RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 SPINK5Q9NQ38 1064 aaPredicted RBP24.56■■□□□ 1.52
CHTOP-207ENST00000614256 USP35Q9P2H5 1018 aa24.56■■□□□ 1.52
CHTOP-207ENST00000614256 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.55■■□□□ 1.52
CHTOP-207ENST00000614256 GAS2L2Q8NHY3 880 aa24.55■■□□□ 1.52
CHTOP-207ENST00000614256 SHANK3Q9BYB0 1731 aa24.54■■□□□ 1.52
CHTOP-207ENST00000614256 THUMPD2Q9BTF0 503 aaKnown RBP24.54■■□□□ 1.52
CHTOP-207ENST00000614256 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
CHTOP-207ENST00000614256 OVOS2A0A0G2JMS6 1433 aa24.53■■□□□ 1.52
CHTOP-207ENST00000614256 GOLGA2Q08379 1002 aa24.53■■□□□ 1.52
CHTOP-207ENST00000614256 DCTN1Q14203 1278 aa24.53■■□□□ 1.52
CHTOP-207ENST00000614256 FNBP4Q8N3X1 1017 aaPredicted RBP24.53■■□□□ 1.52
CHTOP-207ENST00000614256 PDE3BQ13370 1112 aa24.52■■□□□ 1.52
CHTOP-207ENST00000614256 PLEKHO1Q53GL0 409 aaPredicted RBP24.52■■□□□ 1.52
CHTOP-207ENST00000614256 MEX3CQ5U5Q3 659 aaKnown RBP24.52■■□□□ 1.52
CHTOP-207ENST00000614256 UNC5CLQ8IV45 518 aa24.51■■□□□ 1.51
CHTOP-207ENST00000614256 AMOTQ4VCS5 1084 aa24.51■■□□□ 1.51
CHTOP-207ENST00000614256 WDR63Q8IWG1 891 aa24.51■■□□□ 1.51
CHTOP-207ENST00000614256 ZNF530Q6P9A1 599 aaPredicted RBP24.5■■□□□ 1.51
CHTOP-207ENST00000614256 MCM10Q7L590 875 aa24.5■■□□□ 1.51
CHTOP-207ENST00000614256 MAP3K5Q99683 1374 aa24.5■■□□□ 1.51
CHTOP-207ENST00000614256 SPATA31A1Q5TZJ5 1347 aa24.5■■□□□ 1.51
CHTOP-207ENST00000614256 DISP2A7MBM2 1401 aa24.5■■□□□ 1.51
CHTOP-207ENST00000614256 LRRC37A3O60309 1634 aa24.5■■□□□ 1.51
CHTOP-207ENST00000614256 IL2RBP14784 551 aa24.49■■□□□ 1.51
CHTOP-207ENST00000614256 SLFN5Q08AF3 891 aa24.49■■□□□ 1.51
CHTOP-207ENST00000614256 SPATA31A5Q5VU36 1347 aa24.48■■□□□ 1.51
CHTOP-207ENST00000614256 SPATA31A7Q8IWB4 1347 aa24.48■■□□□ 1.51
CHTOP-207ENST00000614256 PLEKHG2Q9H7P9 1386 aa24.48■■□□□ 1.51
CHTOP-207ENST00000614256 LMOD3Q0VAK6 560 aa24.48■■□□□ 1.51
CHTOP-207ENST00000614256 GNAT3A8MTJ3 354 aa24.47■■□□□ 1.51
CHTOP-207ENST00000614256 USP21Q9UK80 565 aa24.47■■□□□ 1.51
CHTOP-207ENST00000614256 AFF2P51816 1311 aa24.47■■□□□ 1.51
CHTOP-207ENST00000614256 TRMT2AQ8IZ69 625 aaKnown RBP24.47■■□□□ 1.51
CHTOP-207ENST00000614256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.47■■□□□ 1.51
CHTOP-207ENST00000614256 DUSP27Q5VZP5 1158 aa24.46■■□□□ 1.51
CHTOP-207ENST00000614256 ADAMTS7Q9UKP4 1686 aa24.46■■□□□ 1.51
CHTOP-207ENST00000614256 SCN11AQ9UI33 1791 aa24.45■■□□□ 1.51
CHTOP-207ENST00000614256 SPG7Q9UQ90 795 aa24.45■■□□□ 1.5
CHTOP-207ENST00000614256 VPS72Q15906 364 aa24.45■■□□□ 1.5
CHTOP-207ENST00000614256 AKAP4Q5JQC9 854 aa24.45■■□□□ 1.5
CHTOP-207ENST00000614256 IL17REQ8NFR9 667 aa24.45■■□□□ 1.5
CHTOP-207ENST00000614256 CCDC9Q9Y3X0 531 aaKnown RBP24.45■■□□□ 1.5
CHTOP-207ENST00000614256 E9PSI1 815 aa24.44■■□□□ 1.5
CHTOP-207ENST00000614256 CYP27B1O15528 508 aa24.43■■□□□ 1.5
CHTOP-207ENST00000614256 HTATSF1O43719 755 aaKnown RBP24.43■■□□□ 1.5
CHTOP-207ENST00000614256 RTF1Q92541 710 aaKnown RBP24.43■■□□□ 1.5
CHTOP-207ENST00000614256 IL16Q14005 1332 aa24.43■■□□□ 1.5
CHTOP-207ENST00000614256 ZCRB1Q8TBF4 217 aaKnown RBP24.42■■□□□ 1.5
CHTOP-207ENST00000614256 PHKG2P15735 406 aa24.42■■□□□ 1.5
CHTOP-207ENST00000614256 C1orf141Q5JVX7 400 aa24.42■■□□□ 1.5
CHTOP-207ENST00000614256 LGR6Q9HBX8 967 aa24.42■■□□□ 1.5
CHTOP-207ENST00000614256 MPRIPQ6WCQ1 1025 aa24.41■■□□□ 1.5
CHTOP-207ENST00000614256 ILDR1Q86SU0 546 aaPredicted RBP24.41■■□□□ 1.5
CHTOP-207ENST00000614256 TSR2Q969E8 191 aaKnown RBP24.41■■□□□ 1.5
CHTOP-207ENST00000614256 THRAP3Q9Y2W1 955 aaKnown RBP24.41■■□□□ 1.5
CHTOP-207ENST00000614256 GLI3P10071 1580 aa24.41■■□□□ 1.5
CHTOP-207ENST00000614256 SIPA1L3O60292 1781 aaPredicted RBP24.4■■□□□ 1.5
CHTOP-207ENST00000614256 CEMIPQ8WUJ3 1361 aa24.4■■□□□ 1.5
CHTOP-207ENST00000614256 KDM6AO15550 1401 aaPredicted RBP24.4■■□□□ 1.5
CHTOP-207ENST00000614256 ZNF853P0CG23 659 aa24.39■■□□□ 1.49
CHTOP-207ENST00000614256 IFNL2Q8IZJ0 200 aa24.39■■□□□ 1.49
CHTOP-207ENST00000614256 LAS1LQ9Y4W2 734 aaKnown RBP24.39■■□□□ 1.49
CHTOP-207ENST00000614256 PCDH11XQ9BZA7 1347 aa24.38■■□□□ 1.49
CHTOP-207ENST00000614256 PCDH11YQ9BZA8 1340 aa24.38■■□□□ 1.49
CHTOP-207ENST00000614256 FANCIQ9NVI1 1328 aa24.38■■□□□ 1.49
CHTOP-207ENST00000614256 ATRNO75882 1429 aa24.38■■□□□ 1.49
CHTOP-207ENST00000614256 CALD1Q05682 793 aaKnown RBP24.38■■□□□ 1.49
CHTOP-207ENST00000614256 BARGINQ6ZT62 677 aa24.38■■□□□ 1.49
CHTOP-207ENST00000614256 RNMTO43148 476 aaKnown RBP24.37■■□□□ 1.49
CHTOP-207ENST00000614256 IFT57Q9NWB7 429 aa24.37■■□□□ 1.49
CHTOP-207ENST00000614256 CFAP44Q96MT7 982 aa24.36■■□□□ 1.49
CHTOP-207ENST00000614256 MYH16Q9H6N6 1097 aa24.36■■□□□ 1.49
CHTOP-207ENST00000614256 TNS2Q63HR2 1409 aa24.36■■□□□ 1.49
CHTOP-207ENST00000614256 GNAI1P63096 354 aa24.35■■□□□ 1.49
CHTOP-207ENST00000614256 FAM98CQ17RN3 349 aaKnown RBP24.35■■□□□ 1.49
CHTOP-207ENST00000614256 DDX54Q8TDD1 881 aaKnown RBP24.35■■□□□ 1.49
CHTOP-207ENST00000614256 MBIPQ9NS73 344 aa24.35■■□□□ 1.49
CHTOP-207ENST00000614256 TOGARAM1Q9Y4F4 1720 aa24.35■■□□□ 1.49
CHTOP-207ENST00000614256 THSD7AQ9UPZ6 1657 aa24.35■■□□□ 1.49
CHTOP-207ENST00000614256 CDCA7Q9BWT1 371 aaPredicted RBP24.34■■□□□ 1.49
CHTOP-207ENST00000614256 MIS18AQ9NYP9 233 aa24.34■■□□□ 1.49
CHTOP-207ENST00000614256 CHL1O00533 1208 aa24.33■■□□□ 1.49
CHTOP-207ENST00000614256 KDM3BQ7LBC6 1761 aa24.33■■□□□ 1.49
CHTOP-207ENST00000614256 GJD4Q96KN9 370 aaPredicted RBP24.33■■□□□ 1.48
CHTOP-207ENST00000614256 TRPC5Q9UL62 973 aaPredicted RBP24.32■■□□□ 1.48
CHTOP-207ENST00000614256 EXOC5O00471 708 aa24.31■■□□□ 1.48
CHTOP-207ENST00000614256 MRC1P22897 1456 aa24.31■■□□□ 1.48
CHTOP-207ENST00000614256 DCAF5Q96JK2 942 aa24.31■■□□□ 1.48
CHTOP-207ENST00000614256 EXOSC9Q06265 439 aaKnown RBP24.3■■□□□ 1.48
CHTOP-207ENST00000614256 NKX1-1Q15270 411 aaPredicted RBP24.3■■□□□ 1.48
CHTOP-207ENST00000614256 DDB1Q16531 1140 aa24.3■■□□□ 1.48
CHTOP-207ENST00000614256 QTRT2Q9H974 415 aaKnown RBP24.3■■□□□ 1.48
CHTOP-207ENST00000614256 ITGB4P16144 1822 aa24.3■■□□□ 1.48
CHTOP-207ENST00000614256 KAT6BQ8WYB5 2073 aa24.29■■□□□ 1.48
CHTOP-207ENST00000614256 TAF7Q15545 349 aaPredicted RBP24.29■■□□□ 1.48
CHTOP-207ENST00000614256 HSP90AB1P08238 724 aaKnown RBP24.28■■□□□ 1.48
CHTOP-207ENST00000614256 TEFQ10587 303 aa24.28■■□□□ 1.48
CHTOP-207ENST00000614256 TSPYL4Q9UJ04 414 aa24.27■■□□□ 1.48
CHTOP-207ENST00000614256 DOT1LQ8TEK3 1739 aa24.26■■□□□ 1.47
CHTOP-207ENST00000614256 SLC52A2Q9HAB3 445 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms