-213ENST00000614337 IQGAP3Q86VI3 1631 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 DDIT3P35638 169 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
KNL1-213ENST00000614337 TTC21BQ7Z4L5 1316 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms